| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is aceK
Identifier: 91790026
GI number: 91790026
Start: 4400775
End: 4402652
Strand: Reverse
Name: aceK
Synonym: Bpro_4188
Alternate gene names: 91790026
Gene position: 4402652-4400775 (Counterclockwise)
Preceding gene: 91790027
Following gene: 91790025
Centisome position: 84.66
GC content: 59.27
Gene sequence:
>1878_bases GTGTTTCCCCAGCGCCTTGACTCCACCATCGCCTACGACATTGCGAAAGCGATGATGGACGGGTTCAACCGCCACTACCA GCTGTTTCGCACCGAGTCGGCGCGTGCCAAGCACCGTTTCGAAACCGCCGACTGGCATGGCCAGCAACGCGCCCAGCGCG AGCGTATCGAGTTTTACGACCTGCGCGTGCGCGAAGCGTCGACGCGGCTGGAGCGTGAGTTCAAGGCCGGCGAGCAGTCC ATGGATGTCTGGCACCAGGTCAAGCTGCATTACATCGGCCTGCTGGTCAATCACCACCAGCCCGAACTGGCTGAGACCTT CTTCAATTCGGTCACCACCAAAATACTGCACCGCAGCTATTTCCAGAACGACTTCATCTTCGTCCGGCCAGCCGTCAGCA CCGAGTACATTGAAAACGAGGAGCCGACGGCGCAACCCACCTACCGTGCGTATTACCCGACCCGCGACAACCTGCGCGAG ATCATCGTCCGGCTGGTGCGCGACTTCGACCTGCGCCTGGAGTTTGAAGACCTGGAGCGCGATGCCGGCTATGTGCTGGA GGCCGTCAGCGAGCGGCTCAGCGACGTGAAACTGCGCGCCAATTTCCAGATACAGGTGTTGTCGGGCCTGTTTTTCCGCA ACAAGGGCGCTTACGTCGTCGGCAAGATCATCAACGGCTTTAATGAAGTGCCGCTTGCCCTGCCGATATTGCACAGCAAG AGCGGCAAGCTGGTGATAGACGCCGCACTGTTTGGCGAGGATGACCTGCTCATCCTGTTCAGTTTTGCGCGTGCCTACTT CATGGTGGACATGGGCATCCCGTCGGCCTATGTGCAGTTTCTGCGCAGCATGATGCCGCACATGCCGCGCGCGGAAATCT ACAACGCGCTCGGCCTGGCCAAGCAGGGCAAGACGCTGTTCTACCGAGACTTCCTTCACCACCTGCGGCACTCGACCGAC AAGTTCCGCATTGCGCCCGGCATCAAGGGCATGGTGATGCTGGTGTTCGACCTGCCCTCGTTTCCTTATGTCTTCAAGGT CATCAAGGACTACTATCCGCCGCAAAAAGACACCAGCCGCGAGCAGATCAAGGGCAAGTACCTGCTCGTCAAGCAGCATG ACCGCGTGGGCCGCATGGCTGATACCCAGGAGTACAGTGAAGTTGCCTTTCCGCGCGCCCGGTTTGATGATGAGCTGATT GCTGAAATTGAAAAGTTTGCACCCAGCCAGCTCGAAATCAGCGACCGCGACCGCGACGGCAACACGGAGGTGATCATCAA GCACGTCTACATCGAGCGGCGCATGATTCCGCTGAACATTTACCTGCAGGAAGCGTTTGACGCCGGCGTCGGCGAGCCCG CTGCAAAAAACCAGATCGAACGTGCCGTTGTCGAATACGGCAACGCCATCAAGGACCTGGTGGCAGCCAATATCTTTCCG GGTGACATGCTGTGGAAGAACTTCGGCATCACCCGCCACGGCAAGGTCGTGTTCTATGACTACGACGAGATTGAATACAT CACCGACTGCAAATTCCGCCGGGTGCCGGCGCCGCGCAATGATGAAGAGGAAATGAGCGGCGAGGTCTGGTATTCCGTGG GGCCCAAAGACGTCTTTCCCGAAACCTTCGCCCCCTTCCTGCTCGGCAATGACGCGGTGCGCGAGGTTTTCATGAAGCAC CACGGCGACTTGCTGGATGCCGAGTTCTGGCAAAGCCACCAGGCCCGCATTCAGGCCGGCCATGTGCACGACGTCTTCCC CTATGAGCGGGAAAAGCGCTTCACCCGGCGCCATTCCCCCGGCCGGAATGACCACGAATTGTTGACCCACCTTCCGCCCG AGCCGATGCTGACCGGCCTCAGTGGCATGACCCCCTAA
Upstream 100 bases:
>100_bases CTGGATGCCCGCTACCGGCAGGCGGTGGACCGCGTCTGGGACCTCTGGAACAGCCGGTAACGTCAGATAACGCCAGACAG CGCCAGAACCAGGACTCGCC
Downstream 100 bases:
>100_bases GCGCGGCAAGAGCCTGGCAAGCGCGCAAAAAGCACGGCAAGAACAGCACCACAGTTTTCATTCAACCCTGAAAGGACACA CATCATGTCGGATTCCATCG
Product: bifunctional isocitrate dehydrogenase kinase/phosphatase protein
Products: NA
Alternate protein names: IDH kinase/phosphatase; IDHK/P
Number of amino acids: Translated: 625; Mature: 625
Protein sequence:
>625_residues MFPQRLDSTIAYDIAKAMMDGFNRHYQLFRTESARAKHRFETADWHGQQRAQRERIEFYDLRVREASTRLEREFKAGEQS MDVWHQVKLHYIGLLVNHHQPELAETFFNSVTTKILHRSYFQNDFIFVRPAVSTEYIENEEPTAQPTYRAYYPTRDNLRE IIVRLVRDFDLRLEFEDLERDAGYVLEAVSERLSDVKLRANFQIQVLSGLFFRNKGAYVVGKIINGFNEVPLALPILHSK SGKLVIDAALFGEDDLLILFSFARAYFMVDMGIPSAYVQFLRSMMPHMPRAEIYNALGLAKQGKTLFYRDFLHHLRHSTD KFRIAPGIKGMVMLVFDLPSFPYVFKVIKDYYPPQKDTSREQIKGKYLLVKQHDRVGRMADTQEYSEVAFPRARFDDELI AEIEKFAPSQLEISDRDRDGNTEVIIKHVYIERRMIPLNIYLQEAFDAGVGEPAAKNQIERAVVEYGNAIKDLVAANIFP GDMLWKNFGITRHGKVVFYDYDEIEYITDCKFRRVPAPRNDEEEMSGEVWYSVGPKDVFPETFAPFLLGNDAVREVFMKH HGDLLDAEFWQSHQARIQAGHVHDVFPYEREKRFTRRHSPGRNDHELLTHLPPEPMLTGLSGMTP
Sequences:
>Translated_625_residues MFPQRLDSTIAYDIAKAMMDGFNRHYQLFRTESARAKHRFETADWHGQQRAQRERIEFYDLRVREASTRLEREFKAGEQS MDVWHQVKLHYIGLLVNHHQPELAETFFNSVTTKILHRSYFQNDFIFVRPAVSTEYIENEEPTAQPTYRAYYPTRDNLRE IIVRLVRDFDLRLEFEDLERDAGYVLEAVSERLSDVKLRANFQIQVLSGLFFRNKGAYVVGKIINGFNEVPLALPILHSK SGKLVIDAALFGEDDLLILFSFARAYFMVDMGIPSAYVQFLRSMMPHMPRAEIYNALGLAKQGKTLFYRDFLHHLRHSTD KFRIAPGIKGMVMLVFDLPSFPYVFKVIKDYYPPQKDTSREQIKGKYLLVKQHDRVGRMADTQEYSEVAFPRARFDDELI AEIEKFAPSQLEISDRDRDGNTEVIIKHVYIERRMIPLNIYLQEAFDAGVGEPAAKNQIERAVVEYGNAIKDLVAANIFP GDMLWKNFGITRHGKVVFYDYDEIEYITDCKFRRVPAPRNDEEEMSGEVWYSVGPKDVFPETFAPFLLGNDAVREVFMKH HGDLLDAEFWQSHQARIQAGHVHDVFPYEREKRFTRRHSPGRNDHELLTHLPPEPMLTGLSGMTP >Mature_625_residues MFPQRLDSTIAYDIAKAMMDGFNRHYQLFRTESARAKHRFETADWHGQQRAQRERIEFYDLRVREASTRLEREFKAGEQS MDVWHQVKLHYIGLLVNHHQPELAETFFNSVTTKILHRSYFQNDFIFVRPAVSTEYIENEEPTAQPTYRAYYPTRDNLRE IIVRLVRDFDLRLEFEDLERDAGYVLEAVSERLSDVKLRANFQIQVLSGLFFRNKGAYVVGKIINGFNEVPLALPILHSK SGKLVIDAALFGEDDLLILFSFARAYFMVDMGIPSAYVQFLRSMMPHMPRAEIYNALGLAKQGKTLFYRDFLHHLRHSTD KFRIAPGIKGMVMLVFDLPSFPYVFKVIKDYYPPQKDTSREQIKGKYLLVKQHDRVGRMADTQEYSEVAFPRARFDDELI AEIEKFAPSQLEISDRDRDGNTEVIIKHVYIERRMIPLNIYLQEAFDAGVGEPAAKNQIERAVVEYGNAIKDLVAANIFP GDMLWKNFGITRHGKVVFYDYDEIEYITDCKFRRVPAPRNDEEEMSGEVWYSVGPKDVFPETFAPFLLGNDAVREVFMKH HGDLLDAEFWQSHQARIQAGHVHDVFPYEREKRFTRRHSPGRNDHELLTHLPPEPMLTGLSGMTP
Specific function: Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source
COG id: COG4579
COG function: function code T; Isocitrate dehydrogenase kinase/phosphatase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AceK family
Homologues:
Organism=Escherichia coli, GI1790446, Length=588, Percent_Identity=40.8163265306122, Blast_Score=441, Evalue=1e-125,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACEK_POLSJ (Q124G2)
Other databases:
- EMBL: CP000316 - RefSeq: YP_550978.1 - STRING: Q124G2 - GeneID: 4013128 - GenomeReviews: CP000316_GR - KEGG: pol:Bpro_4188 - NMPDR: fig|296591.1.peg.4260 - eggNOG: COG4579 - HOGENOM: HBG298593 - OMA: RMTPLNI - PhylomeDB: Q124G2 - ProtClustDB: PRK02946 - BioCyc: PSP296591:BPRO_4188-MONOMER - GO: GO:0005737 - HAMAP: MF_00747 - InterPro: IPR010452 - PIRSF: PIRSF000719 - ProDom: PD043552
Pfam domain/function: PF06315 AceK
EC number: =2.7.11.5
Molecular weight: Translated: 72903; Mature: 72903
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: ACT_SITE 381-381 BINDING 346-346
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPQRLDSTIAYDIAKAMMDGFNRHYQLFRTESARAKHRFETADWHGQQRAQRERIEFYD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHH LRVREASTRLEREFKAGEQSMDVWHQVKLHYIGLLVNHHQPELAETFFNSVTTKILHRSY HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHH FQNDFIFVRPAVSTEYIENEEPTAQPTYRAYYPTRDNLREIIVRLVRDFDLRLEFEDLER HCCCEEEEECCCCHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEHHHHCC DAGYVLEAVSERLSDVKLRANFQIQVLSGLFFRNKGAYVVGKIINGFNEVPLALPILHSK HHHHHHHHHHHHHHCEEEECCEEEEEEHHHHCCCCCCEEEEHHHCCCCCCCEEEEEEECC SGKLVIDAALFGEDDLLILFSFARAYFMVDMGIPSAYVQFLRSMMPHMPRAEIYNALGLA CCCEEEEEEEECCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHH KQGKTLFYRDFLHHLRHSTDKFRIAPGIKGMVMLVFDLPSFPYVFKVIKDYYPPQKDTSR HCCCCHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCH EQIKGKYLLVKQHDRVGRMADTQEYSEVAFPRARFDDELIAEIEKFAPSQLEISDRDRDG HHHCCCEEEEECCCCCCCCCCHHHHHHHCCCHHCCCHHHHHHHHHCCCCCEEECCCCCCC NTEVIIKHVYIERRMIPLNIYLQEAFDAGVGEPAAKNQIERAVVEYGNAIKDLVAANIFP CCEEEEEEEEECCEEEEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC GDMLWKNFGITRHGKVVFYDYDEIEYITDCKFRRVPAPRNDEEEMSGEVWYSVGPKDVFP CHHHHHHCCCCCCCEEEEEECCCHHHHHCCCEECCCCCCCCHHHCCCCEEEECCCHHCCC ETFAPFLLGNDAVREVFMKHHGDLLDAEFWQSHQARIQAGHVHDVFPYEREKRFTRRHSP HHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHCCC GRNDHELLTHLPPEPMLTGLSGMTP CCCCHHHHHCCCCCHHHHCCCCCCC >Mature Secondary Structure MFPQRLDSTIAYDIAKAMMDGFNRHYQLFRTESARAKHRFETADWHGQQRAQRERIEFYD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHH LRVREASTRLEREFKAGEQSMDVWHQVKLHYIGLLVNHHQPELAETFFNSVTTKILHRSY HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHH FQNDFIFVRPAVSTEYIENEEPTAQPTYRAYYPTRDNLREIIVRLVRDFDLRLEFEDLER HCCCEEEEECCCCHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEHHHHCC DAGYVLEAVSERLSDVKLRANFQIQVLSGLFFRNKGAYVVGKIINGFNEVPLALPILHSK HHHHHHHHHHHHHHCEEEECCEEEEEEHHHHCCCCCCEEEEHHHCCCCCCCEEEEEEECC SGKLVIDAALFGEDDLLILFSFARAYFMVDMGIPSAYVQFLRSMMPHMPRAEIYNALGLA CCCEEEEEEEECCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHH KQGKTLFYRDFLHHLRHSTDKFRIAPGIKGMVMLVFDLPSFPYVFKVIKDYYPPQKDTSR HCCCCHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCH EQIKGKYLLVKQHDRVGRMADTQEYSEVAFPRARFDDELIAEIEKFAPSQLEISDRDRDG HHHCCCEEEEECCCCCCCCCCHHHHHHHCCCHHCCCHHHHHHHHHCCCCCEEECCCCCCC NTEVIIKHVYIERRMIPLNIYLQEAFDAGVGEPAAKNQIERAVVEYGNAIKDLVAANIFP CCEEEEEEEEECCEEEEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC GDMLWKNFGITRHGKVVFYDYDEIEYITDCKFRRVPAPRNDEEEMSGEVWYSVGPKDVFP CHHHHHHCCCCCCCEEEEEECCCHHHHHCCCEECCCCCCCCHHHCCCCEEEECCCHHCCC ETFAPFLLGNDAVREVFMKHHGDLLDAEFWQSHQARIQAGHVHDVFPYEREKRFTRRHSP HHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHCCC GRNDHELLTHLPPEPMLTGLSGMTP CCCCHHHHHCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA