| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is htpX [H]
Identifier: 91790272
GI number: 91790272
Start: 4687942
End: 4688949
Strand: Reverse
Name: htpX [H]
Synonym: Bpro_4439
Alternate gene names: 91790272
Gene position: 4688949-4687942 (Counterclockwise)
Preceding gene: 91790273
Following gene: 91790271
Centisome position: 90.17
GC content: 68.06
Gene sequence:
>1008_bases ATGCGTTTCTTTGAACGGCAGGAAGCAGCCCGCGCGCAGACCACGCGGCTGCTGCTGCTCTTTGGCCTGACGGTGCTGGC GCTGGTGCTGGCTGTCAATGCCGCGCTGGCCCTGAGCTGGCGGCTGGTGACGCCGGGCTTCAGTGGCTACCCGGCCTATT TCTTTGCCGTCAACACCGGCATGACCCTGCTGTTCGTGCTGGGCGGCTGGTGGCTGGAGACCTCGGCCTTGCAGGGCGGC GGTGAAAAGCTGGCACGCCGCGCCGGTGCGCGCGAGGCCTGGCCGTCCAGCCGCGCGGCAGAACAGAAGCTGTGCAACAT CGTCAGCGAACTGGCGATTGCCGCCAGCATGAAGCCGCCGGTGCCCATGGTGCTGGACCGGGAAGAGGGCATCAACGCCT TTGCCACCGGCTGGGACGAGGACGACGCGGTCGTGGCCGTCACGCGCGGCGCCCTCGACAAGCTGACGCGTGATGAACTG CAGGGTCTGGTGGCCCACGAATTCAGCCACCTGCGCGAGGGTGATACCCGACTGAACATGCGGCTGGGCGGCATGGTGTT CGGGCTGGAGATGATTTTCAATCTGGGCCGCAGCATGTGCGAGACCGATGACGACGGCCGCCGTTCCTTCATGGCCTTGC CGGGCTTCGCGATCATGGCCACCGGCTCCCTCGGCTGGCTGGCGGGGCGGATGCTGAAGGCCGCGGTGTCGCGTCAGCGC GAGTATCTGGCCGATGCGCGGGCCGTGCAGTTCACGCGCAGCAGAGATGGCCTGGGCGGCGTGCTGCGCAAGGTGGCGGG CGAGCAGGCGCAGGGCCTGGGCATGCGGCGCAGTCTGCACCCGGCGGTACAGCACATGCTGTTGATCAACGCGAACCCGC AGACCCGCTGGTTTGCCACCCACCCGCCTCTGTCCGAGCGCATTCTCCGCATCTATGGCCGCCCCATGGTCGCGCTGCCG GCGCGGTGTGACGATGAGGCGGTCACGCGGCCCGACGCCATCTTCTGA
Upstream 100 bases:
>100_bases ACTGCGTGTAGCTCCCGCGGCCCTGGCTGGTTTGGAGCCTCCGTAGGTCTCCCCGATCGCCTTGAGGTATCGAAGGGTGA GGTGACCCGTGGGAATATGA
Downstream 100 bases:
>100_bases ATCCGGCCAGTACAAGCCATGACTTGTGAATGTGCACGCGGCCCATGATTCGAATGCGGGGCGTGTACACCGCACCAGGT ACTGGATACTCCCTATAGGG
Product: peptidase M48, Ste24p
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MRFFERQEAARAQTTRLLLLFGLTVLALVLAVNAALALSWRLVTPGFSGYPAYFFAVNTGMTLLFVLGGWWLETSALQGG GEKLARRAGAREAWPSSRAAEQKLCNIVSELAIAASMKPPVPMVLDREEGINAFATGWDEDDAVVAVTRGALDKLTRDEL QGLVAHEFSHLREGDTRLNMRLGGMVFGLEMIFNLGRSMCETDDDGRRSFMALPGFAIMATGSLGWLAGRMLKAAVSRQR EYLADARAVQFTRSRDGLGGVLRKVAGEQAQGLGMRRSLHPAVQHMLLINANPQTRWFATHPPLSERILRIYGRPMVALP ARCDDEAVTRPDAIF
Sequences:
>Translated_335_residues MRFFERQEAARAQTTRLLLLFGLTVLALVLAVNAALALSWRLVTPGFSGYPAYFFAVNTGMTLLFVLGGWWLETSALQGG GEKLARRAGAREAWPSSRAAEQKLCNIVSELAIAASMKPPVPMVLDREEGINAFATGWDEDDAVVAVTRGALDKLTRDEL QGLVAHEFSHLREGDTRLNMRLGGMVFGLEMIFNLGRSMCETDDDGRRSFMALPGFAIMATGSLGWLAGRMLKAAVSRQR EYLADARAVQFTRSRDGLGGVLRKVAGEQAQGLGMRRSLHPAVQHMLLINANPQTRWFATHPPLSERILRIYGRPMVALP ARCDDEAVTRPDAIF >Mature_335_residues MRFFERQEAARAQTTRLLLLFGLTVLALVLAVNAALALSWRLVTPGFSGYPAYFFAVNTGMTLLFVLGGWWLETSALQGG GEKLARRAGAREAWPSSRAAEQKLCNIVSELAIAASMKPPVPMVLDREEGINAFATGWDEDDAVVAVTRGALDKLTRDEL QGLVAHEFSHLREGDTRLNMRLGGMVFGLEMIFNLGRSMCETDDDGRRSFMALPGFAIMATGSLGWLAGRMLKAAVSRQR EYLADARAVQFTRSRDGLGGVLRKVAGEQAQGLGMRRSLHPAVQHMLLINANPQTRWFATHPPLSERILRIYGRPMVALP ARCDDEAVTRPDAIF
Specific function: Unknown Function. Overexpression Of A Truncated Form Of The Htpx Protein Leads To An Increase In The Degradation Of Abnormal Proteins. [C]
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M48B family [H]
Homologues:
Organism=Escherichia coli, GI1788133, Length=303, Percent_Identity=29.042904290429, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022919 - InterPro: IPR001915 [H]
Pfam domain/function: PF01435 Peptidase_M48 [H]
EC number: 3.4.24.- [C]
Molecular weight: Translated: 36833; Mature: 36833
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFFERQEAARAQTTRLLLLFGLTVLALVLAVNAALALSWRLVTPGFSGYPAYFFAVNTG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEECCC MTLLFVLGGWWLETSALQGGGEKLARRAGAREAWPSSRAAEQKLCNIVSELAIAASMKPP HHHHHHHHCHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC VPMVLDREEGINAFATGWDEDDAVVAVTRGALDKLTRDELQGLVAHEFSHLREGDTRLNM CCEEEECCCCCCCEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE RLGGMVFGLEMIFNLGRSMCETDDDGRRSFMALPGFAIMATGSLGWLAGRMLKAAVSRQR EHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCEEEEECCCHHHHHHHHHHHHHHHHH EYLADARAVQFTRSRDGLGGVLRKVAGEQAQGLGMRRSLHPAVQHMLLINANPQTRWFAT HHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHCCCCHHHHHHHHHHEEEEECCCCCCEEEC HPPLSERILRIYGRPMVALPARCDDEAVTRPDAIF CCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MRFFERQEAARAQTTRLLLLFGLTVLALVLAVNAALALSWRLVTPGFSGYPAYFFAVNTG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEECCC MTLLFVLGGWWLETSALQGGGEKLARRAGAREAWPSSRAAEQKLCNIVSELAIAASMKPP HHHHHHHHCHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC VPMVLDREEGINAFATGWDEDDAVVAVTRGALDKLTRDELQGLVAHEFSHLREGDTRLNM CCEEEECCCCCCCEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE RLGGMVFGLEMIFNLGRSMCETDDDGRRSFMALPGFAIMATGSLGWLAGRMLKAAVSRQR EHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCEEEEECCCHHHHHHHHHHHHHHHHH EYLADARAVQFTRSRDGLGGVLRKVAGEQAQGLGMRRSLHPAVQHMLLINANPQTRWFAT HHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHCCCCHHHHHHHHHHEEEEECCCCCCEEEC HPPLSERILRIYGRPMVALPARCDDEAVTRPDAIF CCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA