Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790265

Identifier: 91790265

GI number: 91790265

Start: 4679097

End: 4680401

Strand: Direct

Name: 91790265

Synonym: Bpro_4432

Alternate gene names: NA

Gene position: 4679097-4680401 (Clockwise)

Preceding gene: 91790264

Following gene: 91790291

Centisome position: 89.98

GC content: 53.79

Gene sequence:

>1305_bases
ATGACGCGGGTCAGCATCATCCCGGCCTCCTCAAGTATCCCGGCGCTTAGCTCGCTCAAGCCTCGGCAGCGGGGCCCGGG
ATCAATTGAGGCACTTTCAAGTCATCTGATAGCGCTTGCCGAACATCACAGTTGCTCACCATATACGCTCATTCACCAGG
TTCTTATTCCTCCTTCAGAACAGTTGAGTTTGCGCTGGAGAAGAGTTCGATTCAACGAGTCCCAACTTGTCAATGGCTAT
CTTGATGTTGCTCAATACTTGTCAGAAGCGGTAATGAAGTGCAGCCACCGGACAGACATCACGAACTTGACTCTTATTGG
GATGCAGTCATTCTGTGATCCAGTTGGAAAACATGTTTTACGACGCGTGAGGCCTTGGTGCCCTGAGTGCTACCGAGAGG
CGCGAGCCCACGACATACAGCCCTGGGATCCTCTTTACACCTATGTCACTACAACCGCGGTTTGTGTTTGGCATCAGGTG
GCGCTTCGCACAGAGTGTGAAAGGTGCGGGCGTCCCCAGAGATTTGTCCCGAAGCTTCCCTTTCTCGATTTATGCGAGAG
ATGCGGGGCCGATCTGGCCATGCAGGGCAGCCCACCACTGAGGACTGGCCGTACACCTAATGACGAATTATGGTTTTCGA
GGGCGGCAATGCACTTGATCGAAACGCTTCAGAGCGGCGTGCAACTTTCGGCACATAACTTTGCCAAAAATATCCAACTA
CTCATAGACGAACATTTCGGTGGCAATCGACAACAGTTTGCCAAGAAACTTGGAGTCGCGGGATCAGGTCCGAAGAACTG
GATCGACCGGGGTTCACACCCCAGTTGGGCGTCGGTTGCTGATCTGGGCTTTCGGATGGAGATCCCTCCCGCTCAACTCG
CAACCGCTGATCTGCCGATGACGGACCCAACTTATTGGCGCTATGCAAACCGATTGCTCCTCGACGCGCCTCACATCCGT
CCGGCCGCCGAAACGCTTGATGCAGCTCGGGAGGCCTTGAACTCTGCGATCAAAATGGCCCGTGCCAACCCCACCTTACT
GCCTGAAAGTATTGAGGCGGTCACCAAGAAAGCTGGCGTGCGTCGGGATCTTCTCAAGCGCCATTTTCCAGACGAATTTG
CAACGCTGGCAGGGCTAAGATCCAGCGCCGCAAAATCTCTAGCGCTAAGAAATGCTGCTGAACGTAGCGAAAGATTGGCG
TCCGCAATGCAGGACATAGCCACCAGCGGGAAAATGCCCACCTCGCATCGCCTGAAGCTCCAATCAGGGATAAAGATATC
GGATTTAATCCCAAGGCGTAATTAA

Upstream 100 bases:

>100_bases
TCTTCCCGGTTAACTCGTCAGCGGATGCTTCAGCATCTTCAACGGCAAAACGCGGAACCAACCCTGGTGCACGCAACCCG
ATACGCGACGCAGTGCCCCT

Downstream 100 bases:

>100_bases
GGGCTCCGGCTTACCGAGATGCCTGAACACTCATATGGGACCGCCGCTTGAATACACCCCCTGAACACCCTCAGTGGGAT
CGTCTGGCGTGCTTTGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MTRVSIIPASSSIPALSSLKPRQRGPGSIEALSSHLIALAEHHSCSPYTLIHQVLIPPSEQLSLRWRRVRFNESQLVNGY
LDVAQYLSEAVMKCSHRTDITNLTLIGMQSFCDPVGKHVLRRVRPWCPECYREARAHDIQPWDPLYTYVTTTAVCVWHQV
ALRTECERCGRPQRFVPKLPFLDLCERCGADLAMQGSPPLRTGRTPNDELWFSRAAMHLIETLQSGVQLSAHNFAKNIQL
LIDEHFGGNRQQFAKKLGVAGSGPKNWIDRGSHPSWASVADLGFRMEIPPAQLATADLPMTDPTYWRYANRLLLDAPHIR
PAAETLDAAREALNSAIKMARANPTLLPESIEAVTKKAGVRRDLLKRHFPDEFATLAGLRSSAAKSLALRNAAERSERLA
SAMQDIATSGKMPTSHRLKLQSGIKISDLIPRRN

Sequences:

>Translated_434_residues
MTRVSIIPASSSIPALSSLKPRQRGPGSIEALSSHLIALAEHHSCSPYTLIHQVLIPPSEQLSLRWRRVRFNESQLVNGY
LDVAQYLSEAVMKCSHRTDITNLTLIGMQSFCDPVGKHVLRRVRPWCPECYREARAHDIQPWDPLYTYVTTTAVCVWHQV
ALRTECERCGRPQRFVPKLPFLDLCERCGADLAMQGSPPLRTGRTPNDELWFSRAAMHLIETLQSGVQLSAHNFAKNIQL
LIDEHFGGNRQQFAKKLGVAGSGPKNWIDRGSHPSWASVADLGFRMEIPPAQLATADLPMTDPTYWRYANRLLLDAPHIR
PAAETLDAAREALNSAIKMARANPTLLPESIEAVTKKAGVRRDLLKRHFPDEFATLAGLRSSAAKSLALRNAAERSERLA
SAMQDIATSGKMPTSHRLKLQSGIKISDLIPRRN
>Mature_433_residues
TRVSIIPASSSIPALSSLKPRQRGPGSIEALSSHLIALAEHHSCSPYTLIHQVLIPPSEQLSLRWRRVRFNESQLVNGYL
DVAQYLSEAVMKCSHRTDITNLTLIGMQSFCDPVGKHVLRRVRPWCPECYREARAHDIQPWDPLYTYVTTTAVCVWHQVA
LRTECERCGRPQRFVPKLPFLDLCERCGADLAMQGSPPLRTGRTPNDELWFSRAAMHLIETLQSGVQLSAHNFAKNIQLL
IDEHFGGNRQQFAKKLGVAGSGPKNWIDRGSHPSWASVADLGFRMEIPPAQLATADLPMTDPTYWRYANRLLLDAPHIRP
AAETLDAAREALNSAIKMARANPTLLPESIEAVTKKAGVRRDLLKRHFPDEFATLAGLRSSAAKSLALRNAAERSERLAS
AMQDIATSGKMPTSHRLKLQSGIKISDLIPRRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48418; Mature: 48287

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRVSIIPASSSIPALSSLKPRQRGPGSIEALSSHLIALAEHHSCSPYTLIHQVLIPPSE
CCEEEEEECCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCH
QLSLRWRRVRFNESQLVNGYLDVAQYLSEAVMKCSHRTDITNLTLIGMQSFCDPVGKHVL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECHHHHHHHHHHHHH
RRVRPWCPECYREARAHDIQPWDPLYTYVTTTAVCVWHQVALRTECERCGRPQRFVPKLP
HHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
FLDLCERCGADLAMQGSPPLRTGRTPNDELWFSRAAMHLIETLQSGVQLSAHNFAKNIQL
HHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHH
LIDEHFGGNRQQFAKKLGVAGSGPKNWIDRGSHPSWASVADLGFRMEIPPAQLATADLPM
HEECCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHCCCEECCCHHHHCCCCCCC
TDPTYWRYANRLLLDAPHIRPAAETLDAAREALNSAIKMARANPTLLPESIEAVTKKAGV
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
RRDLLKRHFPDEFATLAGLRSSAAKSLALRNAAERSERLASAMQDIATSGKMPTSHRLKL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
QSGIKISDLIPRRN
HCCCCHHHCCCCCC
>Mature Secondary Structure 
TRVSIIPASSSIPALSSLKPRQRGPGSIEALSSHLIALAEHHSCSPYTLIHQVLIPPSE
CEEEEEECCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCH
QLSLRWRRVRFNESQLVNGYLDVAQYLSEAVMKCSHRTDITNLTLIGMQSFCDPVGKHVL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECHHHHHHHHHHHHH
RRVRPWCPECYREARAHDIQPWDPLYTYVTTTAVCVWHQVALRTECERCGRPQRFVPKLP
HHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
FLDLCERCGADLAMQGSPPLRTGRTPNDELWFSRAAMHLIETLQSGVQLSAHNFAKNIQL
HHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHH
LIDEHFGGNRQQFAKKLGVAGSGPKNWIDRGSHPSWASVADLGFRMEIPPAQLATADLPM
HEECCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHCCCEECCCHHHHCCCCCCC
TDPTYWRYANRLLLDAPHIRPAAETLDAAREALNSAIKMARANPTLLPESIEAVTKKAGV
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
RRDLLKRHFPDEFATLAGLRSSAAKSLALRNAAERSERLASAMQDIATSGKMPTSHRLKL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
QSGIKISDLIPRRN
HCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA