Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is insI1 [H]

Identifier: 91790169

GI number: 91790169

Start: 4570883

End: 4572043

Strand: Direct

Name: insI1 [H]

Synonym: Bpro_4334

Alternate gene names: 91790169

Gene position: 4570883-4572043 (Clockwise)

Preceding gene: 91790165

Following gene: 91790182

Centisome position: 87.9

GC content: 54.18

Gene sequence:

>1161_bases
ATGAAGTACAGAACAAGGATTTACTATTCAGAGAGCCAGAAGGCTCTGATGTGGGAACGCTGGAAGAAGGGCGAATCCCT
TCAACAGATTGCCCAGTTGTTTGATCGAAACCACTCATCTGTCAGTCGCATCCTGGCTGAGACTGGTGGCATACGCCCGG
CACAACGCTGTCGTTCCCAATTTGCTTTGAGCTTGGCCGAACGGGAAGAGATATCACGCGCATTGGTGGCGGGACAGTCG
ATCCGGTCAATTGCTTCCCAACTTGGGCGAGCTCCGTCAACCGTCAGCCGTGAGATCAAGCGCAACGGTGGCCAAGGCAG
CTACCGTGCGACCCAGGCCGACCAGGCTGCATGGGATAGAGCACATCGTCCCAAACGCTGCAAGCTGGCTCAGAACCGAA
TCTTGGCGCGCGTCGTGGCAGGCAAGCTCCAACGTCAGTGGGCTCCCCAGCAAATTGCAGGATGGCTCAAGCATACTTAC
CCGTGCGACGAGGACTACCACGTGTCACACGAAACCATCTACCGCAGTCTGTTCATTCAAGCCCGAGGCGCATTGAAGAA
GGAACTACTGCAACATTTGAGACGCACCAGGGCCATGCGCCGTTCGCGCCACCACACCCAGAAGACAGACAACCACGGCA
AGATCACCAACGCCGTGTCCATCAGCGAGCGTCCAGCCTCGGTGGAGGATCGGGCCGTACCAGGCCACTGGGAAGGCGAC
TTGCTGTTTGGTAACCTTAACACCCAGATTGCGACACTGGTTGAGCGGCAGACGCGTTACGTGATGCTGGTGAAGGTTGC
AAGTAAAGATACCCAGACGGTCATCAATGCACTTATCAAAAACGCTCGCAAGTTGCCCCAGGAACTCTACAAGTCGTTGA
CTTGGGATCGGGGCAAAGAAATGGCTGACCACAAACGTTTCACATTGGCCACCGACATCAGCGTTTACTTCTGTGATCCC
CAGAGTCCTTGGCAGCGTGGGAGCAATGAAAATACGAATGGACTATTGCGGCAGTATTTCCCCAAGGGAATCGATATCTC
GAATTACTCACAGGCACAGTTAAATGCAATTGCGAGAAAACTGAACGAACGCCCAAGGAAAACTCTAAACTACGAAACGC
CCGCTGAACGATTCAGCCAACTTGTTGCATCGACCGGTTGA

Upstream 100 bases:

>100_bases
TTTTTTTTTGCCATGAAGGCGTGAAAGCCTGCTATATGCCTTGGATTCAACCGGTCGATGCAACACATTAAATACTGCGT
GAGCAGTAGGAGTGTTGCAG

Downstream 100 bases:

>100_bases
ATCCAAGGCCCACAACAGACACAACAGATAATTGGGGCAAGAGCCAAGCCAAATAAAAATCAGCAGATTGCGTTTTACTT
ATATTCAGTTCGGCAACCCA

Product: Fis family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKYRTRIYYSESQKALMWERWKKGESLQQIAQLFDRNHSSVSRILAETGGIRPAQRCRSQFALSLAEREEISRALVAGQS
IRSIASQLGRAPSTVSREIKRNGGQGSYRATQADQAAWDRAHRPKRCKLAQNRILARVVAGKLQRQWAPQQIAGWLKHTY
PCDEDYHVSHETIYRSLFIQARGALKKELLQHLRRTRAMRRSRHHTQKTDNHGKITNAVSISERPASVEDRAVPGHWEGD
LLFGNLNTQIATLVERQTRYVMLVKVASKDTQTVINALIKNARKLPQELYKSLTWDRGKEMADHKRFTLATDISVYFCDP
QSPWQRGSNENTNGLLRQYFPKGIDISNYSQAQLNAIARKLNERPRKTLNYETPAERFSQLVASTG

Sequences:

>Translated_386_residues
MKYRTRIYYSESQKALMWERWKKGESLQQIAQLFDRNHSSVSRILAETGGIRPAQRCRSQFALSLAEREEISRALVAGQS
IRSIASQLGRAPSTVSREIKRNGGQGSYRATQADQAAWDRAHRPKRCKLAQNRILARVVAGKLQRQWAPQQIAGWLKHTY
PCDEDYHVSHETIYRSLFIQARGALKKELLQHLRRTRAMRRSRHHTQKTDNHGKITNAVSISERPASVEDRAVPGHWEGD
LLFGNLNTQIATLVERQTRYVMLVKVASKDTQTVINALIKNARKLPQELYKSLTWDRGKEMADHKRFTLATDISVYFCDP
QSPWQRGSNENTNGLLRQYFPKGIDISNYSQAQLNAIARKLNERPRKTLNYETPAERFSQLVASTG
>Mature_386_residues
MKYRTRIYYSESQKALMWERWKKGESLQQIAQLFDRNHSSVSRILAETGGIRPAQRCRSQFALSLAEREEISRALVAGQS
IRSIASQLGRAPSTVSREIKRNGGQGSYRATQADQAAWDRAHRPKRCKLAQNRILARVVAGKLQRQWAPQQIAGWLKHTY
PCDEDYHVSHETIYRSLFIQARGALKKELLQHLRRTRAMRRSRHHTQKTDNHGKITNAVSISERPASVEDRAVPGHWEGD
LLFGNLNTQIATLVERQTRYVMLVKVASKDTQTVINALIKNARKLPQELYKSLTWDRGKEMADHKRFTLATDISVYFCDP
QSPWQRGSNENTNGLLRQYFPKGIDISNYSQAQLNAIARKLNERPRKTLNYETPAERFSQLVASTG

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786450, Length=378, Percent_Identity=46.5608465608466, Blast_Score=357, Evalue=1e-100,
Organism=Escherichia coli, GI1790736, Length=378, Percent_Identity=46.2962962962963, Blast_Score=355, Evalue=2e-99,
Organism=Escherichia coli, GI1787671, Length=378, Percent_Identity=46.2962962962963, Blast_Score=355, Evalue=2e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 44323; Mature: 44323

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: PS50994 INTEGRASE ; PS01043 TRANSPOSASE_IS30

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYRTRIYYSESQKALMWERWKKGESLQQIAQLFDRNHSSVSRILAETGGIRPAQRCRSQ
CCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH
FALSLAEREEISRALVAGQSIRSIASQLGRAPSTVSREIKRNGGQGSYRATQADQAAWDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH
AHRPKRCKLAQNRILARVVAGKLQRQWAPQQIAGWLKHTYPCDEDYHVSHETIYRSLFIQ
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
ARGALKKELLQHLRRTRAMRRSRHHTQKTDNHGKITNAVSISERPASVEDRAVPGHWEGD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECEEECCCCCCCCCCCCCCCCCCCC
LLFGNLNTQIATLVERQTRYVMLVKVASKDTQTVINALIKNARKLPQELYKSLTWDRGKE
EEEECCCHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHH
MADHKRFTLATDISVYFCDPQSPWQRGSNENTNGLLRQYFPKGIDISNYSQAQLNAIARK
HHHCCCEEEEEEEEEEEECCCCHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
LNERPRKTLNYETPAERFSQLVASTG
HHHCHHHHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKYRTRIYYSESQKALMWERWKKGESLQQIAQLFDRNHSSVSRILAETGGIRPAQRCRSQ
CCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH
FALSLAEREEISRALVAGQSIRSIASQLGRAPSTVSREIKRNGGQGSYRATQADQAAWDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH
AHRPKRCKLAQNRILARVVAGKLQRQWAPQQIAGWLKHTYPCDEDYHVSHETIYRSLFIQ
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
ARGALKKELLQHLRRTRAMRRSRHHTQKTDNHGKITNAVSISERPASVEDRAVPGHWEGD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECEEECCCCCCCCCCCCCCCCCCCC
LLFGNLNTQIATLVERQTRYVMLVKVASKDTQTVINALIKNARKLPQELYKSLTWDRGKE
EEEECCCHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHH
MADHKRFTLATDISVYFCDPQSPWQRGSNENTNGLLRQYFPKGIDISNYSQAQLNAIARK
HHHCCCEEEEEEEEEEEECCCCHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
LNERPRKTLNYETPAERFSQLVASTG
HHHCHHHHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]