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The map label for this gene is sufC [H]

Identifier: 91790108

GI number: 91790108

Start: 4502091

End: 4502861

Strand: Direct

Name: sufC [H]

Synonym: Bpro_4270

Alternate gene names: 91790108

Gene position: 4502091-4502861 (Clockwise)

Preceding gene: 91790107

Following gene: 91790109

Centisome position: 86.57

GC content: 65.89

Gene sequence:

>771_bases
ATGCTCGAAATCAGAAACCTGCACGTCAGCGTCGATGACAAGCCCATTCTGCGCGGCATTGATCTCACGATCCGGGCGGG
CGAAGTGCACGCCATCATGGGGCCGAACGGCTCGGGCAAGAGCACGCTGGCCCACGTGCTGGCCGGGCGCGACAACCATG
TGGTGACCGCCGGCGAGGTGCGCTACGAAGGCCGCAACCTGCTCGATCTGCCGCCTGAAGAGCGGGCGCGGGCGGGGATC
TTTCTGGCCTTCCAGTACCCGGTGGAAATCCCCGGCGTCGCCAACATCTATCTGCTGAAGGCGGCGCTCAATGCGCAGCG
CTTGCACCGCGGCGAGCCGGAGCTGGACGCGGTGGACTTCCTCGCGCTGGTGAAGGGCAAGCTGGCGCTGATGGGCATGG
ACACCAGCCTGCTCTACCGCGCGGTCAACGAGGGTTTCTCCGGCGGCGAGAAGAAGCGCAACGAGATCCTGCAGATGGCC
GTGCTAGAGCCGAAACTCGCCATCCTGGATGAGACCGATTCGGGCCTGGACATCGATGCGCTCCAGGTCGTCGCCGGCGG
CATCAGCGCCATGCGCAGCCCGGAACGGGCCATCGTGCTGGTGACCCACTACCAGCGCCTGCTCAACTACATCGTGCCGG
ACCACGTGCACGTGCTGGCGCAAGGCCGCATCGCGCTGTCCGGCGGGAGAGAGCTGGCGCTGGAGCTGGAAAAACACGGT
TACGGCTGGATCGAGGCCGAGACCAGCCGTCAGGCGGGGGTGGTCTTATGA

Upstream 100 bases:

>100_bases
CAAGGAAGTGTTCAAGGAGCTGCCGATGGAATTCGCGGTGGAGGCGCAAAAGCTGCTGGGCGTGAGCCTGGAAGGCAGCA
TCGGATGACAAGGACAGACC

Downstream 100 bases:

>100_bases
ACGTCACCGCCACCGATTTCTACCGCGACGAATTTGCCCGCCTCAAGGCGTCACTGCCCGGCGGGCACCTGCCGTGGCTG
CGCCGCGCGCGCGAAGCAGG

Product: FeS assembly ATPase SufC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MLEIRNLHVSVDDKPILRGIDLTIRAGEVHAIMGPNGSGKSTLAHVLAGRDNHVVTAGEVRYEGRNLLDLPPEERARAGI
FLAFQYPVEIPGVANIYLLKAALNAQRLHRGEPELDAVDFLALVKGKLALMGMDTSLLYRAVNEGFSGGEKKRNEILQMA
VLEPKLAILDETDSGLDIDALQVVAGGISAMRSPERAIVLVTHYQRLLNYIVPDHVHVLAQGRIALSGGRELALELEKHG
YGWIEAETSRQAGVVL

Sequences:

>Translated_256_residues
MLEIRNLHVSVDDKPILRGIDLTIRAGEVHAIMGPNGSGKSTLAHVLAGRDNHVVTAGEVRYEGRNLLDLPPEERARAGI
FLAFQYPVEIPGVANIYLLKAALNAQRLHRGEPELDAVDFLALVKGKLALMGMDTSLLYRAVNEGFSGGEKKRNEILQMA
VLEPKLAILDETDSGLDIDALQVVAGGISAMRSPERAIVLVTHYQRLLNYIVPDHVHVLAQGRIALSGGRELALELEKHG
YGWIEAETSRQAGVVL
>Mature_256_residues
MLEIRNLHVSVDDKPILRGIDLTIRAGEVHAIMGPNGSGKSTLAHVLAGRDNHVVTAGEVRYEGRNLLDLPPEERARAGI
FLAFQYPVEIPGVANIYLLKAALNAQRLHRGEPELDAVDFLALVKGKLALMGMDTSLLYRAVNEGFSGGEKKRNEILQMA
VLEPKLAILDETDSGLDIDALQVVAGGISAMRSPERAIVLVTHYQRLLNYIVPDHVHVLAQGRIALSGGRELALELEKHG
YGWIEAETSRQAGVVL

Specific function: Has low ATPase activity. The SufBCD complex acts synergistically with SufE to stimulate the cysteine desulfurase activity of SufS. The SufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May f

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787972, Length=244, Percent_Identity=62.2950819672131, Blast_Score=318, Evalue=3e-88,
Organism=Escherichia coli, GI1788225, Length=233, Percent_Identity=27.8969957081545, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1787792, Length=233, Percent_Identity=27.8969957081545, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787500, Length=163, Percent_Identity=33.1288343558282, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1786698, Length=211, Percent_Identity=27.9620853080569, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI87081791, Length=177, Percent_Identity=30.5084745762712, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1787370, Length=229, Percent_Identity=24.4541484716157, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788506, Length=171, Percent_Identity=31.5789473684211, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1789891, Length=225, Percent_Identity=29.3333333333333, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=236, Percent_Identity=30.9322033898305, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71996809, Length=232, Percent_Identity=29.7413793103448, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI25146777, Length=252, Percent_Identity=26.1904761904762, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI193209708, Length=233, Percent_Identity=29.1845493562232, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17541710, Length=248, Percent_Identity=25.4032258064516, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI193202349, Length=224, Percent_Identity=29.0178571428571, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI19920532, Length=222, Percent_Identity=30.6306306306306, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24580930, Length=222, Percent_Identity=30.6306306306306, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI161076682, Length=234, Percent_Identity=29.0598290598291, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI161076684, Length=234, Percent_Identity=29.0598290598291, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24581617, Length=234, Percent_Identity=29.0598290598291, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24581615, Length=234, Percent_Identity=29.0598290598291, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27885; Mature: 27885

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEIRNLHVSVDDKPILRGIDLTIRAGEVHAIMGPNGSGKSTLAHVLAGRDNHVVTAGEV
CCEEEEEEEEECCCCEEECEEEEEECCEEEEEECCCCCCHHHHHHHHCCCCCCEEEECEE
RYEGRNLLDLPPEERARAGIFLAFQYPVEIPGVANIYLLKAALNAQRLHRGEPELDAVDF
EECCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCEEEEEEEHHCHHHHHCCCCCHHHHHH
LALVKGKLALMGMDTSLLYRAVNEGFSGGEKKRNEILQMAVLEPKLAILDETDSGLDIDA
HHHHHCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHH
LQVVAGGISAMRSPERAIVLVTHYQRLLNYIVPDHVHVLAQGRIALSGGRELALELEKHG
HHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCEEEEECCEEEECCCCEEEEEEECCC
YGWIEAETSRQAGVVL
CEEEEECCCCCCCCCC
>Mature Secondary Structure
MLEIRNLHVSVDDKPILRGIDLTIRAGEVHAIMGPNGSGKSTLAHVLAGRDNHVVTAGEV
CCEEEEEEEEECCCCEEECEEEEEECCEEEEEECCCCCCHHHHHHHHCCCCCCEEEECEE
RYEGRNLLDLPPEERARAGIFLAFQYPVEIPGVANIYLLKAALNAQRLHRGEPELDAVDF
EECCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCEEEEEEEHHCHHHHHCCCCCHHHHHH
LALVKGKLALMGMDTSLLYRAVNEGFSGGEKKRNEILQMAVLEPKLAILDETDSGLDIDA
HHHHHCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHH
LQVVAGGISAMRSPERAIVLVTHYQRLLNYIVPDHVHVLAQGRIALSGGRELALELEKHG
HHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCEEEEECCEEEECCCCEEEEEEECCC
YGWIEAETSRQAGVVL
CEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 10322040 [H]