Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790013

Identifier: 91790013

GI number: 91790013

Start: 4391292

End: 4391672

Strand: Reverse

Name: 91790013

Synonym: Bpro_4175

Alternate gene names: NA

Gene position: 4391672-4391292 (Counterclockwise)

Preceding gene: 91790014

Following gene: 91790012

Centisome position: 84.45

GC content: 62.73

Gene sequence:

>381_bases
ATGAAATACCTCTGCCTCGCCTACTACAATCCCGAAAAATTCGCCGCACTGGCCCCTGGCGAGGTCGAGGCCCTGGTGAG
CCAGTGCCCAGCCAAAGACGCCGAGCTGAAGAAGACTGGCCGCCTGGTGGTGAGCGCCTCGCTCGAGGGCCCGCAGGCCG
CCTTCGCCTTGCGCCCGCGCGTTGGCAAACCTCAAGTGACCGACGGCCCCTATGCCGAGGCCAAAGAAATGGTTGGCGGT
TTTTTCATCATTGAGGCGGCTGACCGGGACGAGGCGGTGCGGGTGGCTTCGCTGCATCCGGCGGCCACCTTGGGCGAAAA
CGTCGGCTGGGCGATCGAGCTGCACCCTATTGGGTTTTTTGAGCAGGCATTTAACCAGTAG

Upstream 100 bases:

>100_bases
GAGCGAACTCTTTTTTTCAAGGTTTGCGGATCGGGTGTCGAAATGCAGGTTTGTCGTTCGTCGTAGGGGTGTAAGGTTCA
AAATCTGAAAGGACTTCCCC

Downstream 100 bases:

>100_bases
GTCGTTGCGGAAAATCCTTCGCTTTCTCGCTCGCACTTCGTCCTTGAGCTGCTGACCGGCGGCGCTGCGCAAAACCCGCG
GGGGAAAAAGGCTCGGCATG

Product: hypothetical protein

Products: NA

Alternate protein names: YCII-Related Protein; YCII-Related; DGPF Domain-Containing Protein; DGPF Domain Superfamily; DGPFAETKE Domain-Containing Protein; DGPF Protein; YCII-Like Protein; Dgpfaetke

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MKYLCLAYYNPEKFAALAPGEVEALVSQCPAKDAELKKTGRLVVSASLEGPQAAFALRPRVGKPQVTDGPYAEAKEMVGG
FFIIEAADRDEAVRVASLHPAATLGENVGWAIELHPIGFFEQAFNQ

Sequences:

>Translated_126_residues
MKYLCLAYYNPEKFAALAPGEVEALVSQCPAKDAELKKTGRLVVSASLEGPQAAFALRPRVGKPQVTDGPYAEAKEMVGG
FFIIEAADRDEAVRVASLHPAATLGENVGWAIELHPIGFFEQAFNQ
>Mature_126_residues
MKYLCLAYYNPEKFAALAPGEVEALVSQCPAKDAELKKTGRLVVSASLEGPQAAFALRPRVGKPQVTDGPYAEAKEMVGG
FFIIEAADRDEAVRVASLHPAATLGENVGWAIELHPIGFFEQAFNQ

Specific function: Unknown

COG id: COG3795

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13579; Mature: 13579

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLCLAYYNPEKFAALAPGEVEALVSQCPAKDAELKKTGRLVVSASLEGPQAAFALRPR
CCEEEEEEECCCCEEEECCCHHHHHHHHCCCCCCCHHCCCEEEEEECCCCCCEEEEECCC
VGKPQVTDGPYAEAKEMVGGFFIIEAADRDEAVRVASLHPAATLGENVGWAIELHPIGFF
CCCCCCCCCCHHHHHHHCCEEEEEEECCCCCEEEEEECCCHHHCCCCCCEEEEEECCCHH
EQAFNQ
HHHHCC
>Mature Secondary Structure
MKYLCLAYYNPEKFAALAPGEVEALVSQCPAKDAELKKTGRLVVSASLEGPQAAFALRPR
CCEEEEEEECCCCEEEECCCHHHHHHHHCCCCCCCHHCCCEEEEEECCCCCCEEEEECCC
VGKPQVTDGPYAEAKEMVGGFFIIEAADRDEAVRVASLHPAATLGENVGWAIELHPIGFF
CCCCCCCCCCHHHHHHHCCEEEEEEECCCCCEEEEEECCCHHHCCCCCCEEEEEECCCHH
EQAFNQ
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA