Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ags [H]

Identifier: 91790197

GI number: 91790197

Start: 4602251

End: 4603456

Strand: Reverse

Name: ags [H]

Synonym: Bpro_4362

Alternate gene names: 91790197

Gene position: 4603456-4602251 (Counterclockwise)

Preceding gene: 91790198

Following gene: 91790196

Centisome position: 88.52

GC content: 61.61

Gene sequence:

>1206_bases
ATGACTGAGAACCCAGTGACCTCCAGGCTCACTTTTCCCTCCGATGCGGATTACAGCGATCGCATCGAACGCGCCCAAAC
TGCGATGAAGAAGCATGGCATCGATGTTCTCGCGTTAGCAGGTATCGACATGCATCGCTTCTTCACCGGCTTGCACGGCC
TGCCGGTCAGTAGACCGATCTGGCTGGTCCTTCCGCAGGCCGGCAAAGCCGGCTTCGTCTCGCCCGGCAGCGAAGTCAAG
GAAATACGGGCTCGATGCGGCACGCCGGTGGCTGCCAAATGGGTCGAATGGAAAGAGCCCGTGCCGGCCCCCATGACGCA
TCAGGATGCCCTCGCCAAACATCTCGAAAAGATCGCTCCAGACGCCCGCATGATCGGCGTCGACTTCAATGGAACGAATG
GCGGAAACATCGTGCTGGTCACTCAGGCACTTGGCGTCGAACGCGTCAAGGACGTCACGCCGATGATGCGCGAGTTGCTC
GCCGTAAAGGATGCGGCGGCGATCGGCGTCATTCGGCTCAGTTGCGACGTCATTGCCCACCAGTTCAACGCCAGCTGTGC
CAACATCGCGCCTGGCGTTCCCGAATGGGAAGTGTCGCTCGCTTCTTTTGTGGCCGGTACCAGGCGGGCTGCAGAACTAT
GGAACGGAGACGAGGAGCAGTCACCATTGGCGCTGGGCCTGCATATGACGGGGAGCGGGCCTGAGCGCACGGCGCGCTGC
CATGCCGCTGGCGCTGGCCGCAAAATGCGGAATGGCGAAATCGTGCAAATATGCCGTTGTAGCACGGGCTTCTTCGGGCA
TTTGATCGGTTTCGACCGGCCGGTCCAGGTTGGTTCAAAAGAGCCGTCTCAAGAAATGAGCAGGGTCGTTGATTTCGCGC
GTGAGGCGCAAGAGGCGGCGTTGGCGATGGTTCGCCCCGGAGTGACGGCTGGTGAAGTACATGCCGCCGCAATGGAAGTG
ATCGAGCGCGGCGGTTGGGAGAACCCCGTCCTGCACCGCACCGGGCGTTCGATTGGTTACTCCGGTTGGGACGGGCACGA
GCTCAAAGCCGATTCGCCGACCGTGCTTCAACCGGGCATGGTCTTCACCGTCGAGCCGGGAATCTATGTAGATGGCGTCG
GCGGCGCGCGCTTTGGCGACACGGTCGTCGTGACCGAAACCGGATGCGAAGTGCTCACCCCGTTCGACCTCGGGAGGGAC
CTCTGA

Upstream 100 bases:

>100_bases
AATCGCTGTTTTCAAAAAAATCCATATTAGTTATTGACAATACAATCGATTGCATTTCTAATACAAACGATTGGATAGAT
ACTTCACACAGAGAAAGCCC

Downstream 100 bases:

>100_bases
TGAAAGACCAGTTGCTCCCTGCCGTTTCCTTTCAGGGCGTCACTCGGCGGTACGGACTCGTCAATGCGGTGAGCGACGTG
AGCCTTGACGTCTCGCCGGG

Product: peptidase M24

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MTENPVTSRLTFPSDADYSDRIERAQTAMKKHGIDVLALAGIDMHRFFTGLHGLPVSRPIWLVLPQAGKAGFVSPGSEVK
EIRARCGTPVAAKWVEWKEPVPAPMTHQDALAKHLEKIAPDARMIGVDFNGTNGGNIVLVTQALGVERVKDVTPMMRELL
AVKDAAAIGVIRLSCDVIAHQFNASCANIAPGVPEWEVSLASFVAGTRRAAELWNGDEEQSPLALGLHMTGSGPERTARC
HAAGAGRKMRNGEIVQICRCSTGFFGHLIGFDRPVQVGSKEPSQEMSRVVDFAREAQEAALAMVRPGVTAGEVHAAAMEV
IERGGWENPVLHRTGRSIGYSGWDGHELKADSPTVLQPGMVFTVEPGIYVDGVGGARFGDTVVVTETGCEVLTPFDLGRD
L

Sequences:

>Translated_401_residues
MTENPVTSRLTFPSDADYSDRIERAQTAMKKHGIDVLALAGIDMHRFFTGLHGLPVSRPIWLVLPQAGKAGFVSPGSEVK
EIRARCGTPVAAKWVEWKEPVPAPMTHQDALAKHLEKIAPDARMIGVDFNGTNGGNIVLVTQALGVERVKDVTPMMRELL
AVKDAAAIGVIRLSCDVIAHQFNASCANIAPGVPEWEVSLASFVAGTRRAAELWNGDEEQSPLALGLHMTGSGPERTARC
HAAGAGRKMRNGEIVQICRCSTGFFGHLIGFDRPVQVGSKEPSQEMSRVVDFAREAQEAALAMVRPGVTAGEVHAAAMEV
IERGGWENPVLHRTGRSIGYSGWDGHELKADSPTVLQPGMVFTVEPGIYVDGVGGARFGDTVVVTETGCEVLTPFDLGRD
L
>Mature_400_residues
TENPVTSRLTFPSDADYSDRIERAQTAMKKHGIDVLALAGIDMHRFFTGLHGLPVSRPIWLVLPQAGKAGFVSPGSEVKE
IRARCGTPVAAKWVEWKEPVPAPMTHQDALAKHLEKIAPDARMIGVDFNGTNGGNIVLVTQALGVERVKDVTPMMRELLA
VKDAAAIGVIRLSCDVIAHQFNASCANIAPGVPEWEVSLASFVAGTRRAAELWNGDEEQSPLALGLHMTGSGPERTARCH
AAGAGRKMRNGEIVQICRCSTGFFGHLIGFDRPVQVGSKEPSQEMSRVVDFAREAQEAALAMVRPGVTAGEVHAAAMEVI
ERGGWENPVLHRTGRSIGYSGWDGHELKADSPTVLQPGMVFTVEPGIYVDGVGGARFGDTVVVTETGCEVLTPFDLGRDL

Specific function: Unknown

COG id: COG0006

COG function: function code E; Xaa-Pro aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M24B family [H]

Homologues:

Organism=Escherichia coli, GI1788728, Length=115, Percent_Identity=40.8695652173913, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1789275, Length=271, Percent_Identity=25.4612546125461, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000587
- InterPro:   IPR000994 [H]

Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 43030; Mature: 42898

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTENPVTSRLTFPSDADYSDRIERAQTAMKKHGIDVLALAGIDMHRFFTGLHGLPVSRPI
CCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCCCE
WLVLPQAGKAGFVSPGSEVKEIRARCGTPVAAKWVEWKEPVPAPMTHQDALAKHLEKIAP
EEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC
DARMIGVDFNGTNGGNIVLVTQALGVERVKDVTPMMRELLAVKDAAAIGVIRLSCDVIAH
CCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHH
QFNASCANIAPGVPEWEVSLASFVAGTRRAAELWNGDEEQSPLALGLHMTGSGPERTARC
HHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHEE
HAAGAGRKMRNGEIVQICRCSTGFFGHLIGFDRPVQVGSKEPSQEMSRVVDFAREAQEAA
HHCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LAMVRPGVTAGEVHAAAMEVIERGGWENPVLHRTGRSIGYSGWDGHELKADSPTVLQPGM
HHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEECCCE
VFTVEPGIYVDGVGGARFGDTVVVTETGCEVLTPFDLGRDL
EEEECCCEEEECCCCCCCCCEEEEEECCCCEECCHHCCCCC
>Mature Secondary Structure 
TENPVTSRLTFPSDADYSDRIERAQTAMKKHGIDVLALAGIDMHRFFTGLHGLPVSRPI
CCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCCCE
WLVLPQAGKAGFVSPGSEVKEIRARCGTPVAAKWVEWKEPVPAPMTHQDALAKHLEKIAP
EEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC
DARMIGVDFNGTNGGNIVLVTQALGVERVKDVTPMMRELLAVKDAAAIGVIRLSCDVIAH
CCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHH
QFNASCANIAPGVPEWEVSLASFVAGTRRAAELWNGDEEQSPLALGLHMTGSGPERTARC
HHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHEE
HAAGAGRKMRNGEIVQICRCSTGFFGHLIGFDRPVQVGSKEPSQEMSRVVDFAREAQEAA
HHCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LAMVRPGVTAGEVHAAAMEVIERGGWENPVLHRTGRSIGYSGWDGHELKADSPTVLQPGM
HHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEECCCE
VFTVEPGIYVDGVGGARFGDTVVVTETGCEVLTPFDLGRDL
EEEECCCEEEECCCCCCCCCEEEEEECCCCEECCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1852015 [H]