Click here to switch to the map view.

The map label for this gene is lemA [H]

Identifier: 91790273

GI number: 91790273

Start: 4689256

End: 4689849

Strand: Reverse

Name: lemA [H]

Synonym: Bpro_4440

Alternate gene names: 91790273

Gene position: 4689849-4689256 (Counterclockwise)

Preceding gene: 91790274

Following gene: 91790272

Centisome position: 90.18

GC content: 65.49

Gene sequence:

>594_bases
ATGTCCCTCAGTAACCTGGTGTCCATCGCCGTGCTCGCCCTGCTGGTCTGCTGGGCGGTGGGGGCGTACAACCGACTGGT
GCGCCTGAAGAATCTCATCGCCAACGCCTTCGGCCAGATCGACGTGCAACTCAAGCGGCGCTATGACCTCATTCCCAATC
TGGTGGAGGCCGCCAAAAAATACCTGCAGCACGAGCAGAGTACGCTGGAGGCGGTGATGGCCGCGCGCAACCAGGCACGT
ACCGCCAGCGATGCGGTACGAAGCCGCCCGGCCAATGCCGCCGCCGTGACCACGCTGGCCGCCGCCGAGCAGGCCCTGGA
CAGCAGCCTCGGGCAGCTGTTCGCGGTGGCCGAGGCCTACCCCGAGCTGAAAGCCGACCAGACCATCCGCGACCTGAGCG
AAGAACTCACCAGTACCGAGAACAAGGTCGGCTTTGCGCGGCAGGCCTATAACGATGCGGTGCTGGACTACAACAACGCA
CAGGGGCAATTCCCGGCCGTGCTGATCGCCCGCGTGTTTGGTTTTGCGCCTTCGGCCATGCTGCGCGCGACGGAGAGCGC
GGCCGAGCGCCAGGCCGTCCGCATCCAGATGTAG

Upstream 100 bases:

>100_bases
CAGAGGTTCTGCCGATCCAGGAAAAAACAGGTAACCTCGCGGCAAGCGCTGGCCTGGCCCCCGGGTTCGCCTACCCATCA
CTCTGCTTCAAGGAAGATCC

Downstream 100 bases:

>100_bases
TTATGGCCCCCACGCTTGTCGCTTCGCGTACTGCGCGAGGCCTTGCAGGCCGCGGCTCGCGAGACGCTTCGCTTCTGTCG
CCCGTCCAAAGCTGCGCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSLSNLVSIAVLALLVCWAVGAYNRLVRLKNLIANAFGQIDVQLKRRYDLIPNLVEAAKKYLQHEQSTLEAVMAARNQAR
TASDAVRSRPANAAAVTTLAAAEQALDSSLGQLFAVAEAYPELKADQTIRDLSEELTSTENKVGFARQAYNDAVLDYNNA
QGQFPAVLIARVFGFAPSAMLRATESAAERQAVRIQM

Sequences:

>Translated_197_residues
MSLSNLVSIAVLALLVCWAVGAYNRLVRLKNLIANAFGQIDVQLKRRYDLIPNLVEAAKKYLQHEQSTLEAVMAARNQAR
TASDAVRSRPANAAAVTTLAAAEQALDSSLGQLFAVAEAYPELKADQTIRDLSEELTSTENKVGFARQAYNDAVLDYNNA
QGQFPAVLIARVFGFAPSAMLRATESAAERQAVRIQM
>Mature_196_residues
SLSNLVSIAVLALLVCWAVGAYNRLVRLKNLIANAFGQIDVQLKRRYDLIPNLVEAAKKYLQHEQSTLEAVMAARNQART
ASDAVRSRPANAAAVTTLAAAEQALDSSLGQLFAVAEAYPELKADQTIRDLSEELTSTENKVGFARQAYNDAVLDYNNAQ
GQFPAVLIARVFGFAPSAMLRATESAAERQAVRIQM

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 21413; Mature: 21281

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSNLVSIAVLALLVCWAVGAYNRLVRLKNLIANAFGQIDVQLKRRYDLIPNLVEAAKK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLQHEQSTLEAVMAARNQARTASDAVRSRPANAAAVTTLAAAEQALDSSLGQLFAVAEAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PELKADQTIRDLSEELTSTENKVGFARQAYNDAVLDYNNAQGQFPAVLIARVFGFAPSAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHCCCHHHH
LRATESAAERQAVRIQM
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLSNLVSIAVLALLVCWAVGAYNRLVRLKNLIANAFGQIDVQLKRRYDLIPNLVEAAKK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLQHEQSTLEAVMAARNQARTASDAVRSRPANAAAVTTLAAAEQALDSSLGQLFAVAEAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PELKADQTIRDLSEELTSTENKVGFARQAYNDAVLDYNNAQGQFPAVLIARVFGFAPSAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHCCCHHHH
LRATESAAERQAVRIQM
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]