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The map label for this gene is sufD [C]

Identifier: 91790109

GI number: 91790109

Start: 4502858

End: 4504201

Strand: Direct

Name: sufD [C]

Synonym: Bpro_4271

Alternate gene names: 91790109

Gene position: 4502858-4504201 (Clockwise)

Preceding gene: 91790108

Following gene: 91790110

Centisome position: 86.59

GC content: 67.86

Gene sequence:

>1344_bases
ATGAACGTCACCGCCACCGATTTCTACCGCGACGAATTTGCCCGCCTCAAGGCGTCACTGCCCGGCGGGCACCTGCCGTG
GCTGCGCCGCGCGCGCGAAGCAGGGCTGGCGTCTTTCGCCGACACTGGCTTGCCGACGCTGCGGCAGGAGGACTGGAAGT
ACACCAGCGTCGCCGCCATCGAGAAAGGCCGTTTTGTGCTGGCCACGCTGACGCCGCCGACGCCGAACGGTGTCACGGCG
CAGCAGATCGAAGACTGGAGCCTGCCCGACACGCAGCGCCTGGTGTTTGTGAACGGCCACTATCAGCCACGCTGGTCGCG
CATAGCGCCGCTGCCCGCAGGCGTCACGCTGGCCAGCCTCGCCGAGCTGCTGGAACGCGACCCCGAGTGCCTGGAAAGCC
TGCTGGGGCCGACGCCGCACGCCTACCCGTCCGGCTGCTACCCGTCTGCCTTTGCGGCGCTGAACGCGGCCTTCATGAGT
GACGGCGCCTATGTCCATCTGGCCGCTGGCGTGGCGCTCGACACACCGATCCACCTGCTGTTTGTCACCACCGAAGCGGG
CCTGGCGGTGCAGACGCGCAACCTCGTGGTGGCCGACGCCGGCAGCCGGGCCAGCCTGATCGAGCACCATGTGGCCGTCG
GCGAAGGCGCCTACTTCACCAACGTGATCACCGACCTCGTGGCCGGGCGCGACGCCGAAATCGAGCACCACAAGCTGCAG
CAGGAGAGCCTCAAGGCCTTCCACGTCGCCGCGGTGAATGCGGACCAGCAGCATGGCAGCCGCTTCACCTCGCGCTCGTT
CGCACTGGGCGCGGTCCTGGCGCGGATCGATATCGGCGTCGGGCTCAATGCCGAGCACACCACGTGCGCGCTCGACGGGC
TGTACATGACCGACGGCCGCCAGCATATCGACCACCACACCCGCATCGACCATGCCCGGCCGCACGGCACCAGCCGCGAG
TTCTACAAGGGCGTGCTGGCCGGCGCATCCCGCGCGGTGTTCAACGGCAAGGTGATCGTGCATGCCGATGCGCAGCACAG
CGATGCCGATCAGACCAACCGCAACCTGCTGCTGTCGGACAACGCCGAAGTCGATACCAAACCGCAACTGGAGATCTACG
CCGACGACGTGAAATGCAGCCACGGCGCCACCGTCGGCCAGCTCGACCCCGAGCAGATCTTCTACCTGCGCTCGCGCGGC
GTGGACGATGCGTCCGCGCGCGCGCTGCTCACCTTTGCCTTCGCCGAGGAAGTGGTTGACCGGGTGGGCATTGCGCCGCT
GCGGGCGCGGCTGGAGAAGCTGCTGCTGGGGCGCCTGCCCGAGCGGGTGAAGGAGTTGTTATGA

Upstream 100 bases:

>100_bases
GCATCGCGCTGTCCGGCGGGAGAGAGCTGGCGCTGGAGCTGGAAAAACACGGTTACGGCTGGATCGAGGCCGAGACCAGC
CGTCAGGCGGGGGTGGTCTT

Downstream 100 bases:

>100_bases
ACGCCGCCGGGCCGTCCCAAGGCGCGAAGGCCCCCTTGGGGGGCAGCGCAGCACACGAAGTGGCAAGCGTGGGGGCACGT
ATGAACGCCCCAGTGAATGC

Product: FeS assembly protein SufD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MNVTATDFYRDEFARLKASLPGGHLPWLRRAREAGLASFADTGLPTLRQEDWKYTSVAAIEKGRFVLATLTPPTPNGVTA
QQIEDWSLPDTQRLVFVNGHYQPRWSRIAPLPAGVTLASLAELLERDPECLESLLGPTPHAYPSGCYPSAFAALNAAFMS
DGAYVHLAAGVALDTPIHLLFVTTEAGLAVQTRNLVVADAGSRASLIEHHVAVGEGAYFTNVITDLVAGRDAEIEHHKLQ
QESLKAFHVAAVNADQQHGSRFTSRSFALGAVLARIDIGVGLNAEHTTCALDGLYMTDGRQHIDHHTRIDHARPHGTSRE
FYKGVLAGASRAVFNGKVIVHADAQHSDADQTNRNLLLSDNAEVDTKPQLEIYADDVKCSHGATVGQLDPEQIFYLRSRG
VDDASARALLTFAFAEEVVDRVGIAPLRARLEKLLLGRLPERVKELL

Sequences:

>Translated_447_residues
MNVTATDFYRDEFARLKASLPGGHLPWLRRAREAGLASFADTGLPTLRQEDWKYTSVAAIEKGRFVLATLTPPTPNGVTA
QQIEDWSLPDTQRLVFVNGHYQPRWSRIAPLPAGVTLASLAELLERDPECLESLLGPTPHAYPSGCYPSAFAALNAAFMS
DGAYVHLAAGVALDTPIHLLFVTTEAGLAVQTRNLVVADAGSRASLIEHHVAVGEGAYFTNVITDLVAGRDAEIEHHKLQ
QESLKAFHVAAVNADQQHGSRFTSRSFALGAVLARIDIGVGLNAEHTTCALDGLYMTDGRQHIDHHTRIDHARPHGTSRE
FYKGVLAGASRAVFNGKVIVHADAQHSDADQTNRNLLLSDNAEVDTKPQLEIYADDVKCSHGATVGQLDPEQIFYLRSRG
VDDASARALLTFAFAEEVVDRVGIAPLRARLEKLLLGRLPERVKELL
>Mature_447_residues
MNVTATDFYRDEFARLKASLPGGHLPWLRRAREAGLASFADTGLPTLRQEDWKYTSVAAIEKGRFVLATLTPPTPNGVTA
QQIEDWSLPDTQRLVFVNGHYQPRWSRIAPLPAGVTLASLAELLERDPECLESLLGPTPHAYPSGCYPSAFAALNAAFMS
DGAYVHLAAGVALDTPIHLLFVTTEAGLAVQTRNLVVADAGSRASLIEHHVAVGEGAYFTNVITDLVAGRDAEIEHHKLQ
QESLKAFHVAAVNADQQHGSRFTSRSFALGAVLARIDIGVGLNAEHTTCALDGLYMTDGRQHIDHHTRIDHARPHGTSRE
FYKGVLAGASRAVFNGKVIVHADAQHSDADQTNRNLLLSDNAEVDTKPQLEIYADDVKCSHGATVGQLDPEQIFYLRSRG
VDDASARALLTFAFAEEVVDRVGIAPLRARLEKLLLGRLPERVKELL

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=404, Percent_Identity=32.9207920792079, Blast_Score=190, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 48662; Mature: 48662

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVTATDFYRDEFARLKASLPGGHLPWLRRAREAGLASFADTGLPTLRQEDWKYTSVAAI
CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEEEEEE
EKGRFVLATLTPPTPNGVTAQQIEDWSLPDTQRLVFVNGHYQPRWSRIAPLPAGVTLASL
ECCCEEEEEECCCCCCCCCHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHH
AELLERDPECLESLLGPTPHAYPSGCYPSAFAALNAAFMSDGAYVHLAAGVALDTPIHLL
HHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCEEECCCEEEE
FVTTEAGLAVQTRNLVVADAGSRASLIEHHVAVGEGAYFTNVITDLVAGRDAEIEHHKLQ
EEEECCCCEEEECCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHH
QESLKAFHVAAVNADQQHGSRFTSRSFALGAVLARIDIGVGLNAEHTTCALDGLYMTDGR
HHHHHEEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEECCCH
QHIDHHTRIDHARPHGTSREFYKGVLAGASRAVFNGKVIVHADAQHSDADQTNRNLLLSD
HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEECCEEEEEECCCCCCCCCCCCEEEEEC
NAEVDTKPQLEIYADDVKCSHGATVGQLDPEQIFYLRSRGVDDASARALLTFAFAEEVVD
CCCCCCCCCEEEEECCEECCCCCCCCCCCHHHHHEEHHCCCCCHHHHHHHHHHHHHHHHH
RVGIAPLRARLEKLLLGRLPERVKELL
HHCCHHHHHHHHHHHHHHCHHHHHHHC
>Mature Secondary Structure
MNVTATDFYRDEFARLKASLPGGHLPWLRRAREAGLASFADTGLPTLRQEDWKYTSVAAI
CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEEEEEE
EKGRFVLATLTPPTPNGVTAQQIEDWSLPDTQRLVFVNGHYQPRWSRIAPLPAGVTLASL
ECCCEEEEEECCCCCCCCCHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHH
AELLERDPECLESLLGPTPHAYPSGCYPSAFAALNAAFMSDGAYVHLAAGVALDTPIHLL
HHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCEEECCCEEEE
FVTTEAGLAVQTRNLVVADAGSRASLIEHHVAVGEGAYFTNVITDLVAGRDAEIEHHKLQ
EEEECCCCEEEECCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHH
QESLKAFHVAAVNADQQHGSRFTSRSFALGAVLARIDIGVGLNAEHTTCALDGLYMTDGR
HHHHHEEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEECCCH
QHIDHHTRIDHARPHGTSREFYKGVLAGASRAVFNGKVIVHADAQHSDADQTNRNLLLSD
HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEECCEEEEEECCCCCCCCCCCCEEEEEC
NAEVDTKPQLEIYADDVKCSHGATVGQLDPEQIFYLRSRGVDDASARALLTFAFAEEVVD
CCCCCCCCCEEEEECCEECCCCCCCCCCCHHHHHEEHHCCCCCHHHHHHHHHHHHHHHHH
RVGIAPLRARLEKLLLGRLPERVKELL
HHCCHHHHHHHHHHHHHHCHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]