| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91790165
Identifier: 91790165
GI number: 91790165
Start: 4565075
End: 4566634
Strand: Direct
Name: 91790165
Synonym: Bpro_4329
Alternate gene names: NA
Gene position: 4565075-4566634 (Clockwise)
Preceding gene: 91790164
Following gene: 91790169
Centisome position: 87.79
GC content: 57.18
Gene sequence:
>1560_bases TTGTTTCGCGGCTATACGGTTTGCTTTGTCGGTTACAGCATCAACGATCCGGTTCTGCGGTACATGATGGATGCGCTGGC GGCGGACCGGTTGCTGGGAGAGTCGCCACCGGAAATGTTCGCGTTTGGCAGCTATACGAACGGAAAAGAGGTAGATAGAG CCAACGAGTGGAATGCAAAGAACGTTACCCCGATTCTGTATCGGGAGCGAAAGGGACACGACCATTCCTATTTGCACAGC ACGCTTCGCGCGTGGGCTGAGACGTATCGGGACGGGGTTCGCGGCAAAGAACGAATTGTTGTGGAATGTGCGATAGGGCG CCCCCTCGCGGCCACGAAACAAGATGACTTTGTCGGTCGCATGTTATGGGCGCTGAGCGATCCGCGTGGCTTGCCCGCCA AGCGATTTGCGGAACTGGACCCGGTTCCGTCACTTGACTGGCTAGAGCCGCTGAGTCAGGACTTCTATCGTCATGAGGAC TTGGGACGTTTTGGCGTGCCGGCATTGGCTGACGCCGACAAAAAGCTCGAATTCAGTTTTACCCGACGCCCTGCACCTTA CACAAAGGCGCCGTGGATGGTGCTATCTGATAGCGGGAACCGGACCAGCGAATGGGATGCGCCAATGCATCATCTCGCGT GCTGGCTAGTGCGGCACCTGGACGATCCGAAGCTGCTATTGTGGCTCGTAAAACGCGGCGGCAGGTTGCACCACCAGTTG ACATGGCTCGTAGAGCGGCGCCTCGATGAGTTGGCCAAACTTGAACGCACGGGTGATGCGAAGGCGCTTGCGCGTATTCG CGACAACTCTCCCAGAGCGATTCCGCGAGCCGCAATGCGCACGCTGTGGCGCCTGTTGCTGAATGGGCGGGTGAGAGCCG GGGCGCGCAACTTCGATCTCTACAGATGGAGGGAACAATTTAAACGGGATGGGCTGACCGCGAGCGTGCGATTGGCGTTA AAGGACGCCTTGGCGCCCTGTGTTGCGCTGCGCGAGCCGTTCCACTGGTCCGACGAGACGGTAGTGAGCGACGAAACAGA TCGAGTCAAGGCTATTGTTGATTGGGAGCTAGAGCTGGCATCGGATCATGTGCATTCTGGAATGGGCGACATCCGTGAGG ATCGGCGTTGGCTGGATGCTCTCCCTCATTTACTACTCGACTTCAACGTGCTTCTGCACGATGCACTTGATTTGATGCAG GAGTTGGGCGACGCGGATGGACGGGGGGATCATAGCTACGCTCACCAACCCTCTATATCCAAGCATCCGCAAAACAGGAA CTTTCATGACTGGACTGCTCTGATCGAGTTGGCTCGTGATGCTTGGGTTGCGACTTCGTCTCGAGCACCTGAGCAGGCTC GAGCTGTTGCTGAGGCATGGGCGTACGGGCCTTATCCTGTTTTCCGCAGATTGTCATTTTTCACTGGTACGCACATCGAT GTCATCCCACCGACGACAGCTTTGCGCTTCCTCCTCGATGGTGAGAACTGGTGGCTGTGGTCGGTGGAGACTCAGCGTGA AGCCATGCGCTTAAGTACGCTAAACCGAAGTCCCCGCTAG
Upstream 100 bases:
>100_bases ATAAGAATGGCCGTTTCCAGCTCATCGAGCGACTCCCGAGCTAGCACTGGCGCTAGAGCAACGACTAACGGAACGCTGGG CGGCGCGCTTCGTAAGTGAG
Downstream 100 bases:
>100_bases AAATCACCAAGCGGTCCAACTCTGCGGGCTTTGGCGCGGCTGATAACAGGCCATGCAGGTAGACCAAGCCGTCCCACCTT GCTTTGGGCACCGGAAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 519; Mature: 519
Protein sequence:
>519_residues MFRGYTVCFVGYSINDPVLRYMMDALAADRLLGESPPEMFAFGSYTNGKEVDRANEWNAKNVTPILYRERKGHDHSYLHS TLRAWAETYRDGVRGKERIVVECAIGRPLAATKQDDFVGRMLWALSDPRGLPAKRFAELDPVPSLDWLEPLSQDFYRHED LGRFGVPALADADKKLEFSFTRRPAPYTKAPWMVLSDSGNRTSEWDAPMHHLACWLVRHLDDPKLLLWLVKRGGRLHHQL TWLVERRLDELAKLERTGDAKALARIRDNSPRAIPRAAMRTLWRLLLNGRVRAGARNFDLYRWREQFKRDGLTASVRLAL KDALAPCVALREPFHWSDETVVSDETDRVKAIVDWELELASDHVHSGMGDIREDRRWLDALPHLLLDFNVLLHDALDLMQ ELGDADGRGDHSYAHQPSISKHPQNRNFHDWTALIELARDAWVATSSRAPEQARAVAEAWAYGPYPVFRRLSFFTGTHID VIPPTTALRFLLDGENWWLWSVETQREAMRLSTLNRSPR
Sequences:
>Translated_519_residues MFRGYTVCFVGYSINDPVLRYMMDALAADRLLGESPPEMFAFGSYTNGKEVDRANEWNAKNVTPILYRERKGHDHSYLHS TLRAWAETYRDGVRGKERIVVECAIGRPLAATKQDDFVGRMLWALSDPRGLPAKRFAELDPVPSLDWLEPLSQDFYRHED LGRFGVPALADADKKLEFSFTRRPAPYTKAPWMVLSDSGNRTSEWDAPMHHLACWLVRHLDDPKLLLWLVKRGGRLHHQL TWLVERRLDELAKLERTGDAKALARIRDNSPRAIPRAAMRTLWRLLLNGRVRAGARNFDLYRWREQFKRDGLTASVRLAL KDALAPCVALREPFHWSDETVVSDETDRVKAIVDWELELASDHVHSGMGDIREDRRWLDALPHLLLDFNVLLHDALDLMQ ELGDADGRGDHSYAHQPSISKHPQNRNFHDWTALIELARDAWVATSSRAPEQARAVAEAWAYGPYPVFRRLSFFTGTHID VIPPTTALRFLLDGENWWLWSVETQREAMRLSTLNRSPR >Mature_519_residues MFRGYTVCFVGYSINDPVLRYMMDALAADRLLGESPPEMFAFGSYTNGKEVDRANEWNAKNVTPILYRERKGHDHSYLHS TLRAWAETYRDGVRGKERIVVECAIGRPLAATKQDDFVGRMLWALSDPRGLPAKRFAELDPVPSLDWLEPLSQDFYRHED LGRFGVPALADADKKLEFSFTRRPAPYTKAPWMVLSDSGNRTSEWDAPMHHLACWLVRHLDDPKLLLWLVKRGGRLHHQL TWLVERRLDELAKLERTGDAKALARIRDNSPRAIPRAAMRTLWRLLLNGRVRAGARNFDLYRWREQFKRDGLTASVRLAL KDALAPCVALREPFHWSDETVVSDETDRVKAIVDWELELASDHVHSGMGDIREDRRWLDALPHLLLDFNVLLHDALDLMQ ELGDADGRGDHSYAHQPSISKHPQNRNFHDWTALIELARDAWVATSSRAPEQARAVAEAWAYGPYPVFRRLSFFTGTHID VIPPTTALRFLLDGENWWLWSVETQREAMRLSTLNRSPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59796; Mature: 59796
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRGYTVCFVGYSINDPVLRYMMDALAADRLLGESPPEMFAFGSYTNGKEVDRANEWNAK CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCCCCCCCCCCC NVTPILYRERKGHDHSYLHSTLRAWAETYRDGVRGKERIVVECAIGRPLAATKQDDFVGR CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHH MLWALSDPRGLPAKRFAELDPVPSLDWLEPLSQDFYRHEDLGRFGVPALADADKKLEFSF HHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEE TRRPAPYTKAPWMVLSDSGNRTSEWDAPMHHLACWLVRHLDDPKLLLWLVKRGGRLHHQL CCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHH TWLVERRLDELAKLERTGDAKALARIRDNSPRAIPRAAMRTLWRLLLNGRVRAGARNFDL HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHH YRWREQFKRDGLTASVRLALKDALAPCVALREPFHWSDETVVSDETDRVKAIVDWELELA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEEEEEHHHH SDHVHSGMGDIREDRRWLDALPHLLLDFNVLLHDALDLMQELGDADGRGDHSYAHQPSIS HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC KHPQNRNFHDWTALIELARDAWVATSSRAPEQARAVAEAWAYGPYPVFRRLSFFTGTHID CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEE VIPPTTALRFLLDGENWWLWSVETQREAMRLSTLNRSPR EECCHHHEEEEECCCCEEEEEEHHHHHHHHHHHHCCCCC >Mature Secondary Structure MFRGYTVCFVGYSINDPVLRYMMDALAADRLLGESPPEMFAFGSYTNGKEVDRANEWNAK CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCCCCCCCCCCC NVTPILYRERKGHDHSYLHSTLRAWAETYRDGVRGKERIVVECAIGRPLAATKQDDFVGR CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHH MLWALSDPRGLPAKRFAELDPVPSLDWLEPLSQDFYRHEDLGRFGVPALADADKKLEFSF HHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEE TRRPAPYTKAPWMVLSDSGNRTSEWDAPMHHLACWLVRHLDDPKLLLWLVKRGGRLHHQL CCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHH TWLVERRLDELAKLERTGDAKALARIRDNSPRAIPRAAMRTLWRLLLNGRVRAGARNFDL HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHH YRWREQFKRDGLTASVRLALKDALAPCVALREPFHWSDETVVSDETDRVKAIVDWELELA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEEEEEHHHH SDHVHSGMGDIREDRRWLDALPHLLLDFNVLLHDALDLMQELGDADGRGDHSYAHQPSIS HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC KHPQNRNFHDWTALIELARDAWVATSSRAPEQARAVAEAWAYGPYPVFRRLSFFTGTHID CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEE VIPPTTALRFLLDGENWWLWSVETQREAMRLSTLNRSPR EECCHHHEEEEECCCCEEEEEEHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA