Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790189

Identifier: 91790189

GI number: 91790189

Start: 4592642

End: 4593721

Strand: Reverse

Name: 91790189

Synonym: Bpro_4354

Alternate gene names: NA

Gene position: 4593721-4592642 (Counterclockwise)

Preceding gene: 91790190

Following gene: 91790188

Centisome position: 88.34

GC content: 53.15

Gene sequence:

>1080_bases
ATGAAACGTAGAGATCTTATAAAAGCAGCCAGCTTTGCTGCAGTGGGCTCATTTGGAGTGACCCGCGCTTTTTCATTCGA
AGGTCCCGAACTCTACCCGGGTGAAAAAGTCTTGTACGAAGCTGCGGAAAAAGAAGGCTTGGTCGTCTCTTTTGACACGG
GGCCGGAATGGGCAAATTGGAAATCACTGTTCCGCGAGTTCAAGAAGCGCTATCCAGAAGTCGAACTCACCTATAACGAC
CTGGGCTCTGCTGCAACTGTCGTTGCCCTGGAGAAGACGCGCCGCCGGCCTCAGGCAGACACTGCCTACTATTTTGCCGC
TTCAGCCGTTGATGCAGTGAAGAAGGATGTCGTCGCACCATTTCAGCCGATTAACTTTGAGAAGCTTCCGGCTGTGTTTC
GAGAAGCGAGCGGCAAGTGGTTCACGATCCACACGTTAAATATTGCCTTCCTGGTGAATAAAAAACTCGTCAAAAACTCC
CCTACCAGCTGGGCCGACCTGCTTAAACCGGAGTTTAAGAACTCAGTTGTTTACCTTGATCCCCGGACAACAGGCGTGGG
CCAAGTGATGGTGTTTGCCGCTGCATACGCGACTGGAGGATCGGTGGATAACGTGAAGCCGGGGATTGATTATCTCGGGC
AACTCCATGCGCTAGGTAATGTGCAGCGCGTCGAGGGAACCACCCCTTATGCGAAGTTCCTCAAAGGTGAAATACCTGTG
TGGATCAGCTATGAAAACGATGGCCTCAAAGCGAAACACGTGGATGGTATGGGCGATGCCCTAGAAGTCATCATTCCCAA
GGAGGCGAGCGTTGCCGCGCCTTACGCCATTAGTCTTGTCAAGAACGCCCCAAATCCGAACAGCGGCAAGCTCTGGCTGA
ATTTCATCATGAGCGAAGTGGGGCAAGGACTCTTCGCTCAAGGATTCGTTCGTCCTTCGGTCCCAGGTGTGCGGCTAAGC
GCGGACATTCAAGCAAAAATGCCGGCTGCACCGCAGCTGCGCCCGCTTGATGTTGTAAAGGCGTCCGAGCGCAAGGCGGA
GATTGACCGCCTTTGGGCACAAGCTGTTCTTACCAAGTAA

Upstream 100 bases:

>100_bases
GGTCGAGTCGCGCCATTTGGCTGCCGCGTCGATTGCCATTTCACCGAAGCATATTCGCTTGCTTGATACCTAGTCGCTTT
TCCACCAACAGGAGATATTC

Downstream 100 bases:

>100_bases
TAACCCTTAAGCGGTTTGACTATGAAGCGATATGGCGCTTGGCCCGCATGGCTGTTCATGCTGGCCTTCTTTTTCCTACC
CTTGGCAGCACTGGTGCCAG

Product: putative ABC transport system, substrate-binding exported protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MKRRDLIKAASFAAVGSFGVTRAFSFEGPELYPGEKVLYEAAEKEGLVVSFDTGPEWANWKSLFREFKKRYPEVELTYND
LGSAATVVALEKTRRRPQADTAYYFAASAVDAVKKDVVAPFQPINFEKLPAVFREASGKWFTIHTLNIAFLVNKKLVKNS
PTSWADLLKPEFKNSVVYLDPRTTGVGQVMVFAAAYATGGSVDNVKPGIDYLGQLHALGNVQRVEGTTPYAKFLKGEIPV
WISYENDGLKAKHVDGMGDALEVIIPKEASVAAPYAISLVKNAPNPNSGKLWLNFIMSEVGQGLFAQGFVRPSVPGVRLS
ADIQAKMPAAPQLRPLDVVKASERKAEIDRLWAQAVLTK

Sequences:

>Translated_359_residues
MKRRDLIKAASFAAVGSFGVTRAFSFEGPELYPGEKVLYEAAEKEGLVVSFDTGPEWANWKSLFREFKKRYPEVELTYND
LGSAATVVALEKTRRRPQADTAYYFAASAVDAVKKDVVAPFQPINFEKLPAVFREASGKWFTIHTLNIAFLVNKKLVKNS
PTSWADLLKPEFKNSVVYLDPRTTGVGQVMVFAAAYATGGSVDNVKPGIDYLGQLHALGNVQRVEGTTPYAKFLKGEIPV
WISYENDGLKAKHVDGMGDALEVIIPKEASVAAPYAISLVKNAPNPNSGKLWLNFIMSEVGQGLFAQGFVRPSVPGVRLS
ADIQAKMPAAPQLRPLDVVKASERKAEIDRLWAQAVLTK
>Mature_359_residues
MKRRDLIKAASFAAVGSFGVTRAFSFEGPELYPGEKVLYEAAEKEGLVVSFDTGPEWANWKSLFREFKKRYPEVELTYND
LGSAATVVALEKTRRRPQADTAYYFAASAVDAVKKDVVAPFQPINFEKLPAVFREASGKWFTIHTLNIAFLVNKKLVKNS
PTSWADLLKPEFKNSVVYLDPRTTGVGQVMVFAAAYATGGSVDNVKPGIDYLGQLHALGNVQRVEGTTPYAKFLKGEIPV
WISYENDGLKAKHVDGMGDALEVIIPKEASVAAPYAISLVKNAPNPNSGKLWLNFIMSEVGQGLFAQGFVRPSVPGVRLS
ADIQAKMPAAPQLRPLDVVKASERKAEIDRLWAQAVLTK

Specific function: Unknown

COG id: COG1840

COG function: function code P; ABC-type Fe3+ transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 39401; Mature: 39401

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRDLIKAASFAAVGSFGVTRAFSFEGPELYPGEKVLYEAAEKEGLVVSFDTGPEWANW
CCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCH
KSLFREFKKRYPEVELTYNDLGSAATVVALEKTRRRPQADTAYYFAASAVDAVKKDVVAP
HHHHHHHHHHCCEEEEECCCCCCHHEEEEEHHHCCCCCCCHHEEHHHHHHHHHHHHHCCC
FQPINFEKLPAVFREASGKWFTIHTLNIAFLVNKKLVKNSPTSWADLLKPEFKNSVVYLD
CCCCCHHHHHHHHHHCCCCEEEEEEEEEEEEECHHHHCCCCCCHHHHHCHHHCCCEEEEC
PRTTGVGQVMVFAAAYATGGSVDNVKPGIDYLGQLHALGNVQRVEGTTPYAKFLKGEIPV
CCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHCCCCCE
WISYENDGLKAKHVDGMGDALEVIIPKEASVAAPYAISLVKNAPNPNSGKLWLNFIMSEV
EEEECCCCCEEEECCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH
GQGLFAQGFVRPSVPGVRLSADIQAKMPAAPQLRPLDVVKASERKAEIDRLWAQAVLTK
CCCHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRRDLIKAASFAAVGSFGVTRAFSFEGPELYPGEKVLYEAAEKEGLVVSFDTGPEWANW
CCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCH
KSLFREFKKRYPEVELTYNDLGSAATVVALEKTRRRPQADTAYYFAASAVDAVKKDVVAP
HHHHHHHHHHCCEEEEECCCCCCHHEEEEEHHHCCCCCCCHHEEHHHHHHHHHHHHHCCC
FQPINFEKLPAVFREASGKWFTIHTLNIAFLVNKKLVKNSPTSWADLLKPEFKNSVVYLD
CCCCCHHHHHHHHHHCCCCEEEEEEEEEEEEECHHHHCCCCCCHHHHHCHHHCCCEEEEC
PRTTGVGQVMVFAAAYATGGSVDNVKPGIDYLGQLHALGNVQRVEGTTPYAKFLKGEIPV
CCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHCCCCCE
WISYENDGLKAKHVDGMGDALEVIIPKEASVAAPYAISLVKNAPNPNSGKLWLNFIMSEV
EEEECCCCCEEEECCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH
GQGLFAQGFVRPSVPGVRLSADIQAKMPAAPQLRPLDVVKASERKAEIDRLWAQAVLTK
CCCHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]