| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yitW [H]
Identifier: 91790112
GI number: 91790112
Start: 4506008
End: 4506394
Strand: Direct
Name: yitW [H]
Synonym: Bpro_4274
Alternate gene names: 91790112
Gene position: 4506008-4506394 (Clockwise)
Preceding gene: 91790111
Following gene: 91790113
Centisome position: 86.65
GC content: 67.18
Gene sequence:
>387_bases ATGAACATTTTCGATTTGATACACCAGGCCAAGGAGGCCGTTGCCCCGCCCCCTGCTGCGCCCGCTGCCACGCCCCCCGT CACGGGCTTGCAGGCGCGCGTGATCGAGGCCCTGCGAGGCGTGTTTGACCCGGAAATCCCGGTCAACATCTACGACCTGG GCCTCGTCTACGGTCTGGACGTGGACGAGGCCTTGGGCAAGGTGCATATCCGCCTGACACTGACCGCCCCCGGCTGCCCG GTGGCGCAGACCTTTCCCGAGGTGGTCGGCAGTACCGTCGATGGCGTGCCCGGCGTGAACGAGGTCGAGGTCGAGCTGGT GTGGCAGCCGCCCTGGTCCAAGGGCATGATGAGCGAGGCGGCGCGCCTGCAACTGGGGCTGCTGTGA
Upstream 100 bases:
>100_bases GCGAATTCCCGGTACGGGTGAAATGCGCCACCCTGGCCTGGCATACGCTGCGCGCGGCGCTGCGCGAGGTCAGCCAGCCG GTTTCGACGGAGTGAATGCG
Downstream 100 bases:
>100_bases TGGCCGACTGGACCGACGTCGCCCCGGCGGACGGCTTCCCGCCCGGCAGCTGCCGCACCGTGGACGTGGACGGCGTACCC ATCGCCGTGTTCAACGTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MNIFDLIHQAKEAVAPPPAAPAATPPVTGLQARVIEALRGVFDPEIPVNIYDLGLVYGLDVDEALGKVHIRLTLTAPGCP VAQTFPEVVGSTVDGVPGVNEVEVELVWQPPWSKGMMSEAARLQLGLL
Sequences:
>Translated_128_residues MNIFDLIHQAKEAVAPPPAAPAATPPVTGLQARVIEALRGVFDPEIPVNIYDLGLVYGLDVDEALGKVHIRLTLTAPGCP VAQTFPEVVGSTVDGVPGVNEVEVELVWQPPWSKGMMSEAARLQLGLL >Mature_128_residues MNIFDLIHQAKEAVAPPPAAPAATPPVTGLQARVIEALRGVFDPEIPVNIYDLGLVYGLDVDEALGKVHIRLTLTAPGCP VAQTFPEVVGSTVDGVPGVNEVEVELVWQPPWSKGMMSEAARLQLGLL
Specific function: Unknown
COG id: COG2151
COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MIP18 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002744 [H]
Pfam domain/function: PF01883 DUF59 [H]
EC number: NA
Molecular weight: Translated: 13573; Mature: 13573
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIFDLIHQAKEAVAPPPAAPAATPPVTGLQARVIEALRGVFDPEIPVNIYDLGLVYGLD CCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCC VDEALGKVHIRLTLTAPGCPVAQTFPEVVGSTVDGVPGVNEVEVELVWQPPWSKGMMSEA HHHHHCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH ARLQLGLL HHHHCCCC >Mature Secondary Structure MNIFDLIHQAKEAVAPPPAAPAATPPVTGLQARVIEALRGVFDPEIPVNIYDLGLVYGLD CCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCC VDEALGKVHIRLTLTAPGCPVAQTFPEVVGSTVDGVPGVNEVEVELVWQPPWSKGMMSEA HHHHHCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH ARLQLGLL HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353931; 9025291; 9384377 [H]