| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is insI1 [H]
Identifier: 91790169
GI number: 91790169
Start: 4570883
End: 4572043
Strand: Direct
Name: insI1 [H]
Synonym: Bpro_4334
Alternate gene names: 91790169
Gene position: 4570883-4572043 (Clockwise)
Preceding gene: 91790165
Following gene: 91790182
Centisome position: 87.9
GC content: 54.18
Gene sequence:
>1161_bases ATGAAGTACAGAACAAGGATTTACTATTCAGAGAGCCAGAAGGCTCTGATGTGGGAACGCTGGAAGAAGGGCGAATCCCT TCAACAGATTGCCCAGTTGTTTGATCGAAACCACTCATCTGTCAGTCGCATCCTGGCTGAGACTGGTGGCATACGCCCGG CACAACGCTGTCGTTCCCAATTTGCTTTGAGCTTGGCCGAACGGGAAGAGATATCACGCGCATTGGTGGCGGGACAGTCG ATCCGGTCAATTGCTTCCCAACTTGGGCGAGCTCCGTCAACCGTCAGCCGTGAGATCAAGCGCAACGGTGGCCAAGGCAG CTACCGTGCGACCCAGGCCGACCAGGCTGCATGGGATAGAGCACATCGTCCCAAACGCTGCAAGCTGGCTCAGAACCGAA TCTTGGCGCGCGTCGTGGCAGGCAAGCTCCAACGTCAGTGGGCTCCCCAGCAAATTGCAGGATGGCTCAAGCATACTTAC CCGTGCGACGAGGACTACCACGTGTCACACGAAACCATCTACCGCAGTCTGTTCATTCAAGCCCGAGGCGCATTGAAGAA GGAACTACTGCAACATTTGAGACGCACCAGGGCCATGCGCCGTTCGCGCCACCACACCCAGAAGACAGACAACCACGGCA AGATCACCAACGCCGTGTCCATCAGCGAGCGTCCAGCCTCGGTGGAGGATCGGGCCGTACCAGGCCACTGGGAAGGCGAC TTGCTGTTTGGTAACCTTAACACCCAGATTGCGACACTGGTTGAGCGGCAGACGCGTTACGTGATGCTGGTGAAGGTTGC AAGTAAAGATACCCAGACGGTCATCAATGCACTTATCAAAAACGCTCGCAAGTTGCCCCAGGAACTCTACAAGTCGTTGA CTTGGGATCGGGGCAAAGAAATGGCTGACCACAAACGTTTCACATTGGCCACCGACATCAGCGTTTACTTCTGTGATCCC CAGAGTCCTTGGCAGCGTGGGAGCAATGAAAATACGAATGGACTATTGCGGCAGTATTTCCCCAAGGGAATCGATATCTC GAATTACTCACAGGCACAGTTAAATGCAATTGCGAGAAAACTGAACGAACGCCCAAGGAAAACTCTAAACTACGAAACGC CCGCTGAACGATTCAGCCAACTTGTTGCATCGACCGGTTGA
Upstream 100 bases:
>100_bases TTTTTTTTTGCCATGAAGGCGTGAAAGCCTGCTATATGCCTTGGATTCAACCGGTCGATGCAACACATTAAATACTGCGT GAGCAGTAGGAGTGTTGCAG
Downstream 100 bases:
>100_bases ATCCAAGGCCCACAACAGACACAACAGATAATTGGGGCAAGAGCCAAGCCAAATAAAAATCAGCAGATTGCGTTTTACTT ATATTCAGTTCGGCAACCCA
Product: Fis family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MKYRTRIYYSESQKALMWERWKKGESLQQIAQLFDRNHSSVSRILAETGGIRPAQRCRSQFALSLAEREEISRALVAGQS IRSIASQLGRAPSTVSREIKRNGGQGSYRATQADQAAWDRAHRPKRCKLAQNRILARVVAGKLQRQWAPQQIAGWLKHTY PCDEDYHVSHETIYRSLFIQARGALKKELLQHLRRTRAMRRSRHHTQKTDNHGKITNAVSISERPASVEDRAVPGHWEGD LLFGNLNTQIATLVERQTRYVMLVKVASKDTQTVINALIKNARKLPQELYKSLTWDRGKEMADHKRFTLATDISVYFCDP QSPWQRGSNENTNGLLRQYFPKGIDISNYSQAQLNAIARKLNERPRKTLNYETPAERFSQLVASTG
Sequences:
>Translated_386_residues MKYRTRIYYSESQKALMWERWKKGESLQQIAQLFDRNHSSVSRILAETGGIRPAQRCRSQFALSLAEREEISRALVAGQS IRSIASQLGRAPSTVSREIKRNGGQGSYRATQADQAAWDRAHRPKRCKLAQNRILARVVAGKLQRQWAPQQIAGWLKHTY PCDEDYHVSHETIYRSLFIQARGALKKELLQHLRRTRAMRRSRHHTQKTDNHGKITNAVSISERPASVEDRAVPGHWEGD LLFGNLNTQIATLVERQTRYVMLVKVASKDTQTVINALIKNARKLPQELYKSLTWDRGKEMADHKRFTLATDISVYFCDP QSPWQRGSNENTNGLLRQYFPKGIDISNYSQAQLNAIARKLNERPRKTLNYETPAERFSQLVASTG >Mature_386_residues MKYRTRIYYSESQKALMWERWKKGESLQQIAQLFDRNHSSVSRILAETGGIRPAQRCRSQFALSLAEREEISRALVAGQS IRSIASQLGRAPSTVSREIKRNGGQGSYRATQADQAAWDRAHRPKRCKLAQNRILARVVAGKLQRQWAPQQIAGWLKHTY PCDEDYHVSHETIYRSLFIQARGALKKELLQHLRRTRAMRRSRHHTQKTDNHGKITNAVSISERPASVEDRAVPGHWEGD LLFGNLNTQIATLVERQTRYVMLVKVASKDTQTVINALIKNARKLPQELYKSLTWDRGKEMADHKRFTLATDISVYFCDP QSPWQRGSNENTNGLLRQYFPKGIDISNYSQAQLNAIARKLNERPRKTLNYETPAERFSQLVASTG
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: COG2826
COG function: function code L; Transposase and inactivated derivatives, IS30 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
Organism=Escherichia coli, GI1786450, Length=378, Percent_Identity=46.5608465608466, Blast_Score=357, Evalue=1e-100, Organism=Escherichia coli, GI1790736, Length=378, Percent_Identity=46.2962962962963, Blast_Score=355, Evalue=2e-99, Organism=Escherichia coli, GI1787671, Length=378, Percent_Identity=46.2962962962963, Blast_Score=355, Evalue=2e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001584 - InterPro: IPR012337 - InterPro: IPR001598 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 44323; Mature: 44323
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: PS50994 INTEGRASE ; PS01043 TRANSPOSASE_IS30
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYRTRIYYSESQKALMWERWKKGESLQQIAQLFDRNHSSVSRILAETGGIRPAQRCRSQ CCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH FALSLAEREEISRALVAGQSIRSIASQLGRAPSTVSREIKRNGGQGSYRATQADQAAWDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH AHRPKRCKLAQNRILARVVAGKLQRQWAPQQIAGWLKHTYPCDEDYHVSHETIYRSLFIQ CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH ARGALKKELLQHLRRTRAMRRSRHHTQKTDNHGKITNAVSISERPASVEDRAVPGHWEGD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECEEECCCCCCCCCCCCCCCCCCCC LLFGNLNTQIATLVERQTRYVMLVKVASKDTQTVINALIKNARKLPQELYKSLTWDRGKE EEEECCCHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHH MADHKRFTLATDISVYFCDPQSPWQRGSNENTNGLLRQYFPKGIDISNYSQAQLNAIARK HHHCCCEEEEEEEEEEEECCCCHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHH LNERPRKTLNYETPAERFSQLVASTG HHHCHHHHCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MKYRTRIYYSESQKALMWERWKKGESLQQIAQLFDRNHSSVSRILAETGGIRPAQRCRSQ CCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH FALSLAEREEISRALVAGQSIRSIASQLGRAPSTVSREIKRNGGQGSYRATQADQAAWDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH AHRPKRCKLAQNRILARVVAGKLQRQWAPQQIAGWLKHTYPCDEDYHVSHETIYRSLFIQ CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH ARGALKKELLQHLRRTRAMRRSRHHTQKTDNHGKITNAVSISERPASVEDRAVPGHWEGD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECEEECCCCCCCCCCCCCCCCCCCC LLFGNLNTQIATLVERQTRYVMLVKVASKDTQTVINALIKNARKLPQELYKSLTWDRGKE EEEECCCHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHH MADHKRFTLATDISVYFCDPQSPWQRGSNENTNGLLRQYFPKGIDISNYSQAQLNAIARK HHHCCCEEEEEEEEEEEECCCCHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHH LNERPRKTLNYETPAERFSQLVASTG HHHCHHHHCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]