| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790160
Identifier: 91790160
GI number: 91790160
Start: 4556355
End: 4557176
Strand: Direct
Name: 91790160
Synonym: Bpro_4324
Alternate gene names: NA
Gene position: 4556355-4557176 (Clockwise)
Preceding gene: 91790159
Following gene: 91790163
Centisome position: 87.62
GC content: 61.07
Gene sequence:
>822_bases ATGAGGAAACTGCTCCGTGTACTTCTTGCCTGTCTCGCGGCGCCGCTCTTGCACTGCGCGTGGGCGCAACCGGCAACGGG CAAGACCGAGGTGCTGTGGCTGGGGCAATCCGCCTTTCGCATCAGCACACCGGGCGGCAAGGTCATCGTCACCGACCCCT GGCTGAAACTGAACCCGCTGACGCCCGCCGAGTACAAGAACCTGCAGGCCTTGGGCAAGGTCGACGTCATCCTCGTGACG CACGGCCACTGGGACCATTTTGCCGACGCGCCGGAGCTCGCCTTACTCAATCAGGTTCCGATGCATGCACCGGGCGACAT GAACCAGACCGTGGGTCTTCTGGGCATTCTTCCGCCCAACCTGGTGCCGCGTTTCAACAAGAGCGGCACCATCACGCCGG CGCCAGGCATCAAGGTAACGGCAGTCAAGGCAGAGCACTCCTCCGTCATTGTCTGGAAAAATCCTTCCACGGGTAAAGAC GAATCACACCCTGGCGGAGAACCGGTCGGTTTTATCATTGAGCTGGAGAACGGGTTTCGCATCTACCACATGGGTGACAC TGGCCTTTTCAGCGACATGCGTTTCATCGCCGAGTATTACAAACCGGACCTCGTACTGATGCCGATCGGCGGCCACTTCA CCATGGGCCCCGCCGACGCCGCCTACGCCACCCGCGAATGGCTCAAGCCCAAGACCGTGATTCCAATGCACTATGGCGCC AATCCGCTGGGCCGGGGAACACCGACGGAATACATGCGCGCACTGGGCGATTCCGGAACGCGCGTGCTTCCACTCAAGCC TGGCGAAAAGGCGGAGTTCTGA
Upstream 100 bases:
>100_bases GTCTTCAGCCAACTGATCGGCAAAGAGATTCCGCGCTGGGAGAAGGTGATCAAAAGCGCCCAGATCAAGCTCGACTGATT TCAAAAAGAGAGTGCAACCG
Downstream 100 bases:
>100_bases AGCACTCCGCTGCAAGCAGTCTTTCAAAGCTTTCCGTGTTGTCGTCAACCAATTAATGCCTGCTTTTGCTGATTTCCGGC TGCGGAAAAAACCGACACAT
Product: beta-lactamase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MRKLLRVLLACLAAPLLHCAWAQPATGKTEVLWLGQSAFRISTPGGKVIVTDPWLKLNPLTPAEYKNLQALGKVDVILVT HGHWDHFADAPELALLNQVPMHAPGDMNQTVGLLGILPPNLVPRFNKSGTITPAPGIKVTAVKAEHSSVIVWKNPSTGKD ESHPGGEPVGFIIELENGFRIYHMGDTGLFSDMRFIAEYYKPDLVLMPIGGHFTMGPADAAYATREWLKPKTVIPMHYGA NPLGRGTPTEYMRALGDSGTRVLPLKPGEKAEF
Sequences:
>Translated_273_residues MRKLLRVLLACLAAPLLHCAWAQPATGKTEVLWLGQSAFRISTPGGKVIVTDPWLKLNPLTPAEYKNLQALGKVDVILVT HGHWDHFADAPELALLNQVPMHAPGDMNQTVGLLGILPPNLVPRFNKSGTITPAPGIKVTAVKAEHSSVIVWKNPSTGKD ESHPGGEPVGFIIELENGFRIYHMGDTGLFSDMRFIAEYYKPDLVLMPIGGHFTMGPADAAYATREWLKPKTVIPMHYGA NPLGRGTPTEYMRALGDSGTRVLPLKPGEKAEF >Mature_273_residues MRKLLRVLLACLAAPLLHCAWAQPATGKTEVLWLGQSAFRISTPGGKVIVTDPWLKLNPLTPAEYKNLQALGKVDVILVT HGHWDHFADAPELALLNQVPMHAPGDMNQTVGLLGILPPNLVPRFNKSGTITPAPGIKVTAVKAEHSSVIVWKNPSTGKD ESHPGGEPVGFIIELENGFRIYHMGDTGLFSDMRFIAEYYKPDLVLMPIGGHFTMGPADAAYATREWLKPKTVIPMHYGA NPLGRGTPTEYMRALGDSGTRVLPLKPGEKAEF
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0173 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4324_POLSJ (Q123S8)
Other databases:
- EMBL: CP000316 - RefSeq: YP_551112.1 - ProteinModelPortal: Q123S8 - STRING: Q123S8 - GeneID: 4013010 - GenomeReviews: CP000316_GR - KEGG: pol:Bpro_4324 - NMPDR: fig|296591.1.peg.932 - eggNOG: COG2220 - HOGENOM: HBG741314 - OMA: IWHMGDT - ProtClustDB: CLSK723726 - BioCyc: PSP296591:BPRO_4324-MONOMER - HAMAP: MF_00457 - InterPro: IPR001279 - InterPro: IPR022877 - SMART: SM00849
Pfam domain/function: PF00753 Lactamase_B
EC number: NA
Molecular weight: Translated: 29724; Mature: 29724
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLLRVLLACLAAPLLHCAWAQPATGKTEVLWLGQSAFRISTPGGKVIVTDPWLKLNPL CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCCCEEEEECCCEEECCC TPAEYKNLQALGKVDVILVTHGHWDHFADAPELALLNQVPMHAPGDMNQTVGLLGILPPN CCHHHHHHHHCCCEEEEEEECCCCHHHCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCCC LVPRFNKSGTITPAPGIKVTAVKAEHSSVIVWKNPSTGKDESHPGGEPVGFIIELENGFR CCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCEE IYHMGDTGLFSDMRFIAEYYKPDLVLMPIGGHFTMGPADAAYATREWLKPKTVIPMHYGA EEEECCCCHHHHHHHHHHHHCCCEEEEECCCCEECCCCHHHHHHHHHCCCCEEEEEECCC NPLGRGTPTEYMRALGDSGTRVLPLKPGEKAEF CCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCC >Mature Secondary Structure MRKLLRVLLACLAAPLLHCAWAQPATGKTEVLWLGQSAFRISTPGGKVIVTDPWLKLNPL CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCCCEEEEECCCEEECCC TPAEYKNLQALGKVDVILVTHGHWDHFADAPELALLNQVPMHAPGDMNQTVGLLGILPPN CCHHHHHHHHCCCEEEEEEECCCCHHHCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCCC LVPRFNKSGTITPAPGIKVTAVKAEHSSVIVWKNPSTGKDESHPGGEPVGFIIELENGFR CCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCEE IYHMGDTGLFSDMRFIAEYYKPDLVLMPIGGHFTMGPADAAYATREWLKPKTVIPMHYGA EEEECCCCHHHHHHHHHHHHCCCEEEEECCCCEECCCCHHHHHHHHHCCCCEEEEEECCC NPLGRGTPTEYMRALGDSGTRVLPLKPGEKAEF CCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA