| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is argH [H]
Identifier: 91790225
GI number: 91790225
Start: 4634664
End: 4636205
Strand: Reverse
Name: argH [H]
Synonym: Bpro_4391
Alternate gene names: 91790225
Gene position: 4636205-4634664 (Counterclockwise)
Preceding gene: 91790226
Following gene: 91790224
Centisome position: 89.15
GC content: 63.04
Gene sequence:
>1542_bases ATGCCAACTTTCAAAGTCCCGATGACATCCACTACCCTTCATGAAACTCTGCTGACCGAAGCCCGGTTGAGCGCTCCCCC GGCCGCACGGCTGGTCAAATACCACGACCTGCCAGGCCTGGAGCGCGAGAAGAAGCAGTTCCAGGAGTTTGTCGCAGTCG ACATGGCGCACACCACCATGCTGGTGGAGGAAGGCATCATCTCAACAGCAGCCGGCCGCGCCATCCTTCAGCAGCTGCTT GCGATCCGCCGCATGGAGCCGGCTGACTTTCCCACGGACGTTCGCAAGGGAAGTTTCCTGCTGCAGATCGAGTCCTACCT CTTTGCGGCAATCGGCGAGGACGTAGGCGGGCAGATGCACACAGGCCGTAGCCGTATCGACCAGGGCGCCACCGTCCGGC GGCTTTACAAGCGCAACCGCATGCTCGATGTGATGGACCAGCTCAACGGCCTGCAGGACGCCATCGCCCAGCAGGCGCGG CGCCATGCTCGCACCATCATGCCCGGTTACACCCACCTTCAACATGCGCAGCCCTGGGTCTTCGGCCATTACCTGCTGAG CTTCAGCTCGCGGCTGCACGACAGCTTCGAGCGGCTGGCCCAGGCGTATGGCCGCGTCAACCGCAACCCGCTGGGCGCGG TCGGCCTGGCTGGAACCTCCTGGCCACTGAACCGCATGCGCACCACCGCGCTGCTGGGTTTTGATGGGCTGGTGGAAAAC TCCAAGCTGGGACGCGAGGCCTACTACGCGGCCGAGGCCATCGGTGCTCTGGCCTTTGTCATGGCGGACCTCAACGACCT AGCGACCGATCTGCACCTTTGGTCCAGCACAGAGTTCGGCTTGGTCGAAAGCGACGACAGCTATTGCGGCACAAGCAGCA TCTTTCCTCAGAAGAAAAATCCGGCGGGCCTTGAAACCATTAAAAAGGCCGCCGGCTCGGCCGTAACCTGGCTGGCCACC GCGCTGGCCACCTTCCGTGCGGAGGGAACGGGTGACCAAGCCATGCGCGAACTGCCGCTGATCGATGAGGCACTCGCAAC CACTGAAGGCATGCTTGACCTCTTCACCGGGGTAATCGAGACGCTGATCGTGCATGACGACCGTATGGCCGAATCACTCA GCGGCAGCTGGTGTACGGCCAGTAACCTTGCCGATGTGATCGTACGCGAGCGCGGCCTTTCGTTTCGCCAAGTGCATCAC ATCGTGGCGCGTGTCGTGCGCAACTGCATTGCGCAAGGAACTGCACCGGCTGATTTGACAAGCGCACTGCTCGATGAGGC TGCGTTAGAAACCGCCGGCCTTGAGCTCAGGCTCGGCGATGAGGCCGTGCGCGATGCGCTTGATCCAAGGCGTTTTGTCG AAACCCGGGTCACCGACGGCAGCGTAGCGCCGCTGCAGGTCGCCCGTCTGCTGGCGCATGCGCAGAGCGAGCGTGTTGCC GACAAGCGCTGGGTGGAGGAGGCGCGCGCCCGCCTGGCACGGGCTCAGAGCGAACTGAACCAGGCCGTCGGCCGGCTTGT CGCTGCCGTGGAAACTGTATGA
Upstream 100 bases:
>100_bases TTCAACTCATCGGCCAACGCAAGGGCGTCAAGGGTCTGACCGTCTATAGCGACGAGATCGTCGAATTTAACAACGCAACC GTCACCCGCTAACCCACTTG
Downstream 100 bases:
>100_bases ACGCTGACCTCGTCGCCCGCGTACAGAACCTGAGCGTGGCCTTCTGCGGCGACGTCGGCGCCCCCATGGCGGTGCGCGAT GTCTCTTTCGAGGTGGCGCG
Product: argininosuccinate lyase
Products: NA
Alternate protein names: ASAL; Arginosuccinase [H]
Number of amino acids: Translated: 513; Mature: 512
Protein sequence:
>513_residues MPTFKVPMTSTTLHETLLTEARLSAPPAARLVKYHDLPGLEREKKQFQEFVAVDMAHTTMLVEEGIISTAAGRAILQQLL AIRRMEPADFPTDVRKGSFLLQIESYLFAAIGEDVGGQMHTGRSRIDQGATVRRLYKRNRMLDVMDQLNGLQDAIAQQAR RHARTIMPGYTHLQHAQPWVFGHYLLSFSSRLHDSFERLAQAYGRVNRNPLGAVGLAGTSWPLNRMRTTALLGFDGLVEN SKLGREAYYAAEAIGALAFVMADLNDLATDLHLWSSTEFGLVESDDSYCGTSSIFPQKKNPAGLETIKKAAGSAVTWLAT ALATFRAEGTGDQAMRELPLIDEALATTEGMLDLFTGVIETLIVHDDRMAESLSGSWCTASNLADVIVRERGLSFRQVHH IVARVVRNCIAQGTAPADLTSALLDEAALETAGLELRLGDEAVRDALDPRRFVETRVTDGSVAPLQVARLLAHAQSERVA DKRWVEEARARLARAQSELNQAVGRLVAAVETV
Sequences:
>Translated_513_residues MPTFKVPMTSTTLHETLLTEARLSAPPAARLVKYHDLPGLEREKKQFQEFVAVDMAHTTMLVEEGIISTAAGRAILQQLL AIRRMEPADFPTDVRKGSFLLQIESYLFAAIGEDVGGQMHTGRSRIDQGATVRRLYKRNRMLDVMDQLNGLQDAIAQQAR RHARTIMPGYTHLQHAQPWVFGHYLLSFSSRLHDSFERLAQAYGRVNRNPLGAVGLAGTSWPLNRMRTTALLGFDGLVEN SKLGREAYYAAEAIGALAFVMADLNDLATDLHLWSSTEFGLVESDDSYCGTSSIFPQKKNPAGLETIKKAAGSAVTWLAT ALATFRAEGTGDQAMRELPLIDEALATTEGMLDLFTGVIETLIVHDDRMAESLSGSWCTASNLADVIVRERGLSFRQVHH IVARVVRNCIAQGTAPADLTSALLDEAALETAGLELRLGDEAVRDALDPRRFVETRVTDGSVAPLQVARLLAHAQSERVA DKRWVEEARARLARAQSELNQAVGRLVAAVETV >Mature_512_residues PTFKVPMTSTTLHETLLTEARLSAPPAARLVKYHDLPGLEREKKQFQEFVAVDMAHTTMLVEEGIISTAAGRAILQQLLA IRRMEPADFPTDVRKGSFLLQIESYLFAAIGEDVGGQMHTGRSRIDQGATVRRLYKRNRMLDVMDQLNGLQDAIAQQARR HARTIMPGYTHLQHAQPWVFGHYLLSFSSRLHDSFERLAQAYGRVNRNPLGAVGLAGTSWPLNRMRTTALLGFDGLVENS KLGREAYYAAEAIGALAFVMADLNDLATDLHLWSSTEFGLVESDDSYCGTSSIFPQKKNPAGLETIKKAAGSAVTWLATA LATFRAEGTGDQAMRELPLIDEALATTEGMLDLFTGVIETLIVHDDRMAESLSGSWCTASNLADVIVRERGLSFRQVHHI VARVVRNCIAQGTAPADLTSALLDEAALETAGLELRLGDEAVRDALDPRRFVETRVTDGSVAPLQVARLLAHAQSERVAD KRWVEEARARLARAQSELNQAVGRLVAAVETV
Specific function: Arginine biosynthesis; eighth (last) step. [C]
COG id: COG0165
COG function: function code E; Argininosuccinate lyase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lyase 1 family. Argininosuccinate lyase subfamily [H]
Homologues:
Organism=Homo sapiens, GI31541964, Length=307, Percent_Identity=34.2019543973941, Blast_Score=145, Evalue=9e-35, Organism=Homo sapiens, GI68303542, Length=307, Percent_Identity=34.2019543973941, Blast_Score=145, Evalue=9e-35, Organism=Homo sapiens, GI68303547, Length=305, Percent_Identity=33.7704918032787, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI68303549, Length=307, Percent_Identity=32.2475570032573, Blast_Score=124, Evalue=2e-28, Organism=Escherichia coli, GI1790398, Length=378, Percent_Identity=32.5396825396825, Blast_Score=169, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6321806, Length=301, Percent_Identity=35.5481727574751, Blast_Score=171, Evalue=3e-43, Organism=Drosophila melanogaster, GI221473854, Length=377, Percent_Identity=30.5039787798408, Blast_Score=155, Evalue=4e-38, Organism=Drosophila melanogaster, GI78706858, Length=377, Percent_Identity=30.5039787798408, Blast_Score=155, Evalue=4e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009049 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR008948 - InterPro: IPR022761 [H]
Pfam domain/function: PF00206 Lyase_1 [H]
EC number: =4.3.2.1 [H]
Molecular weight: Translated: 56310; Mature: 56179
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTFKVPMTSTTLHETLLTEARLSAPPAARLVKYHDLPGLEREKKQFQEFVAVDMAHTTM CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LVEEGIISTAAGRAILQQLLAIRRMEPADFPTDVRKGSFLLQIESYLFAAIGEDVGGQMH HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCEEEHHHHHHHHHHHHHCCCCCC TGRSRIDQGATVRRLYKRNRMLDVMDQLNGLQDAIAQQARRHARTIMPGYTHLQHAQPWV CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHH FGHYLLSFSSRLHDSFERLAQAYGRVNRNPLGAVGLAGTSWPLNRMRTTALLGFDGLVEN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHCCHHHHCC SKLGREAYYAAEAIGALAFVMADLNDLATDLHLWSSTEFGLVESDDSYCGTSSIFPQKKN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCC PAGLETIKKAAGSAVTWLATALATFRAEGTGDQAMRELPLIDEALATTEGMLDLFTGVIE CCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH TLIVHDDRMAESLSGSWCTASNLADVIVRERGLSFRQVHHIVARVVRNCIAQGTAPADLT HHHHCCHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH SALLDEAALETAGLELRLGDEAVRDALDPRRFVETRVTDGSVAPLQVARLLAHAQSERVA HHHHHHHHHHHCCCEEEECHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH DKRWVEEARARLARAQSELNQAVGRLVAAVETV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PTFKVPMTSTTLHETLLTEARLSAPPAARLVKYHDLPGLEREKKQFQEFVAVDMAHTTM CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LVEEGIISTAAGRAILQQLLAIRRMEPADFPTDVRKGSFLLQIESYLFAAIGEDVGGQMH HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCEEEHHHHHHHHHHHHHCCCCCC TGRSRIDQGATVRRLYKRNRMLDVMDQLNGLQDAIAQQARRHARTIMPGYTHLQHAQPWV CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHH FGHYLLSFSSRLHDSFERLAQAYGRVNRNPLGAVGLAGTSWPLNRMRTTALLGFDGLVEN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHCCHHHHCC SKLGREAYYAAEAIGALAFVMADLNDLATDLHLWSSTEFGLVESDDSYCGTSSIFPQKKN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCC PAGLETIKKAAGSAVTWLATALATFRAEGTGDQAMRELPLIDEALATTEGMLDLFTGVIE CCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH TLIVHDDRMAESLSGSWCTASNLADVIVRERGLSFRQVHHIVARVVRNCIAQGTAPADLT HHHHCCHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH SALLDEAALETAGLELRLGDEAVRDALDPRRFVETRVTDGSVAPLQVARLLAHAQSERVA HHHHHHHHHHHCCCEEEECHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH DKRWVEEARARLARAQSELNQAVGRLVAAVETV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]