| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790242
Identifier: 91790242
GI number: 91790242
Start: 4654959
End: 4656110
Strand: Reverse
Name: 91790242
Synonym: Bpro_4409
Alternate gene names: NA
Gene position: 4656110-4654959 (Counterclockwise)
Preceding gene: 91790243
Following gene: 91790240
Centisome position: 89.54
GC content: 56.51
Gene sequence:
>1152_bases ATGAAACACATCTTCAAGCTGGCAATGCCAGCTTTCTTAAGCTGCGCCGCGATTTTGGCTACTCCATCGGTGCAGGCCAC GCAAATCGTTGTTGGGCAGGTAGCGCCGCTATCTGGGCCCGAGGCCAGCCAGGGGCGTGCGTACGCTGCCGGTATGCAGT TCCTCTTTAACGACATCAATAGGGCCGGCGGCGTGAATGGGCATACCTTCGAGTTGGTGAGTAAGGATGACGGTGGCGGG CCAGAGGATACGGTCGCTATCACCCGCCAATTGCTCACCGAGAATCAGCCGATGGTGTTGGCCGGCTATTTTGGCAACCG CAACATCTCTGAACTTGTGATTGCGGGCTTTCTGGAAAAGGAAAAGCTCGCCTTGGTGGGCTACCGCGCTGCTGAAATCG GCGTTGAGATCCCTCAGCTCTACAACGTAAGGGCAAATTTCCGTACTGAGCTTAGTAAGATCACCGAGCATCTGGCGGCA ATAGGAGTGACGCGCCTGGGTCTCCTCTACGAGGAAGGCCCTGGTGCAGCTGCGCTAATAGCCGTAACCGAAGAAATTGC TAAGAAGGGCAATGCCACAATTGTCTCGAAAGCATCCTATGAAGCGGGCACCACGCGCGTAGCCGACGCGATTGATACAT TCGTCAAGGCAAAGCCTCAGGCGATCATTCTGGTGTGCAGTGGTGCAGCTGGTGCGCGCTTTATTGAACGATACCGCGCG GACGGCGGCTCCGCACAAATTTTCATACATTCGGGCGCCGATATGGAGCGCGTGACGAAGCGGATTGCGGAAAACCGCCT GGCCTTCGTCTCGAGCGTTATGCAGGGAGTGGCCATTGCGCAGGTTGTGCCCAGTCCGTATCACTCTTCTAGGCTGGCGA AAGAGCTCAATGAGGCAGTGGCCAAAGACGGTAAGTTGGATGTACCGGTGAGCTACGTCATGATGGAAGGCTACATTGCG GCGAAGGTCATTATTGAAGCCGTGCGGCGCCAGGGGAAGCGACCGACCCGCGAAGGCATGGCCGCAGCGCTGGAGAGCAT CGATAGTCTCAACCTGGGCGGGTATGTAGTCGGCTTCAAGCCTGGCATGCGAAGTGGCTCGAAGTTCGTGGAACTTACGA TCATCAGCGATACCGGTAAGATTCGCCAATGA
Upstream 100 bases:
>100_bases ATCGCTGGAACCGCACGATTGAGCGTTGATTTTCTCTCCGGTTCTTTCCTTCTTCGAAGGGGCAGCTGGATCACATTTCC CACAATTTCCTATCACCTAG
Downstream 100 bases:
>100_bases ATGAGATTCTGGCAGCGCTTGCTGAAAGCCGCATTGTGGATTTCTTCGTCAAGCCTGGGCGCTGACCTGTAGCGATAAGC CAATTAGTGATGCTGCTCAC
Product: extracellular ligand-binding receptor
Products: NA
Alternate protein names: Abc-Type Branched-Chain Amino Acid Transport Systems; Serine/Threonine Protein Kinase; Branched-Chain Amino Acid ABC Transporter; Lipoprotein; Signal Peptide; ABC Branched-Chain Amino Acid Transporter
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MKHIFKLAMPAFLSCAAILATPSVQATQIVVGQVAPLSGPEASQGRAYAAGMQFLFNDINRAGGVNGHTFELVSKDDGGG PEDTVAITRQLLTENQPMVLAGYFGNRNISELVIAGFLEKEKLALVGYRAAEIGVEIPQLYNVRANFRTELSKITEHLAA IGVTRLGLLYEEGPGAAALIAVTEEIAKKGNATIVSKASYEAGTTRVADAIDTFVKAKPQAIILVCSGAAGARFIERYRA DGGSAQIFIHSGADMERVTKRIAENRLAFVSSVMQGVAIAQVVPSPYHSSRLAKELNEAVAKDGKLDVPVSYVMMEGYIA AKVIIEAVRRQGKRPTREGMAAALESIDSLNLGGYVVGFKPGMRSGSKFVELTIISDTGKIRQ
Sequences:
>Translated_383_residues MKHIFKLAMPAFLSCAAILATPSVQATQIVVGQVAPLSGPEASQGRAYAAGMQFLFNDINRAGGVNGHTFELVSKDDGGG PEDTVAITRQLLTENQPMVLAGYFGNRNISELVIAGFLEKEKLALVGYRAAEIGVEIPQLYNVRANFRTELSKITEHLAA IGVTRLGLLYEEGPGAAALIAVTEEIAKKGNATIVSKASYEAGTTRVADAIDTFVKAKPQAIILVCSGAAGARFIERYRA DGGSAQIFIHSGADMERVTKRIAENRLAFVSSVMQGVAIAQVVPSPYHSSRLAKELNEAVAKDGKLDVPVSYVMMEGYIA AKVIIEAVRRQGKRPTREGMAAALESIDSLNLGGYVVGFKPGMRSGSKFVELTIISDTGKIRQ >Mature_383_residues MKHIFKLAMPAFLSCAAILATPSVQATQIVVGQVAPLSGPEASQGRAYAAGMQFLFNDINRAGGVNGHTFELVSKDDGGG PEDTVAITRQLLTENQPMVLAGYFGNRNISELVIAGFLEKEKLALVGYRAAEIGVEIPQLYNVRANFRTELSKITEHLAA IGVTRLGLLYEEGPGAAALIAVTEEIAKKGNATIVSKASYEAGTTRVADAIDTFVKAKPQAIILVCSGAAGARFIERYRA DGGSAQIFIHSGADMERVTKRIAENRLAFVSSVMQGVAIAQVVPSPYHSSRLAKELNEAVAKDGKLDVPVSYVMMEGYIA AKVIIEAVRRQGKRPTREGMAAALESIDSLNLGGYVVGFKPGMRSGSKFVELTIISDTGKIRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40803; Mature: 40803
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHIFKLAMPAFLSCAAILATPSVQATQIVVGQVAPLSGPEASQGRAYAAGMQFLFNDIN CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH RAGGVNGHTFELVSKDDGGGPEDTVAITRQLLTENQPMVLAGYFGNRNISELVIAGFLEK HHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCC EKLALVGYRAAEIGVEIPQLYNVRANFRTELSKITEHLAAIGVTRLGLLYEEGPGAAALI CCEEEEEEEHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEH AVTEEIAKKGNATIVSKASYEAGTTRVADAIDTFVKAKPQAIILVCSGAAGARFIERYRA HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHC DGGSAQIFIHSGADMERVTKRIAENRLAFVSSVMQGVAIAQVVPSPYHSSRLAKELNEAV CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AKDGKLDVPVSYVMMEGYIAAKVIIEAVRRQGKRPTREGMAAALESIDSLNLGGYVVGFK HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEC PGMRSGSKFVELTIISDTGKIRQ CCCCCCCCEEEEEEEECCCCCCC >Mature Secondary Structure MKHIFKLAMPAFLSCAAILATPSVQATQIVVGQVAPLSGPEASQGRAYAAGMQFLFNDIN CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH RAGGVNGHTFELVSKDDGGGPEDTVAITRQLLTENQPMVLAGYFGNRNISELVIAGFLEK HHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCC EKLALVGYRAAEIGVEIPQLYNVRANFRTELSKITEHLAAIGVTRLGLLYEEGPGAAALI CCEEEEEEEHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEH AVTEEIAKKGNATIVSKASYEAGTTRVADAIDTFVKAKPQAIILVCSGAAGARFIERYRA HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHC DGGSAQIFIHSGADMERVTKRIAENRLAFVSSVMQGVAIAQVVPSPYHSSRLAKELNEAV CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AKDGKLDVPVSYVMMEGYIAAKVIIEAVRRQGKRPTREGMAAALESIDSLNLGGYVVGFK HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEC PGMRSGSKFVELTIISDTGKIRQ CCCCCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA