Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is gsiC [H]

Identifier: 91790228

GI number: 91790228

Start: 4638792

End: 4639781

Strand: Reverse

Name: gsiC [H]

Synonym: Bpro_4394

Alternate gene names: 91790228

Gene position: 4639781-4638792 (Counterclockwise)

Preceding gene: 91790230

Following gene: 91790227

Centisome position: 89.22

GC content: 60.51

Gene sequence:

>990_bases
GTGTCATCATTCGGTCACGGAATCGGGCCTGCATGGTGCAGATCCAGCCGCTGTAAATCCAGAGCCGCTGCTCTCCGAAA
ACACCTCATGCTCAATTATGTGATCAGACGCCTGTTGCTGTTCGTGCCCATGCTCGCCGGCATCTCACTGGCCGTCTTCC
TCGTCATGCATGCCATACCCGGTGACCTGGCGCGCATGGCCGCCGGCCCCGATGCAGCCGAGGCCGACATCGAGCAAATC
CGCCGCAACTATGGCCTGGACAAGCCGCTGCACCAGCAGTACTTCATCTACCTCCAGCGTGTGGTCTTGCAAGGCGATCT
CGGGGACTCCTTTCAGACCTATGCGCCGGTGACCGAAAGCATCGCACGCACGCTTCCAGCGACCCTTGAGCTGGCCACTG
CCGGGATGCTGCTGGCCGTAGTACTTGGTGTACCACTGGGCATCGCGGCTGCACTCAAGCCGCGCGGTCTGCTCGACAGC
GCTTTGACCGCACTTGCGGTGGTCGGCATCTCGATGCCGGGGTTCTTCCTGGGCCTTCTGCTGATGCTTGTCTTTGCATC
CACGCTGGGCTGGTTGCCTCCCACCGGCCGTGGTAGCTGGCAGCAACTGGTGATGCCAGCCATCACGCTTGGTTTACCGT
ATGTAGCTACTTTCTCTCGGTTGGCGCGCTCCAGCATGCTAGACGTGCTGGGGGAGGATTACATCCGCACCGCTTATGCC
AAGGGGGTGGCACGGCCACGCGTCGTGTTACGTCATGCCCTGTCCAATGCATCAATACCCCTGGTGACCTCGTTCGGCAT
GGACTTTGGCCGCCTGCTTGGGGGGGGCGGTCATCGTCGAGACTGTATTCGCCTGGCCTGGTATGGGTCGTTACATGATC
GACGCGATCATGGTCCGCGACATCTACGTCGTGCAGGGAACCATCCTGGTCTTCGCCGCACTCGTCGTTCTCATCAACCT
CATCGTCGACCTGGCATATGGATTCCTTGA

Upstream 100 bases:

>100_bases
AACGCGCCAATGCAGCGTTAGCCGCAGTTTATTAGCGCAGAGCATAACATTTGCTTATGTGCGTCCAACCCTATTTGGAG
TTGTGCCGTGAGGGGGCTGA

Downstream 100 bases:

>100_bases
CCCTCGCATCACCTACGCTTGAAGTGCAGCCCAACGTGCCTGTCACCACTGCTGCAACGACTCGGCGTCCGGCCGGCGGC
TTCCTGCGTTACCTGCTCAG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MSSFGHGIGPAWCRSSRCKSRAAALRKHLMLNYVIRRLLLFVPMLAGISLAVFLVMHAIPGDLARMAAGPDAAEADIEQI
RRNYGLDKPLHQQYFIYLQRVVLQGDLGDSFQTYAPVTESIARTLPATLELATAGMLLAVVLGVPLGIAAALKPRGLLDS
ALTALAVVGISMPGFFLGLLLMLVFASTLGWLPPTGRGSWQQLVMPAITLGLPYVATFSRLARSSMLDVLGEDYIRTAYA
KGVARPRVVLRHALSNASIPLVTSFGMDFGRLLGGGGHRRDCIRLAWYGSLHDRRDHGPRHLRRAGNHPGLRRTRRSHQP
HRRPGIWIP

Sequences:

>Translated_329_residues
MSSFGHGIGPAWCRSSRCKSRAAALRKHLMLNYVIRRLLLFVPMLAGISLAVFLVMHAIPGDLARMAAGPDAAEADIEQI
RRNYGLDKPLHQQYFIYLQRVVLQGDLGDSFQTYAPVTESIARTLPATLELATAGMLLAVVLGVPLGIAAALKPRGLLDS
ALTALAVVGISMPGFFLGLLLMLVFASTLGWLPPTGRGSWQQLVMPAITLGLPYVATFSRLARSSMLDVLGEDYIRTAYA
KGVARPRVVLRHALSNASIPLVTSFGMDFGRLLGGGGHRRDCIRLAWYGSLHDRRDHGPRHLRRAGNHPGLRRTRRSHQP
HRRPGIWIP
>Mature_328_residues
SSFGHGIGPAWCRSSRCKSRAAALRKHLMLNYVIRRLLLFVPMLAGISLAVFLVMHAIPGDLARMAAGPDAAEADIEQIR
RNYGLDKPLHQQYFIYLQRVVLQGDLGDSFQTYAPVTESIARTLPATLELATAGMLLAVVLGVPLGIAAALKPRGLLDSA
LTALAVVGISMPGFFLGLLLMLVFASTLGWLPPTGRGSWQQLVMPAITLGLPYVATFSRLARSSMLDVLGEDYIRTAYAK
GVARPRVVLRHALSNASIPLVTSFGMDFGRLLGGGGHRRDCIRLAWYGSLHDRRDHGPRHLRRAGNHPGLRRTRRSHQPH
RRPGIWIP

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=247, Percent_Identity=47.7732793522267, Blast_Score=215, Evalue=4e-57,
Organism=Escherichia coli, GI1789888, Length=250, Percent_Identity=40.4, Blast_Score=170, Evalue=9e-44,
Organism=Escherichia coli, GI1789965, Length=278, Percent_Identity=38.1294964028777, Blast_Score=170, Evalue=1e-43,
Organism=Escherichia coli, GI1787761, Length=269, Percent_Identity=38.6617100371747, Blast_Score=147, Evalue=7e-37,
Organism=Escherichia coli, GI1787497, Length=251, Percent_Identity=35.8565737051793, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1787550, Length=203, Percent_Identity=28.5714285714286, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1788504, Length=292, Percent_Identity=27.0547945205479, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36013; Mature: 35882

Theoretical pI: Translated: 11.62; Mature: 11.62

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFGHGIGPAWCRSSRCKSRAAALRKHLMLNYVIRRLLLFVPMLAGISLAVFLVMHAIP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GDLARMAAGPDAAEADIEQIRRNYGLDKPLHQQYFIYLQRVVLQGDLGDSFQTYAPVTES
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
IARTLPATLELATAGMLLAVVLGVPLGIAAALKPRGLLDSALTALAVVGISMPGFFLGLL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHH
LMLVFASTLGWLPPTGRGSWQQLVMPAITLGLPYVATFSRLARSSMLDVLGEDYIRTAYA
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGVARPRVVLRHALSNASIPLVTSFGMDFGRLLGGGGHRRDCIRLAWYGSLHDRRDHGPR
HHCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHCCCCCHHHHHHHHHHCCHHHHCCCCHH
HLRRAGNHPGLRRTRRSHQPHRRPGIWIP
HHHHCCCCCCHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SSFGHGIGPAWCRSSRCKSRAAALRKHLMLNYVIRRLLLFVPMLAGISLAVFLVMHAIP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC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HHHHCCCCCCHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA