| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790013
Identifier: 91790013
GI number: 91790013
Start: 4391292
End: 4391672
Strand: Reverse
Name: 91790013
Synonym: Bpro_4175
Alternate gene names: NA
Gene position: 4391672-4391292 (Counterclockwise)
Preceding gene: 91790014
Following gene: 91790012
Centisome position: 84.45
GC content: 62.73
Gene sequence:
>381_bases ATGAAATACCTCTGCCTCGCCTACTACAATCCCGAAAAATTCGCCGCACTGGCCCCTGGCGAGGTCGAGGCCCTGGTGAG CCAGTGCCCAGCCAAAGACGCCGAGCTGAAGAAGACTGGCCGCCTGGTGGTGAGCGCCTCGCTCGAGGGCCCGCAGGCCG CCTTCGCCTTGCGCCCGCGCGTTGGCAAACCTCAAGTGACCGACGGCCCCTATGCCGAGGCCAAAGAAATGGTTGGCGGT TTTTTCATCATTGAGGCGGCTGACCGGGACGAGGCGGTGCGGGTGGCTTCGCTGCATCCGGCGGCCACCTTGGGCGAAAA CGTCGGCTGGGCGATCGAGCTGCACCCTATTGGGTTTTTTGAGCAGGCATTTAACCAGTAG
Upstream 100 bases:
>100_bases GAGCGAACTCTTTTTTTCAAGGTTTGCGGATCGGGTGTCGAAATGCAGGTTTGTCGTTCGTCGTAGGGGTGTAAGGTTCA AAATCTGAAAGGACTTCCCC
Downstream 100 bases:
>100_bases GTCGTTGCGGAAAATCCTTCGCTTTCTCGCTCGCACTTCGTCCTTGAGCTGCTGACCGGCGGCGCTGCGCAAAACCCGCG GGGGAAAAAGGCTCGGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: YCII-Related Protein; YCII-Related; DGPF Domain-Containing Protein; DGPF Domain Superfamily; DGPFAETKE Domain-Containing Protein; DGPF Protein; YCII-Like Protein; Dgpfaetke
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MKYLCLAYYNPEKFAALAPGEVEALVSQCPAKDAELKKTGRLVVSASLEGPQAAFALRPRVGKPQVTDGPYAEAKEMVGG FFIIEAADRDEAVRVASLHPAATLGENVGWAIELHPIGFFEQAFNQ
Sequences:
>Translated_126_residues MKYLCLAYYNPEKFAALAPGEVEALVSQCPAKDAELKKTGRLVVSASLEGPQAAFALRPRVGKPQVTDGPYAEAKEMVGG FFIIEAADRDEAVRVASLHPAATLGENVGWAIELHPIGFFEQAFNQ >Mature_126_residues MKYLCLAYYNPEKFAALAPGEVEALVSQCPAKDAELKKTGRLVVSASLEGPQAAFALRPRVGKPQVTDGPYAEAKEMVGG FFIIEAADRDEAVRVASLHPAATLGENVGWAIELHPIGFFEQAFNQ
Specific function: Unknown
COG id: COG3795
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13579; Mature: 13579
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYLCLAYYNPEKFAALAPGEVEALVSQCPAKDAELKKTGRLVVSASLEGPQAAFALRPR CCEEEEEEECCCCEEEECCCHHHHHHHHCCCCCCCHHCCCEEEEEECCCCCCEEEEECCC VGKPQVTDGPYAEAKEMVGGFFIIEAADRDEAVRVASLHPAATLGENVGWAIELHPIGFF CCCCCCCCCCHHHHHHHCCEEEEEEECCCCCEEEEEECCCHHHCCCCCCEEEEEECCCHH EQAFNQ HHHHCC >Mature Secondary Structure MKYLCLAYYNPEKFAALAPGEVEALVSQCPAKDAELKKTGRLVVSASLEGPQAAFALRPR CCEEEEEEECCCCEEEECCCHHHHHHHHCCCCCCCHHCCCEEEEEECCCCCCEEEEECCC VGKPQVTDGPYAEAKEMVGGFFIIEAADRDEAVRVASLHPAATLGENVGWAIELHPIGFF CCCCCCCCCCHHHHHHHCCEEEEEEECCCCCEEEEEECCCHHHCCCCCCEEEEEECCCHH EQAFNQ HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA