Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790195

Identifier: 91790195

GI number: 91790195

Start: 4600085

End: 4601134

Strand: Reverse

Name: 91790195

Synonym: Bpro_4360

Alternate gene names: NA

Gene position: 4601134-4600085 (Counterclockwise)

Preceding gene: 91790196

Following gene: 91790194

Centisome position: 88.48

GC content: 58.38

Gene sequence:

>1050_bases
ATGAAGCAAGCAAAACTGTATTTGAGAATTTCAGCCGGCTTACTCGCTGCGGCCAGCGCAGTCTTCTTCCACCAGGCGGC
ACCGGCGGCCGGTCCCGCCCAGGTCGTGGTCGCCTCTTACGGAGGCTCCTTCCAAGACGCCCAGACAAAGGCTTTTTTCG
ATCCATACGCCAGAGCAACGGGTGCCAAAGTCATCGGCACGACCGGTACTGGGCATGCCAAGATCAAAGCCATGGTCACG
AGCGGCAACGTCACTTGGGACGTGGTCTCGGCCGACGCCGCGGCCTTTGAGAACGAGGTGAAGGATGATCTTCTTCAGCC
GCTCGATTATTCGGTGATCAAGGCCGATGGCATCCCGGCCAGCTTCCGCACAAAATACGGCATCGGCTACATGAAGTTCG
CACAGAATCTGGCGTGGAACAAAGAAAAGTTTCCGCATGGACTTACCCCGGCACAGTTCTTCGACCCAACGGTGAAAGCG
CGTCGCGTGATGTTGGCGGTGCCGTACTACAACCTCGAATTCGCGCTGCTGGCTGACGGTGTGAAGCCGGCCGAACTTTA
TCCGCTGGACGTGGCCCGCGCCCTCAGAGTTATCGACCGGGTCAAGCACCAGATTGTCGGCTTCAAGTCGCCCTCGGATG
TCCAAGCGCTCATCCAGCAGGGCGAGGTCGACGTCGCCTTTGCCCCGGGCGGTCGCGTCCAAAATGCCATAAAGGCCGGT
GCCAACTGGGCTTATGGGTGGAGCTCAGCGATCACGGTGGTCGAATATTGGGCGGTGGTCAAGGGTGCTCCGAATGCAGC
AGAGGCGATGAAATTCATCAATTTCGCCGTTCAGCCAAAGCCGCAGGCGGAACTTCCTCGCCATATCTTTTATGGCCCGA
CCAATGTCGACGCGCTGAAGCTTATTGACGGTGCAGCGCTCTCAGCCGTCGCCAAGGATCTGCCGGGCAATCCGGCTAAC
GAGAAGTTCGGCGCAATTCTTAACTCGAAATGGTGGAACGAGAACCTCGAGTCTGTGACGGCCCGCTGGAACACGTACGT
CTTGCGCTAA

Upstream 100 bases:

>100_bases
CCCGGCGAACCCGTCGTCGCGCGATGGGCGCCGACATTCGTTGCCGCTCTTCCGGCTGAAAAATCTTCCTGAAACAGAGT
CTTTTTAAAGGAGTGCAACC

Downstream 100 bases:

>100_bases
CAGCGCGTAAATAGGAGAACGCGAAGATGACACGCAGCAGTAGGTTCGTAAATTGGGTTGTAAATTGGGCGCGGTTCTTA
CTGCTGACTCCAATAGCCAT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MKQAKLYLRISAGLLAAASAVFFHQAAPAAGPAQVVVASYGGSFQDAQTKAFFDPYARATGAKVIGTTGTGHAKIKAMVT
SGNVTWDVVSADAAAFENEVKDDLLQPLDYSVIKADGIPASFRTKYGIGYMKFAQNLAWNKEKFPHGLTPAQFFDPTVKA
RRVMLAVPYYNLEFALLADGVKPAELYPLDVARALRVIDRVKHQIVGFKSPSDVQALIQQGEVDVAFAPGGRVQNAIKAG
ANWAYGWSSAITVVEYWAVVKGAPNAAEAMKFINFAVQPKPQAELPRHIFYGPTNVDALKLIDGAALSAVAKDLPGNPAN
EKFGAILNSKWWNENLESVTARWNTYVLR

Sequences:

>Translated_349_residues
MKQAKLYLRISAGLLAAASAVFFHQAAPAAGPAQVVVASYGGSFQDAQTKAFFDPYARATGAKVIGTTGTGHAKIKAMVT
SGNVTWDVVSADAAAFENEVKDDLLQPLDYSVIKADGIPASFRTKYGIGYMKFAQNLAWNKEKFPHGLTPAQFFDPTVKA
RRVMLAVPYYNLEFALLADGVKPAELYPLDVARALRVIDRVKHQIVGFKSPSDVQALIQQGEVDVAFAPGGRVQNAIKAG
ANWAYGWSSAITVVEYWAVVKGAPNAAEAMKFINFAVQPKPQAELPRHIFYGPTNVDALKLIDGAALSAVAKDLPGNPAN
EKFGAILNSKWWNENLESVTARWNTYVLR
>Mature_349_residues
MKQAKLYLRISAGLLAAASAVFFHQAAPAAGPAQVVVASYGGSFQDAQTKAFFDPYARATGAKVIGTTGTGHAKIKAMVT
SGNVTWDVVSADAAAFENEVKDDLLQPLDYSVIKADGIPASFRTKYGIGYMKFAQNLAWNKEKFPHGLTPAQFFDPTVKA
RRVMLAVPYYNLEFALLADGVKPAELYPLDVARALRVIDRVKHQIVGFKSPSDVQALIQQGEVDVAFAPGGRVQNAIKAG
ANWAYGWSSAITVVEYWAVVKGAPNAAEAMKFINFAVQPKPQAELPRHIFYGPTNVDALKLIDGAALSAVAKDLPGNPAN
EKFGAILNSKWWNENLESVTARWNTYVLR

Specific function: Unknown

COG id: COG0687

COG function: function code E; Spermidine/putrescine-binding periplasmic protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37735; Mature: 37735

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQAKLYLRISAGLLAAASAVFFHQAAPAAGPAQVVVASYGGSFQDAQTKAFFDPYARAT
CCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHCHHHHHC
GAKVIGTTGTGHAKIKAMVTSGNVTWDVVSADAAAFENEVKDDLLQPLDYSVIKADGIPA
CCEEEECCCCCCEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCCCC
SFRTKYGIGYMKFAQNLAWNKEKFPHGLTPAQFFDPTVKARRVMLAVPYYNLEFALLADG
CHHHHCCCHHHHHHHHHCCCHHCCCCCCCCHHHCCCCHHHCEEEEEECCCCEEEEEEECC
VKPAELYPLDVARALRVIDRVKHQIVGFKSPSDVQALIQQGEVDVAFAPGGRVQNAIKAG
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHCC
ANWAYGWSSAITVVEYWAVVKGAPNAAEAMKFINFAVQPKPQAELPRHIFYGPTNVDALK
CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHCCCCEEEECCCCCCHHH
LIDGAALSAVAKDLPGNPANEKFGAILNSKWWNENLESVTARWNTYVLR
HHCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHEEEEEC
>Mature Secondary Structure
MKQAKLYLRISAGLLAAASAVFFHQAAPAAGPAQVVVASYGGSFQDAQTKAFFDPYARAT
CCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHCHHHHHC
GAKVIGTTGTGHAKIKAMVTSGNVTWDVVSADAAAFENEVKDDLLQPLDYSVIKADGIPA
CCEEEECCCCCCEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCCCC
SFRTKYGIGYMKFAQNLAWNKEKFPHGLTPAQFFDPTVKARRVMLAVPYYNLEFALLADG
CHHHHCCCHHHHHHHHHCCCHHCCCCCCCCHHHCCCCHHHCEEEEEECCCCEEEEEEECC
VKPAELYPLDVARALRVIDRVKHQIVGFKSPSDVQALIQQGEVDVAFAPGGRVQNAIKAG
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHCC
ANWAYGWSSAITVVEYWAVVKGAPNAAEAMKFINFAVQPKPQAELPRHIFYGPTNVDALK
CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHCCCCEEEECCCCCCHHH
LIDGAALSAVAKDLPGNPANEKFGAILNSKWWNENLESVTARWNTYVLR
HHCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA