Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790085

Identifier: 91790085

GI number: 91790085

Start: 4473043

End: 4474317

Strand: Direct

Name: 91790085

Synonym: Bpro_4247

Alternate gene names: NA

Gene position: 4473043-4474317 (Clockwise)

Preceding gene: 91790084

Following gene: 91790089

Centisome position: 86.02

GC content: 66.12

Gene sequence:

>1275_bases
ATGGGTCACCTACGCCTGAGTCTGCACAACCGTCGGCATCAGCGGCGGGCAAGCGGTGTTTTCCCGATCTTGCCGAATCT
GCCGCCAGCCCGGATACTCTGCGCCAGCATGCGCGCCGACCCTCATCTGTCACCCCATCCCGAACCCTTGCCCGGCGGTA
TCCGCCTCCACACCGACACCGAAGCGGCGCTGACAGCAGCCAGCCGCGTCGTGCAGCAGCAGCTCGTGCAGCTTGGCCTG
CAAGGCTATGTCGACCAGGCGCCGGCGCGCCCCTTGCCGGACGGCAAGGGCATTGAACAGAGCTTTCATCTGCGGTCCGA
GCTGGCCGACCGCTGGGCGCCGGGCCTGGACACGACCGGCCTGAACCAGCACCTGCAACGCGATACCGGGCAGCGCGACG
ACGATCTGGACCGGGAGATCCTGCTGGCCATGCTGCTGAGCCCGGTGGGATTTTCGTTTCCCAGCCATGCCGAGCTGGCA
TCGGCGGTGCGCATTCGCCGCAACATCGTGCTGGCCGCGCGCAAGACGGCGCTGGCGTTTCACACCACCGAGGCCGAGCG
GCCGCACGACTGCTGGACCTACGCCGAGGGTCGGGGCTTCACCGTGCGGCCGGGCCACGCACTGATTCCGGCGCTGCAAA
AGGCCACGCAACCGGACACCTCGGGCAAGCTGTACTCCTTTTCGTGCTACCGGGCCACCGAATACGTGATCCTGCTGGCG
ATTGCGCAGGAGCTCGAGCACAGCAACCCGGCCCTGCTGCACCGCCTGCAGCAGCAGTGGGAGCGCCGCGCCATCATGTC
GGGCCAGTTCCATGACGTGTTCCTGCGCGAATACGGCTCCATGGAGGCGCCGCTGCCGCCCCGGTATTACGTGCCGGGCG
ACCGCCTGTGGTTTCGCAACCCGGACCCACACTCATCCGATGTGACGGGCTATGAAGGCTCCTGGGTGTTTTATCTGGGC
GGCGGGCTGTTTACCAATTTCTGGAAACGGGAGCAGCCCTACACCTTGACGGCCAAATGCCTGGAGCTGTTCCATTGGCG
CCATGCCACCTACACGGATGCAGCCGGCGAGTTGAAAATCGACGAAAGCATTGTCGAAGCCCGTGTGCAAGACTCGCTGG
CCGACGCGGCCCAGGCGGCGCACATCCTGGAGTTGATGCTGCGCCTGCGGGAGCCCAAGGGGGTGTACCAGTCGGGCGGC
TGCATTGACACTTCGCGCGAGTACCCGCGCTGGGTCTGTCCGGGAACGACCGACCTGGTATTGCCGCCCGCCTGA

Upstream 100 bases:

>100_bases
TCCGCAACTGCTCGGTCACCGAGTTCGCCTTCACGCCCAAGCGTCACATGCTGGTGACCTACAACACGCTGCCACACCTG
GACGGGCCCGAGTACGCGGA

Downstream 100 bases:

>100_bases
ACGGTGGCATCGGTCAACCAGGTCAGCGCGGCAACAGCGGCAGGTCGGCCTTTTTCAGGGTGCGCAGCACAAAACTGGAC
TTGCTGTGGCGTATGCCCTT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MGHLRLSLHNRRHQRRASGVFPILPNLPPARILCASMRADPHLSPHPEPLPGGIRLHTDTEAALTAASRVVQQQLVQLGL
QGYVDQAPARPLPDGKGIEQSFHLRSELADRWAPGLDTTGLNQHLQRDTGQRDDDLDREILLAMLLSPVGFSFPSHAELA
SAVRIRRNIVLAARKTALAFHTTEAERPHDCWTYAEGRGFTVRPGHALIPALQKATQPDTSGKLYSFSCYRATEYVILLA
IAQELEHSNPALLHRLQQQWERRAIMSGQFHDVFLREYGSMEAPLPPRYYVPGDRLWFRNPDPHSSDVTGYEGSWVFYLG
GGLFTNFWKREQPYTLTAKCLELFHWRHATYTDAAGELKIDESIVEARVQDSLADAAQAAHILELMLRLREPKGVYQSGG
CIDTSREYPRWVCPGTTDLVLPPA

Sequences:

>Translated_424_residues
MGHLRLSLHNRRHQRRASGVFPILPNLPPARILCASMRADPHLSPHPEPLPGGIRLHTDTEAALTAASRVVQQQLVQLGL
QGYVDQAPARPLPDGKGIEQSFHLRSELADRWAPGLDTTGLNQHLQRDTGQRDDDLDREILLAMLLSPVGFSFPSHAELA
SAVRIRRNIVLAARKTALAFHTTEAERPHDCWTYAEGRGFTVRPGHALIPALQKATQPDTSGKLYSFSCYRATEYVILLA
IAQELEHSNPALLHRLQQQWERRAIMSGQFHDVFLREYGSMEAPLPPRYYVPGDRLWFRNPDPHSSDVTGYEGSWVFYLG
GGLFTNFWKREQPYTLTAKCLELFHWRHATYTDAAGELKIDESIVEARVQDSLADAAQAAHILELMLRLREPKGVYQSGG
CIDTSREYPRWVCPGTTDLVLPPA
>Mature_423_residues
GHLRLSLHNRRHQRRASGVFPILPNLPPARILCASMRADPHLSPHPEPLPGGIRLHTDTEAALTAASRVVQQQLVQLGLQ
GYVDQAPARPLPDGKGIEQSFHLRSELADRWAPGLDTTGLNQHLQRDTGQRDDDLDREILLAMLLSPVGFSFPSHAELAS
AVRIRRNIVLAARKTALAFHTTEAERPHDCWTYAEGRGFTVRPGHALIPALQKATQPDTSGKLYSFSCYRATEYVILLAI
AQELEHSNPALLHRLQQQWERRAIMSGQFHDVFLREYGSMEAPLPPRYYVPGDRLWFRNPDPHSSDVTGYEGSWVFYLGG
GLFTNFWKREQPYTLTAKCLELFHWRHATYTDAAGELKIDESIVEARVQDSLADAAQAAHILELMLRLREPKGVYQSGGC
IDTSREYPRWVCPGTTDLVLPPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47661; Mature: 47529

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHLRLSLHNRRHQRRASGVFPILPNLPPARILCASMRADPHLSPHPEPLPGGIRLHTDT
CCCEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCC
EAALTAASRVVQQQLVQLGLQGYVDQAPARPLPDGKGIEQSFHLRSELADRWAPGLDTTG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
LNQHLQRDTGQRDDDLDREILLAMLLSPVGFSFPSHAELASAVRIRRNIVLAARKTALAF
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEHHHEEEE
HTTEAERPHDCWTYAEGRGFTVRPGHALIPALQKATQPDTSGKLYSFSCYRATEYVILLA
ECCCCCCCCCCCEEECCCCCEECCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHH
IAQELEHSNPALLHRLQQQWERRAIMSGQFHDVFLREYGSMEAPLPPRYYVPGDRLWFRN
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEECCCCEEEECC
PDPHSSDVTGYEGSWVFYLGGGLFTNFWKREQPYTLTAKCLELFHWRHATYTDAAGELKI
CCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEH
DESIVEARVQDSLADAAQAAHILELMLRLREPKGVYQSGGCIDTSREYPRWVCPGTTDLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCEE
LPPA
CCCC
>Mature Secondary Structure 
GHLRLSLHNRRHQRRASGVFPILPNLPPARILCASMRADPHLSPHPEPLPGGIRLHTDT
CCEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCC
EAALTAASRVVQQQLVQLGLQGYVDQAPARPLPDGKGIEQSFHLRSELADRWAPGLDTTG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
LNQHLQRDTGQRDDDLDREILLAMLLSPVGFSFPSHAELASAVRIRRNIVLAARKTALAF
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEHHHEEEE
HTTEAERPHDCWTYAEGRGFTVRPGHALIPALQKATQPDTSGKLYSFSCYRATEYVILLA
ECCCCCCCCCCCEEECCCCCEECCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHH
IAQELEHSNPALLHRLQQQWERRAIMSGQFHDVFLREYGSMEAPLPPRYYVPGDRLWFRN
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEECCCCEEEECC
PDPHSSDVTGYEGSWVFYLGGGLFTNFWKREQPYTLTAKCLELFHWRHATYTDAAGELKI
CCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEH
DESIVEARVQDSLADAAQAAHILELMLRLREPKGVYQSGGCIDTSREYPRWVCPGTTDLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCEE
LPPA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA