| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is iorB [H]
Identifier: 91790065
GI number: 91790065
Start: 4454058
End: 4456376
Strand: Reverse
Name: iorB [H]
Synonym: Bpro_4227
Alternate gene names: 91790065
Gene position: 4456376-4454058 (Counterclockwise)
Preceding gene: 91790066
Following gene: 91790061
Centisome position: 85.7
GC content: 66.54
Gene sequence:
>2319_bases ATGAAAAGACGCGCCTGGCTGCTGAGTGCGGCAGGGGCTGCGGGCGCGCTGGTCATCGGCTGGAGCGTGTTGCCACCGCG TTCCCGGCTGGGCAGCGCCGGCTCGCACTCGCCGGCGGCTCTGCGGGCCGGGCGGGAGGAATCCACCGGGGTGGCGCTGA ATGGCTGGATCAAGATATTGGACGACGGGTCGGTGGTGTTGGCCATGCCGCGCAGTGAGATGGGGCAGGGCGTGCATACC GCGCTCGCGATGCTGGTAGCTGAAGAGCTGGACGTGCCCTTGGCCCGGGTGAGCCTGGAGCAGGCGGGCAGCGACACCAT TTACGGCAATGTGGCCATGCTGGTCGCAAGTTTGCCCTTTCACCCGATGGAGCGGGACGCCTACTCTGAGGAGGGGGTAC CCCAGGTGCCGCCGGTGAAAATCAGGGTCAGTGAATGGCTGGTGGGCAAGTTGGCCCGGGAGCTGGGCATCAATGCGACC GGCGCGTCGTCCAGCGTGGCCGATGCCTGGGAGGTCCTGCGAATGGCCGCGGCGACGGCGAGGGCCAGCCTGCTGGGGGC CGCTTCGCTGGACTGGAAGCTGCCGGTGGACGAGCTCAGCGTCAGCAACGGCGTCATCTCCCATCCGTCGGGCCCTTCGG CGCACTATGGTGAGTTGGCCAGGTTTGCCGCCGCCACCCCGCCGGGTGAGGTCACGCTCAAGGACCGCAAAGACTGGAAA CTGATAGGCCAGAGTGCCCCGCGCCAGGACGTGCCGGCAAAGGTCAACGGCAGCGCCCTGTTCGGGCTGGACGTGCGCCT GCCCGGCATGGTGTTTGCCTCAGTCCGCCTGTGCCCCATGCTCGGAGGCTCGCCTGGCGCCATCAACCCCCATGCCGCGC TGGGCCTTCCCGGTGTGGAACGCCTGGTGCGCCTGCCCGCCTACGCCGGCTCCACCGCCGGGTTTGCCGTGGTGGGTAAA ACCTGGTGGCATGCCCAGCAGGGCGCGCTGGCCGTGCAGGTCGACTGGCAGCAGCGCCCCGCCGGCGCGCTGGACAGCCG GCTGATCGAAAAAGAGCTGGAAACCGTCCTGACGCGCACGGATGGCTTTACCTTTTATGAAACAGGCGCCGTGGAAACTG CCGAAGCGGGCGCTGTACGCAAGATCGACGCGCTGTACCGTGCGCCGTACCTGGCGCATGCGACCCTGGAGCCCATGAAC TGCACGGCGCAAGTGGTGGATGGCAAGGTGCTGCTGTGGGCACCCACACAGGTGCCGCAGATGGCTGTGGCGGCGGCGGC GCGGGTGGCGGGGGTGGCGGTGAAGGATGTCAAACTGACCGTCACCTTGCTGGGCGGCGGCTTTGGGCGGCGGCTGGAGG TGGACTTTGTAGCCCAGGCCGTGCGCGTGGCCATGGAATGCGGCGGCCGGCCGGTGCAGCTGATCTGGTCCCGCGAGGAA GACACCACCCATGACTTCTATCGGCCCATGCATGTCGCCATGCTGCGTGCCGCTGTCAATGCAGAAGGCCAGGTGACCAG CCTGCGCATTAAATCGGCGGGGGACGCCATCACGCCGCGCTGGATGGCCCGTGGCCTGCCCGCGTTGTCCGGGCCGGTAG ATACCCCTGACAAAACCACCGCGGAAGGCCTGTTTGACCTGCCTTACGGCTTCGCCAGCCAAAAAATGTCCCATGTGGCC ACCCGTATGGGCGTGCCGGTGGGCTTTTGGCGCTCGGTAGGGCATTCGCACAATGCCTTTTTTTCGGAAAGCTTTATCGA TGAGCTGGCTTGGGATGCCAAACAGGACCCCCTGGCTTTCCGGCGTGCCTTGTTAAGCCATGCGCCCCGGCATCTTGCGG TGCTGGATATGGCTGCCGGCAAGGCTGGTTGGAGCGATGCGCTGCCCGCGGGCCGTGCGCGGGGTCTCGCCTTGCACGAA TCGTTCGGCTCCATCGTGGCGCAGGTGGTGGAGGTGTCGCTGGTGGGTGGTACGCCACGCGTGCACCGCGTGGTGTGTGC GATAGATTGCGGCACTGTGATCAATCCGGGTATCGTGGCGCAGCAAATGGAAGGCGCCGTTGTCTTCGCGCTGACTGCTG CGCTGTACGGGCGGGTCGATATTCATGAAGGCGTGGTGCAGCAGAAGAACTTTCACGACTACCCGATGCTGCAGCTGGCG CAGGCGCCATTGGTCCAGACCTATATGGTGTCCAGCACGCGTCCACCGGCCGGCGTGGGCGAGCCTGGTGTACCGCCCCT GGCGCCCGCCTTGGCCGGCGCGCTGTTCACCCTGACCGGCAAACGTATGCGTTCCTTGCCCCTGTCCCTCCAGTTGTAG
Upstream 100 bases:
>100_bases TGACCAATATCTGCCGCTGCGGTACGTACCAGAGGATCCGGGCGGCCATCAAGCGGGCGGCGGGCATCGCGGCCAATGGT GGCTTGAAAAAGGCCGGCCC
Downstream 100 bases:
>100_bases CCGGTTGTCCGGGATGAATGGGTGCCGGCCTGCGGTAATGGGTCGACCGCCCACCTCAAACGCGTTTCGATTTCTTCTTC AGGGCCTGAAAAATAGTGTT
Product: putative transmembrane isoquinoline 1-oxidoreductase (beta subunit) oxidoreductase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 772; Mature: 772
Protein sequence:
>772_residues MKRRAWLLSAAGAAGALVIGWSVLPPRSRLGSAGSHSPAALRAGREESTGVALNGWIKILDDGSVVLAMPRSEMGQGVHT ALAMLVAEELDVPLARVSLEQAGSDTIYGNVAMLVASLPFHPMERDAYSEEGVPQVPPVKIRVSEWLVGKLARELGINAT GASSSVADAWEVLRMAAATARASLLGAASLDWKLPVDELSVSNGVISHPSGPSAHYGELARFAAATPPGEVTLKDRKDWK LIGQSAPRQDVPAKVNGSALFGLDVRLPGMVFASVRLCPMLGGSPGAINPHAALGLPGVERLVRLPAYAGSTAGFAVVGK TWWHAQQGALAVQVDWQQRPAGALDSRLIEKELETVLTRTDGFTFYETGAVETAEAGAVRKIDALYRAPYLAHATLEPMN CTAQVVDGKVLLWAPTQVPQMAVAAAARVAGVAVKDVKLTVTLLGGGFGRRLEVDFVAQAVRVAMECGGRPVQLIWSREE DTTHDFYRPMHVAMLRAAVNAEGQVTSLRIKSAGDAITPRWMARGLPALSGPVDTPDKTTAEGLFDLPYGFASQKMSHVA TRMGVPVGFWRSVGHSHNAFFSESFIDELAWDAKQDPLAFRRALLSHAPRHLAVLDMAAGKAGWSDALPAGRARGLALHE SFGSIVAQVVEVSLVGGTPRVHRVVCAIDCGTVINPGIVAQQMEGAVVFALTAALYGRVDIHEGVVQQKNFHDYPMLQLA QAPLVQTYMVSSTRPPAGVGEPGVPPLAPALAGALFTLTGKRMRSLPLSLQL
Sequences:
>Translated_772_residues MKRRAWLLSAAGAAGALVIGWSVLPPRSRLGSAGSHSPAALRAGREESTGVALNGWIKILDDGSVVLAMPRSEMGQGVHT ALAMLVAEELDVPLARVSLEQAGSDTIYGNVAMLVASLPFHPMERDAYSEEGVPQVPPVKIRVSEWLVGKLARELGINAT GASSSVADAWEVLRMAAATARASLLGAASLDWKLPVDELSVSNGVISHPSGPSAHYGELARFAAATPPGEVTLKDRKDWK LIGQSAPRQDVPAKVNGSALFGLDVRLPGMVFASVRLCPMLGGSPGAINPHAALGLPGVERLVRLPAYAGSTAGFAVVGK TWWHAQQGALAVQVDWQQRPAGALDSRLIEKELETVLTRTDGFTFYETGAVETAEAGAVRKIDALYRAPYLAHATLEPMN CTAQVVDGKVLLWAPTQVPQMAVAAAARVAGVAVKDVKLTVTLLGGGFGRRLEVDFVAQAVRVAMECGGRPVQLIWSREE DTTHDFYRPMHVAMLRAAVNAEGQVTSLRIKSAGDAITPRWMARGLPALSGPVDTPDKTTAEGLFDLPYGFASQKMSHVA TRMGVPVGFWRSVGHSHNAFFSESFIDELAWDAKQDPLAFRRALLSHAPRHLAVLDMAAGKAGWSDALPAGRARGLALHE SFGSIVAQVVEVSLVGGTPRVHRVVCAIDCGTVINPGIVAQQMEGAVVFALTAALYGRVDIHEGVVQQKNFHDYPMLQLA QAPLVQTYMVSSTRPPAGVGEPGVPPLAPALAGALFTLTGKRMRSLPLSLQL >Mature_772_residues MKRRAWLLSAAGAAGALVIGWSVLPPRSRLGSAGSHSPAALRAGREESTGVALNGWIKILDDGSVVLAMPRSEMGQGVHT ALAMLVAEELDVPLARVSLEQAGSDTIYGNVAMLVASLPFHPMERDAYSEEGVPQVPPVKIRVSEWLVGKLARELGINAT GASSSVADAWEVLRMAAATARASLLGAASLDWKLPVDELSVSNGVISHPSGPSAHYGELARFAAATPPGEVTLKDRKDWK LIGQSAPRQDVPAKVNGSALFGLDVRLPGMVFASVRLCPMLGGSPGAINPHAALGLPGVERLVRLPAYAGSTAGFAVVGK TWWHAQQGALAVQVDWQQRPAGALDSRLIEKELETVLTRTDGFTFYETGAVETAEAGAVRKIDALYRAPYLAHATLEPMN CTAQVVDGKVLLWAPTQVPQMAVAAAARVAGVAVKDVKLTVTLLGGGFGRRLEVDFVAQAVRVAMECGGRPVQLIWSREE DTTHDFYRPMHVAMLRAAVNAEGQVTSLRIKSAGDAITPRWMARGLPALSGPVDTPDKTTAEGLFDLPYGFASQKMSHVA TRMGVPVGFWRSVGHSHNAFFSESFIDELAWDAKQDPLAFRRALLSHAPRHLAVLDMAAGKAGWSDALPAGRARGLALHE SFGSIVAQVVEVSLVGGTPRVHRVVCAIDCGTVINPGIVAQQMEGAVVFALTAALYGRVDIHEGVVQQKNFHDYPMLQLA QAPLVQTYMVSSTRPPAGVGEPGVPPLAPALAGALFTLTGKRMRSLPLSLQL
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 81736; Mature: 81736
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRAWLLSAAGAAGALVIGWSVLPPRSRLGSAGSHSPAALRAGREESTGVALNGWIKIL CCCCEEEEECCCCCCEEEEEEECCCCHHHCCCCCCCCCHHHHCCCCCCCCEEEEEEEEEE DDGSVVLAMPRSEMGQGVHTALAMLVAEELDVPLARVSLEQAGSDTIYGNVAMLVASLPF ECCCEEEEECHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCC HPMERDAYSEEGVPQVPPVKIRVSEWLVGKLARELGINATGASSSVADAWEVLRMAAATA CCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH RASLLGAASLDWKLPVDELSVSNGVISHPSGPSAHYGELARFAAATPPGEVTLKDRKDWK HHHHHCCCCCCCCCCHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCC LIGQSAPRQDVPAKVNGSALFGLDVRLPGMVFASVRLCPMLGGSPGAINPHAALGLPGVE EECCCCCCCCCCCEECCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHH RLVRLPAYAGSTAGFAVVGKTWWHAQQGALAVQVDWQQRPAGALDSRLIEKELETVLTRT HHHHCCCCCCCCCCEEEEECHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHC DGFTFYETGAVETAEAGAVRKIDALYRAPYLAHATLEPMNCTAQVVDGKVLLWAPTQVPQ CCCEEEECCCCCCCCCCCHHHHHHHHHCCCCEECCCCCCCCEEEEECCEEEEECCCCCHH MAVAAAARVAGVAVKDVKLTVTLLGGGFGRRLEVDFVAQAVRVAMECGGRPVQLIWSREE HHHHHHHHHHCEEEEEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHCCCCEEEEEEECCC DTTHDFYRPMHVAMLRAAVNAEGQVTSLRIKSAGDAITPRWMARGLPALSGPVDTPDKTT CCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCC AEGLFDLPYGFASQKMSHVATRMGVPVGFWRSVGHSHNAFFSESFIDELAWDAKQDPLAF CCCHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHH RRALLSHAPRHLAVLDMAAGKAGWSDALPAGRARGLALHESFGSIVAQVVEVSLVGGTPR HHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHEEECCCCC VHRVVCAIDCGTVINPGIVAQQMEGAVVFALTAALYGRVDIHEGVVQQKNFHDYPMLQLA CEEEEEEEECCCCCCCCHHHHHHCCEEHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHH QAPLVQTYMVSSTRPPAGVGEPGVPPLAPALAGALFTLTGKRMRSLPLSLQL HCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCEECC >Mature Secondary Structure MKRRAWLLSAAGAAGALVIGWSVLPPRSRLGSAGSHSPAALRAGREESTGVALNGWIKIL CCCCEEEEECCCCCCEEEEEEECCCCHHHCCCCCCCCCHHHHCCCCCCCCEEEEEEEEEE DDGSVVLAMPRSEMGQGVHTALAMLVAEELDVPLARVSLEQAGSDTIYGNVAMLVASLPF ECCCEEEEECHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCC HPMERDAYSEEGVPQVPPVKIRVSEWLVGKLARELGINATGASSSVADAWEVLRMAAATA CCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH RASLLGAASLDWKLPVDELSVSNGVISHPSGPSAHYGELARFAAATPPGEVTLKDRKDWK HHHHHCCCCCCCCCCHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCC LIGQSAPRQDVPAKVNGSALFGLDVRLPGMVFASVRLCPMLGGSPGAINPHAALGLPGVE EECCCCCCCCCCCEECCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHH RLVRLPAYAGSTAGFAVVGKTWWHAQQGALAVQVDWQQRPAGALDSRLIEKELETVLTRT HHHHCCCCCCCCCCEEEEECHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHC DGFTFYETGAVETAEAGAVRKIDALYRAPYLAHATLEPMNCTAQVVDGKVLLWAPTQVPQ CCCEEEECCCCCCCCCCCHHHHHHHHHCCCCEECCCCCCCCEEEEECCEEEEECCCCCHH MAVAAAARVAGVAVKDVKLTVTLLGGGFGRRLEVDFVAQAVRVAMECGGRPVQLIWSREE HHHHHHHHHHCEEEEEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHCCCCEEEEEEECCC DTTHDFYRPMHVAMLRAAVNAEGQVTSLRIKSAGDAITPRWMARGLPALSGPVDTPDKTT CCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCC AEGLFDLPYGFASQKMSHVATRMGVPVGFWRSVGHSHNAFFSESFIDELAWDAKQDPLAF CCCHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHH RRALLSHAPRHLAVLDMAAGKAGWSDALPAGRARGLALHESFGSIVAQVVEVSLVGGTPR HHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHEEECCCCC VHRVVCAIDCGTVINPGIVAQQMEGAVVFALTAALYGRVDIHEGVVQQKNFHDYPMLQLA CEEEEEEEECCCCCCCCHHHHHHCCEEHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHH QAPLVQTYMVSSTRPPAGVGEPGVPPLAPALAGALFTLTGKRMRSLPLSLQL HCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]