Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ooxA [H]

Identifier: 91790209

GI number: 91790209

Start: 4615994

End: 4617409

Strand: Reverse

Name: ooxA [H]

Synonym: Bpro_4374

Alternate gene names: 91790209

Gene position: 4617409-4615994 (Counterclockwise)

Preceding gene: 91790210

Following gene: 91790208

Centisome position: 88.79

GC content: 69.84

Gene sequence:

>1416_bases
ATGGCGTTTGAAACATCATCCCGGATGGCGCCCGGCCGGCCAGCTGACATGGTTGATATCGCCATCATCGGCGCTGGCCC
CGCCGGCATGGCCGCGGCCATCGCCGCGCGTAAACACGGCGCCAGTGTCATGCTGCTCGACGAACAGCCCGCCGCTGGCG
GCCAGATCTACCGCGGCATCACCGATGTGCCCGCCAGGCGCCTGGACATTCTCGGGCCTGATTACGCCGCCGGTGCGGCG
CTGGCCAGGGACTTCACCGCCAGCGGCGCCCGCCACATCACCGGCGCCGCCGTCTGGCAGGTCACGGCCGAACGCAAAGT
GCACTACCTGCAGGACGGCGGTGTGCGTTCCGTCCAGGCCGGTTGCGTGCTGCTGTGCACCGGCGCTATGGAGCGGCCCT
TTCCCATCCCGGGCTGGACTCTACCCGGCGTGCTGACGGCCGGTGCCGCGCAGATCCTGCTCAAGGGCTCGGGCATGGCG
CCCACGCAGCCTGTGGTACTGGCGGGCTGCGGCCCGCTGCTCTACCTGCTCGGCTGGCAATACGTCCGCGCCGGTGTGCC
GATCGCGGCCATCATCGACACCACCGACGGCGCCGACTACCGCCGCGCCATCCGCCATGCGGGCGGCGCGCTGGCCGGCT
GGCGCTACCTCAAGAAAGGCCTCTCGCTCATGGCCGCACTGAAGAAGTCCGGCGCGCCGTTCTACAGGGGCGCGACCGGG
CTGCACGTGCTGGGCAATGGCAAAGCCAGCGGCCTGGGTTTTGTCAGCGGCGGCACGCTGCGCAAGGTGGACAGCCCGCT
GGTGCTGCTGCACCAGGGCGTGGTGCCGAACACCCAGTTCTCCTGGTCGCTGCGCGCCCGGCACGCATGGGACGAGGCCC
AGCTCTGCTGGTCGCCCGTCACTGACGCCTGGGGCGAGCTCGATGTGCCCGGCATCTTCGTCGCGGGCGACAGCGGCGGC
ATCGGCGGCGCCCGCGTGGCCGCGCTGCAGGGCGAACTCGCCGGGCTGGCCGCCGCCGCACAAATCGGCAAGCTGGCCGT
CCACACACGGGATAGCCTGGCCGAGCCGCTGCGCGCCGAGATGCGTGAGCACCTGTTCATCCGGCCTTTCCTTGATGCAC
TGTACCGCCCGAAGAAGGCCAATCGCATTCCGGCCGACGGCACCATCGTCTGCCGTTGCGAAGAAGTCACCGCCGGCGAC
ATCCGCGGCTATGTCGAGATCGGTTGTACCGGCCCCAACCAGGCCAAGAGCTTCGGCCGCTGCGGCATGGGGCCGTGCCA
GGGTCGGCAGTGTGGCCTGACGGTGACCGAGGTGATCGCCGATGCGCGCGGCGTGTCGCCCGGCGAGACCGGCTACTTTC
GCATACGTCCGCCGATCAAGCCGATCACACTTGGAGAGCTTGCGCATGAGGCCTGA

Upstream 100 bases:

>100_bases
GAGGCCGGCATGGCCATCCGTACCCAGGACGGTATGCGCGACCTGCTTGCCGAAGCCAAAGACCCGGCCATGGCTCTCGC
CCAGGCGATGGAGGCACCCC

Downstream 100 bases:

>100_bases
TGGCACCGGGCTGCCGCTGGGCAGCGACGTCATCGTCATAGGTGGCGGTTTCCACGGCACCTCCAGCGCATTGCACCTTT
CGCGCCGCGGCGCGAAGGTC

Product: BFD-like protein

Products: NA

Alternate protein names: Octopine oxidase subunit A [H]

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MAFETSSRMAPGRPADMVDIAIIGAGPAGMAAAIAARKHGASVMLLDEQPAAGGQIYRGITDVPARRLDILGPDYAAGAA
LARDFTASGARHITGAAVWQVTAERKVHYLQDGGVRSVQAGCVLLCTGAMERPFPIPGWTLPGVLTAGAAQILLKGSGMA
PTQPVVLAGCGPLLYLLGWQYVRAGVPIAAIIDTTDGADYRRAIRHAGGALAGWRYLKKGLSLMAALKKSGAPFYRGATG
LHVLGNGKASGLGFVSGGTLRKVDSPLVLLHQGVVPNTQFSWSLRARHAWDEAQLCWSPVTDAWGELDVPGIFVAGDSGG
IGGARVAALQGELAGLAAAAQIGKLAVHTRDSLAEPLRAEMREHLFIRPFLDALYRPKKANRIPADGTIVCRCEEVTAGD
IRGYVEIGCTGPNQAKSFGRCGMGPCQGRQCGLTVTEVIADARGVSPGETGYFRIRPPIKPITLGELAHEA

Sequences:

>Translated_471_residues
MAFETSSRMAPGRPADMVDIAIIGAGPAGMAAAIAARKHGASVMLLDEQPAAGGQIYRGITDVPARRLDILGPDYAAGAA
LARDFTASGARHITGAAVWQVTAERKVHYLQDGGVRSVQAGCVLLCTGAMERPFPIPGWTLPGVLTAGAAQILLKGSGMA
PTQPVVLAGCGPLLYLLGWQYVRAGVPIAAIIDTTDGADYRRAIRHAGGALAGWRYLKKGLSLMAALKKSGAPFYRGATG
LHVLGNGKASGLGFVSGGTLRKVDSPLVLLHQGVVPNTQFSWSLRARHAWDEAQLCWSPVTDAWGELDVPGIFVAGDSGG
IGGARVAALQGELAGLAAAAQIGKLAVHTRDSLAEPLRAEMREHLFIRPFLDALYRPKKANRIPADGTIVCRCEEVTAGD
IRGYVEIGCTGPNQAKSFGRCGMGPCQGRQCGLTVTEVIADARGVSPGETGYFRIRPPIKPITLGELAHEA
>Mature_470_residues
AFETSSRMAPGRPADMVDIAIIGAGPAGMAAAIAARKHGASVMLLDEQPAAGGQIYRGITDVPARRLDILGPDYAAGAAL
ARDFTASGARHITGAAVWQVTAERKVHYLQDGGVRSVQAGCVLLCTGAMERPFPIPGWTLPGVLTAGAAQILLKGSGMAP
TQPVVLAGCGPLLYLLGWQYVRAGVPIAAIIDTTDGADYRRAIRHAGGALAGWRYLKKGLSLMAALKKSGAPFYRGATGL
HVLGNGKASGLGFVSGGTLRKVDSPLVLLHQGVVPNTQFSWSLRARHAWDEAQLCWSPVTDAWGELDVPGIFVAGDSGGI
GGARVAALQGELAGLAAAAQIGKLAVHTRDSLAEPLRAEMREHLFIRPFLDALYRPKKANRIPADGTIVCRCEEVTAGDI
RGYVEIGCTGPNQAKSFGRCGMGPCQGRQCGLTVTEVIADARGVSPGETGYFRIRPPIKPITLGELAHEA

Specific function: Oxidative cleavage of octopine into L-arginine and pyruvate [H]

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To T-protein and to dimethylglycine dehydrogenase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007419
- InterPro:   IPR013027
- InterPro:   IPR017224
- InterPro:   IPR000103 [H]

Pfam domain/function: PF04324 Fer2_BFD; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 49190; Mature: 49059

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFETSSRMAPGRPADMVDIAIIGAGPAGMAAAIAARKHGASVMLLDEQPAAGGQIYRGI
CCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHCCC
TDVPARRLDILGPDYAAGAALARDFTASGARHITGAAVWQVTAERKVHYLQDGGVRSVQA
HHCCCHHEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHCEEEECCCCCCEECC
GCVLLCTGAMERPFPIPGWTLPGVLTAGAAQILLKGSGMAPTQPVVLAGCGPLLYLLGWQ
CEEEEEECCCCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCEEEECCHHHHHHHHHH
YVRAGVPIAAIIDTTDGADYRRAIRHAGGALAGWRYLKKGLSLMAALKKSGAPFYRGATG
HHHCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
LHVLGNGKASGLGFVSGGTLRKVDSPLVLLHQGVVPNTQFSWSLRARHAWDEAQLCWSPV
EEEEECCCCCCEEEECCCCEEECCCCEEEEECCCCCCCCEEEEEEHHCCCCHHHHHHCCH
TDAWGELDVPGIFVAGDSGGIGGARVAALQGELAGLAAAAQIGKLAVHTRDSLAEPLRAE
HCCCCCCCCCEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHH
MREHLFIRPFLDALYRPKKANRIPADGTIVCRCEEVTAGDIRGYVEIGCTGPNQAKSFGR
HHHCEEHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCHHHHHHCC
CGMGPCQGRQCGLTVTEVIADARGVSPGETGYFRIRPPIKPITLGELAHEA
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHCC
>Mature Secondary Structure 
AFETSSRMAPGRPADMVDIAIIGAGPAGMAAAIAARKHGASVMLLDEQPAAGGQIYRGI
CCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHCCC
TDVPARRLDILGPDYAAGAALARDFTASGARHITGAAVWQVTAERKVHYLQDGGVRSVQA
HHCCCHHEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHCEEEECCCCCCEECC
GCVLLCTGAMERPFPIPGWTLPGVLTAGAAQILLKGSGMAPTQPVVLAGCGPLLYLLGWQ
CEEEEEECCCCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCEEEECCHHHHHHHHHH
YVRAGVPIAAIIDTTDGADYRRAIRHAGGALAGWRYLKKGLSLMAALKKSGAPFYRGATG
HHHCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
LHVLGNGKASGLGFVSGGTLRKVDSPLVLLHQGVVPNTQFSWSLRARHAWDEAQLCWSPV
EEEEECCCCCCEEEECCCCEEECCCCEEEEECCCCCCCCEEEEEEHHCCCCHHHHHHCCH
TDAWGELDVPGIFVAGDSGGIGGARVAALQGELAGLAAAAQIGKLAVHTRDSLAEPLRAE
HCCCCCCCCCEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHH
MREHLFIRPFLDALYRPKKANRIPADGTIVCRCEEVTAGDIRGYVEIGCTGPNQAKSFGR
HHHCEEHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCHHHHHHCC
CGMGPCQGRQCGLTVTEVIADARGVSPGETGYFRIRPPIKPITLGELAHEA
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA