Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790242

Identifier: 91790242

GI number: 91790242

Start: 4654959

End: 4656110

Strand: Reverse

Name: 91790242

Synonym: Bpro_4409

Alternate gene names: NA

Gene position: 4656110-4654959 (Counterclockwise)

Preceding gene: 91790243

Following gene: 91790240

Centisome position: 89.54

GC content: 56.51

Gene sequence:

>1152_bases
ATGAAACACATCTTCAAGCTGGCAATGCCAGCTTTCTTAAGCTGCGCCGCGATTTTGGCTACTCCATCGGTGCAGGCCAC
GCAAATCGTTGTTGGGCAGGTAGCGCCGCTATCTGGGCCCGAGGCCAGCCAGGGGCGTGCGTACGCTGCCGGTATGCAGT
TCCTCTTTAACGACATCAATAGGGCCGGCGGCGTGAATGGGCATACCTTCGAGTTGGTGAGTAAGGATGACGGTGGCGGG
CCAGAGGATACGGTCGCTATCACCCGCCAATTGCTCACCGAGAATCAGCCGATGGTGTTGGCCGGCTATTTTGGCAACCG
CAACATCTCTGAACTTGTGATTGCGGGCTTTCTGGAAAAGGAAAAGCTCGCCTTGGTGGGCTACCGCGCTGCTGAAATCG
GCGTTGAGATCCCTCAGCTCTACAACGTAAGGGCAAATTTCCGTACTGAGCTTAGTAAGATCACCGAGCATCTGGCGGCA
ATAGGAGTGACGCGCCTGGGTCTCCTCTACGAGGAAGGCCCTGGTGCAGCTGCGCTAATAGCCGTAACCGAAGAAATTGC
TAAGAAGGGCAATGCCACAATTGTCTCGAAAGCATCCTATGAAGCGGGCACCACGCGCGTAGCCGACGCGATTGATACAT
TCGTCAAGGCAAAGCCTCAGGCGATCATTCTGGTGTGCAGTGGTGCAGCTGGTGCGCGCTTTATTGAACGATACCGCGCG
GACGGCGGCTCCGCACAAATTTTCATACATTCGGGCGCCGATATGGAGCGCGTGACGAAGCGGATTGCGGAAAACCGCCT
GGCCTTCGTCTCGAGCGTTATGCAGGGAGTGGCCATTGCGCAGGTTGTGCCCAGTCCGTATCACTCTTCTAGGCTGGCGA
AAGAGCTCAATGAGGCAGTGGCCAAAGACGGTAAGTTGGATGTACCGGTGAGCTACGTCATGATGGAAGGCTACATTGCG
GCGAAGGTCATTATTGAAGCCGTGCGGCGCCAGGGGAAGCGACCGACCCGCGAAGGCATGGCCGCAGCGCTGGAGAGCAT
CGATAGTCTCAACCTGGGCGGGTATGTAGTCGGCTTCAAGCCTGGCATGCGAAGTGGCTCGAAGTTCGTGGAACTTACGA
TCATCAGCGATACCGGTAAGATTCGCCAATGA

Upstream 100 bases:

>100_bases
ATCGCTGGAACCGCACGATTGAGCGTTGATTTTCTCTCCGGTTCTTTCCTTCTTCGAAGGGGCAGCTGGATCACATTTCC
CACAATTTCCTATCACCTAG

Downstream 100 bases:

>100_bases
ATGAGATTCTGGCAGCGCTTGCTGAAAGCCGCATTGTGGATTTCTTCGTCAAGCCTGGGCGCTGACCTGTAGCGATAAGC
CAATTAGTGATGCTGCTCAC

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: Abc-Type Branched-Chain Amino Acid Transport Systems; Serine/Threonine Protein Kinase; Branched-Chain Amino Acid ABC Transporter; Lipoprotein; Signal Peptide; ABC Branched-Chain Amino Acid Transporter

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MKHIFKLAMPAFLSCAAILATPSVQATQIVVGQVAPLSGPEASQGRAYAAGMQFLFNDINRAGGVNGHTFELVSKDDGGG
PEDTVAITRQLLTENQPMVLAGYFGNRNISELVIAGFLEKEKLALVGYRAAEIGVEIPQLYNVRANFRTELSKITEHLAA
IGVTRLGLLYEEGPGAAALIAVTEEIAKKGNATIVSKASYEAGTTRVADAIDTFVKAKPQAIILVCSGAAGARFIERYRA
DGGSAQIFIHSGADMERVTKRIAENRLAFVSSVMQGVAIAQVVPSPYHSSRLAKELNEAVAKDGKLDVPVSYVMMEGYIA
AKVIIEAVRRQGKRPTREGMAAALESIDSLNLGGYVVGFKPGMRSGSKFVELTIISDTGKIRQ

Sequences:

>Translated_383_residues
MKHIFKLAMPAFLSCAAILATPSVQATQIVVGQVAPLSGPEASQGRAYAAGMQFLFNDINRAGGVNGHTFELVSKDDGGG
PEDTVAITRQLLTENQPMVLAGYFGNRNISELVIAGFLEKEKLALVGYRAAEIGVEIPQLYNVRANFRTELSKITEHLAA
IGVTRLGLLYEEGPGAAALIAVTEEIAKKGNATIVSKASYEAGTTRVADAIDTFVKAKPQAIILVCSGAAGARFIERYRA
DGGSAQIFIHSGADMERVTKRIAENRLAFVSSVMQGVAIAQVVPSPYHSSRLAKELNEAVAKDGKLDVPVSYVMMEGYIA
AKVIIEAVRRQGKRPTREGMAAALESIDSLNLGGYVVGFKPGMRSGSKFVELTIISDTGKIRQ
>Mature_383_residues
MKHIFKLAMPAFLSCAAILATPSVQATQIVVGQVAPLSGPEASQGRAYAAGMQFLFNDINRAGGVNGHTFELVSKDDGGG
PEDTVAITRQLLTENQPMVLAGYFGNRNISELVIAGFLEKEKLALVGYRAAEIGVEIPQLYNVRANFRTELSKITEHLAA
IGVTRLGLLYEEGPGAAALIAVTEEIAKKGNATIVSKASYEAGTTRVADAIDTFVKAKPQAIILVCSGAAGARFIERYRA
DGGSAQIFIHSGADMERVTKRIAENRLAFVSSVMQGVAIAQVVPSPYHSSRLAKELNEAVAKDGKLDVPVSYVMMEGYIA
AKVIIEAVRRQGKRPTREGMAAALESIDSLNLGGYVVGFKPGMRSGSKFVELTIISDTGKIRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40803; Mature: 40803

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHIFKLAMPAFLSCAAILATPSVQATQIVVGQVAPLSGPEASQGRAYAAGMQFLFNDIN
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
RAGGVNGHTFELVSKDDGGGPEDTVAITRQLLTENQPMVLAGYFGNRNISELVIAGFLEK
HHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCC
EKLALVGYRAAEIGVEIPQLYNVRANFRTELSKITEHLAAIGVTRLGLLYEEGPGAAALI
CCEEEEEEEHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEH
AVTEEIAKKGNATIVSKASYEAGTTRVADAIDTFVKAKPQAIILVCSGAAGARFIERYRA
HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHC
DGGSAQIFIHSGADMERVTKRIAENRLAFVSSVMQGVAIAQVVPSPYHSSRLAKELNEAV
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
AKDGKLDVPVSYVMMEGYIAAKVIIEAVRRQGKRPTREGMAAALESIDSLNLGGYVVGFK
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEC
PGMRSGSKFVELTIISDTGKIRQ
CCCCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MKHIFKLAMPAFLSCAAILATPSVQATQIVVGQVAPLSGPEASQGRAYAAGMQFLFNDIN
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
RAGGVNGHTFELVSKDDGGGPEDTVAITRQLLTENQPMVLAGYFGNRNISELVIAGFLEK
HHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCC
EKLALVGYRAAEIGVEIPQLYNVRANFRTELSKITEHLAAIGVTRLGLLYEEGPGAAALI
CCEEEEEEEHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEH
AVTEEIAKKGNATIVSKASYEAGTTRVADAIDTFVKAKPQAIILVCSGAAGARFIERYRA
HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHC
DGGSAQIFIHSGADMERVTKRIAENRLAFVSSVMQGVAIAQVVPSPYHSSRLAKELNEAV
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
AKDGKLDVPVSYVMMEGYIAAKVIIEAVRRQGKRPTREGMAAALESIDSLNLGGYVVGFK
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEC
PGMRSGSKFVELTIISDTGKIRQ
CCCCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA