| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ags [H]
Identifier: 91790197
GI number: 91790197
Start: 4602251
End: 4603456
Strand: Reverse
Name: ags [H]
Synonym: Bpro_4362
Alternate gene names: 91790197
Gene position: 4603456-4602251 (Counterclockwise)
Preceding gene: 91790198
Following gene: 91790196
Centisome position: 88.52
GC content: 61.61
Gene sequence:
>1206_bases ATGACTGAGAACCCAGTGACCTCCAGGCTCACTTTTCCCTCCGATGCGGATTACAGCGATCGCATCGAACGCGCCCAAAC TGCGATGAAGAAGCATGGCATCGATGTTCTCGCGTTAGCAGGTATCGACATGCATCGCTTCTTCACCGGCTTGCACGGCC TGCCGGTCAGTAGACCGATCTGGCTGGTCCTTCCGCAGGCCGGCAAAGCCGGCTTCGTCTCGCCCGGCAGCGAAGTCAAG GAAATACGGGCTCGATGCGGCACGCCGGTGGCTGCCAAATGGGTCGAATGGAAAGAGCCCGTGCCGGCCCCCATGACGCA TCAGGATGCCCTCGCCAAACATCTCGAAAAGATCGCTCCAGACGCCCGCATGATCGGCGTCGACTTCAATGGAACGAATG GCGGAAACATCGTGCTGGTCACTCAGGCACTTGGCGTCGAACGCGTCAAGGACGTCACGCCGATGATGCGCGAGTTGCTC GCCGTAAAGGATGCGGCGGCGATCGGCGTCATTCGGCTCAGTTGCGACGTCATTGCCCACCAGTTCAACGCCAGCTGTGC CAACATCGCGCCTGGCGTTCCCGAATGGGAAGTGTCGCTCGCTTCTTTTGTGGCCGGTACCAGGCGGGCTGCAGAACTAT GGAACGGAGACGAGGAGCAGTCACCATTGGCGCTGGGCCTGCATATGACGGGGAGCGGGCCTGAGCGCACGGCGCGCTGC CATGCCGCTGGCGCTGGCCGCAAAATGCGGAATGGCGAAATCGTGCAAATATGCCGTTGTAGCACGGGCTTCTTCGGGCA TTTGATCGGTTTCGACCGGCCGGTCCAGGTTGGTTCAAAAGAGCCGTCTCAAGAAATGAGCAGGGTCGTTGATTTCGCGC GTGAGGCGCAAGAGGCGGCGTTGGCGATGGTTCGCCCCGGAGTGACGGCTGGTGAAGTACATGCCGCCGCAATGGAAGTG ATCGAGCGCGGCGGTTGGGAGAACCCCGTCCTGCACCGCACCGGGCGTTCGATTGGTTACTCCGGTTGGGACGGGCACGA GCTCAAAGCCGATTCGCCGACCGTGCTTCAACCGGGCATGGTCTTCACCGTCGAGCCGGGAATCTATGTAGATGGCGTCG GCGGCGCGCGCTTTGGCGACACGGTCGTCGTGACCGAAACCGGATGCGAAGTGCTCACCCCGTTCGACCTCGGGAGGGAC CTCTGA
Upstream 100 bases:
>100_bases AATCGCTGTTTTCAAAAAAATCCATATTAGTTATTGACAATACAATCGATTGCATTTCTAATACAAACGATTGGATAGAT ACTTCACACAGAGAAAGCCC
Downstream 100 bases:
>100_bases TGAAAGACCAGTTGCTCCCTGCCGTTTCCTTTCAGGGCGTCACTCGGCGGTACGGACTCGTCAATGCGGTGAGCGACGTG AGCCTTGACGTCTCGCCGGG
Product: peptidase M24
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MTENPVTSRLTFPSDADYSDRIERAQTAMKKHGIDVLALAGIDMHRFFTGLHGLPVSRPIWLVLPQAGKAGFVSPGSEVK EIRARCGTPVAAKWVEWKEPVPAPMTHQDALAKHLEKIAPDARMIGVDFNGTNGGNIVLVTQALGVERVKDVTPMMRELL AVKDAAAIGVIRLSCDVIAHQFNASCANIAPGVPEWEVSLASFVAGTRRAAELWNGDEEQSPLALGLHMTGSGPERTARC HAAGAGRKMRNGEIVQICRCSTGFFGHLIGFDRPVQVGSKEPSQEMSRVVDFAREAQEAALAMVRPGVTAGEVHAAAMEV IERGGWENPVLHRTGRSIGYSGWDGHELKADSPTVLQPGMVFTVEPGIYVDGVGGARFGDTVVVTETGCEVLTPFDLGRD L
Sequences:
>Translated_401_residues MTENPVTSRLTFPSDADYSDRIERAQTAMKKHGIDVLALAGIDMHRFFTGLHGLPVSRPIWLVLPQAGKAGFVSPGSEVK EIRARCGTPVAAKWVEWKEPVPAPMTHQDALAKHLEKIAPDARMIGVDFNGTNGGNIVLVTQALGVERVKDVTPMMRELL AVKDAAAIGVIRLSCDVIAHQFNASCANIAPGVPEWEVSLASFVAGTRRAAELWNGDEEQSPLALGLHMTGSGPERTARC HAAGAGRKMRNGEIVQICRCSTGFFGHLIGFDRPVQVGSKEPSQEMSRVVDFAREAQEAALAMVRPGVTAGEVHAAAMEV IERGGWENPVLHRTGRSIGYSGWDGHELKADSPTVLQPGMVFTVEPGIYVDGVGGARFGDTVVVTETGCEVLTPFDLGRD L >Mature_400_residues TENPVTSRLTFPSDADYSDRIERAQTAMKKHGIDVLALAGIDMHRFFTGLHGLPVSRPIWLVLPQAGKAGFVSPGSEVKE IRARCGTPVAAKWVEWKEPVPAPMTHQDALAKHLEKIAPDARMIGVDFNGTNGGNIVLVTQALGVERVKDVTPMMRELLA VKDAAAIGVIRLSCDVIAHQFNASCANIAPGVPEWEVSLASFVAGTRRAAELWNGDEEQSPLALGLHMTGSGPERTARCH AAGAGRKMRNGEIVQICRCSTGFFGHLIGFDRPVQVGSKEPSQEMSRVVDFAREAQEAALAMVRPGVTAGEVHAAAMEVI ERGGWENPVLHRTGRSIGYSGWDGHELKADSPTVLQPGMVFTVEPGIYVDGVGGARFGDTVVVTETGCEVLTPFDLGRDL
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Escherichia coli, GI1788728, Length=115, Percent_Identity=40.8695652173913, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1789275, Length=271, Percent_Identity=25.4612546125461, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000587 - InterPro: IPR000994 [H]
Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]
EC number: 3.4.-.- [C]
Molecular weight: Translated: 43030; Mature: 42898
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENPVTSRLTFPSDADYSDRIERAQTAMKKHGIDVLALAGIDMHRFFTGLHGLPVSRPI CCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCCCE WLVLPQAGKAGFVSPGSEVKEIRARCGTPVAAKWVEWKEPVPAPMTHQDALAKHLEKIAP EEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC DARMIGVDFNGTNGGNIVLVTQALGVERVKDVTPMMRELLAVKDAAAIGVIRLSCDVIAH CCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHH QFNASCANIAPGVPEWEVSLASFVAGTRRAAELWNGDEEQSPLALGLHMTGSGPERTARC HHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHEE HAAGAGRKMRNGEIVQICRCSTGFFGHLIGFDRPVQVGSKEPSQEMSRVVDFAREAQEAA HHCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LAMVRPGVTAGEVHAAAMEVIERGGWENPVLHRTGRSIGYSGWDGHELKADSPTVLQPGM HHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEECCCE VFTVEPGIYVDGVGGARFGDTVVVTETGCEVLTPFDLGRDL EEEECCCEEEECCCCCCCCCEEEEEECCCCEECCHHCCCCC >Mature Secondary Structure TENPVTSRLTFPSDADYSDRIERAQTAMKKHGIDVLALAGIDMHRFFTGLHGLPVSRPI CCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCCCE WLVLPQAGKAGFVSPGSEVKEIRARCGTPVAAKWVEWKEPVPAPMTHQDALAKHLEKIAP EEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC DARMIGVDFNGTNGGNIVLVTQALGVERVKDVTPMMRELLAVKDAAAIGVIRLSCDVIAH CCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHH QFNASCANIAPGVPEWEVSLASFVAGTRRAAELWNGDEEQSPLALGLHMTGSGPERTARC HHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHEE HAAGAGRKMRNGEIVQICRCSTGFFGHLIGFDRPVQVGSKEPSQEMSRVVDFAREAQEAA HHCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LAMVRPGVTAGEVHAAAMEVIERGGWENPVLHRTGRSIGYSGWDGHELKADSPTVLQPGM HHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEECCCE VFTVEPGIYVDGVGGARFGDTVVVTETGCEVLTPFDLGRDL EEEECCCEEEECCCCCCCCCEEEEEECCCCEECCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1852015 [H]