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The map label for this gene is nifU [H]

Identifier: 91790111

GI number: 91790111

Start: 4505553

End: 4506002

Strand: Direct

Name: nifU [H]

Synonym: Bpro_4273

Alternate gene names: 91790111

Gene position: 4505553-4506002 (Clockwise)

Preceding gene: 91790110

Following gene: 91790112

Centisome position: 86.64

GC content: 65.78

Gene sequence:

>450_bases
ATGTCTGACTTGCGCGATCTGTATCAGGAACTCATCGTTGACCACTACCGCCACCCGCACAATTTCGGGCCACTGGCGGG
GGCCAACCGCCGCGCCGAGGGTTTCAATCCGCTGTGCGGCGACCGGCTGACGCTTTACCTCCAGGTCGTGGACGGCGTGA
TCGAAAACGCCCGCTTCGAAGGCTCGGGCTGCGCCATTTCCACCGCCTCGGCATCGCTGATGACCGACGCCCTGAAGGGC
AAGACCGAAACTGAGGTCGAGAACCTGTTCGCCAGTTTTCACGCGCTGGTGGCGGGCGGCAGCGACTCGCCATCCACGGT
CGCGCTGGGCAAGCTGGAGGTGCTGGCCGGCGTGCGCGAATTCCCGGTACGGGTGAAATGCGCCACCCTGGCCTGGCATA
CGCTGCGCGCGGCGCTGCGCGAGGTCAGCCAGCCGGTTTCGACGGAGTGA

Upstream 100 bases:

>100_bases
TGCCCGCCACGGTGCGCGCCTCGTTCGCCCTCTACAACACAGTGGAAGAAGTGGATGTGCTGCTGCGCGCGATCCGCAGG
GCGCAGGAGGTATTTGGCTG

Downstream 100 bases:

>100_bases
ATGCGATGAACATTTTCGATTTGATACACCAGGCCAAGGAGGCCGTTGCCCCGCCCCCTGCTGCGCCCGCTGCCACGCCC
CCCGTCACGGGCTTGCAGGC

Product: SUF system FeS assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MSDLRDLYQELIVDHYRHPHNFGPLAGANRRAEGFNPLCGDRLTLYLQVVDGVIENARFEGSGCAISTASASLMTDALKG
KTETEVENLFASFHALVAGGSDSPSTVALGKLEVLAGVREFPVRVKCATLAWHTLRAALREVSQPVSTE

Sequences:

>Translated_149_residues
MSDLRDLYQELIVDHYRHPHNFGPLAGANRRAEGFNPLCGDRLTLYLQVVDGVIENARFEGSGCAISTASASLMTDALKG
KTETEVENLFASFHALVAGGSDSPSTVALGKLEVLAGVREFPVRVKCATLAWHTLRAALREVSQPVSTE
>Mature_148_residues
SDLRDLYQELIVDHYRHPHNFGPLAGANRRAEGFNPLCGDRLTLYLQVVDGVIENARFEGSGCAISTASASLMTDALKGK
TETEVENLFASFHALVAGGSDSPSTVALGKLEVLAGVREFPVRVKCATLAWHTLRAALREVSQPVSTE

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Escherichia coli, GI1788878, Length=136, Percent_Identity=30.1470588235294, Blast_Score=69, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6324800, Length=143, Percent_Identity=29.3706293706294, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 16098; Mature: 15967

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLRDLYQELIVDHYRHPHNFGPLAGANRRAEGFNPLCGDRLTLYLQVVDGVIENARFE
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
GSGCAISTASASLMTDALKGKTETEVENLFASFHALVAGGSDSPSTVALGKLEVLAGVRE
CCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHH
FPVRVKCATLAWHTLRAALREVSQPVSTE
CCCEEHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SDLRDLYQELIVDHYRHPHNFGPLAGANRRAEGFNPLCGDRLTLYLQVVDGVIENARFE
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
GSGCAISTASASLMTDALKGKTETEVENLFASFHALVAGGSDSPSTVALGKLEVLAGVRE
CCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHH
FPVRVKCATLAWHTLRAALREVSQPVSTE
CCCEEHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]