| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790005
Identifier: 91790005
GI number: 91790005
Start: 4383468
End: 4385066
Strand: Reverse
Name: 91790005
Synonym: Bpro_4167
Alternate gene names: NA
Gene position: 4385066-4383468 (Counterclockwise)
Preceding gene: 91790007
Following gene: 91790004
Centisome position: 84.32
GC content: 70.04
Gene sequence:
>1599_bases ATGAATGATCCCGTGCCGATCACGCTCTCTCCCTCTATCTGGAGTCCCCTGCGCCAGCCCGCCTTTCGCGGGCTTTGGTT TTGCGGCGGCGTCTTTTTCATTGGCAACGGCATGCAGTCCATGGTGGCCGCCTGGCTCATGGTCGAGCTGACCGGTTCGT CCTTCCTCGCCGCGCTCGTGCAGACCGCGGTTTTCCTGCCCATGTTCCTGCTGGCACTGCCTGCGGGCGTGCTGGCCGAC ACCAGCGATCGCCGGCGCCTGATCTCCAGCGCGCTGCTGGCGCAGGTGGCCGCATGCGCGCTGCTGGCCTTGCTGGTGCT GGGCGGCTGGGGTGGGGCGGCATCGGTACTTTTCCTGGTGTTTGTGTGCGGCTGCTGCACGGCGGTGCTGACGCCGGCCT GGAACTCGTCCGTGGTGGACCCGGTTCCCCGGGCCGAATGGCCGCAGGCCATCACCGCCGTCAGCATTGCCTACAACGTG GCGCGCGCCATAGGCCCCACGCTCGCCGGTGTGCTGTTCGCACTCCTGGGTGCGGGCTGGGTGTTCGCTGTCACGGTATT CACGACGCTGGTCATGTGGGAATCGATCCGCCGCTGGCCGCCGCGCGCTCACCCGCCGTCGCGCCTGCCGGCCGAGCGCC TGTGGAGCGGGACGCTCAGCGGGCTGCGCTTTGCCTGGCACTCGCGCATGATCCTGGCGCAGCTGGTGCGGGCCATGGCC TTTGGCGCGGCCGGCTCGGCCCTGTGGGCGCTGCTGCCTGTGATCGCACAGCGCCAGCTGGGCGCCGGCGCGCAAGGCTT CGGCCTGCTGATGGGCTGCATGGGCACGGGCGCGGTGGTCACCGGTCTGGTCATCGGGCGTATGCGCGTGCGTTTCGGAC TCGACGCTGTCGTTGGCGCCAGCTGCGTGGCGTTTTCTGCCGTCATGCTGCTCACCGCGTGGGTCCGCGTGCCGCTGCTG ATCTATGGCGCCATGGCGGTGGGCGGCGCCGCGTGGATGTCGGCCATGTCGACCTTCAACACCGCCACGCAGTCCAGCGC GCCGCCGTGGGTGCGCTCGCGCGCGGTGGCGCTGCATATCGTGGCCGCGCTGGGCGCCTTCGCCTTCGGCTCGGCGTTCT GGGGCGCGGTGTCCGACATCGCCGGCCTGACAGCCGCGCTGGTCGCGGCCGGCCTGCTGATGGCCGCCGGCTTGCTGCTG GCGCGCCCGTTCCCATTGCGCGTGGGCGCGGACCACGAAGTGACACAGGGCACGCCCTGGGAGGAGTTGTTCGTGGCGGC CGAACCCAGCCCCGAGGCCGGCCCGGTGGCGGTGGAGGTGGCCTACCGCATCCGCCCCGGGGAAGACCACGCCTTTCTCG ACACCATCGGCCAGATGAAGGCGCCGCGCCGGCGCGATGGTGCCACCTTCTGGCGCGTCTACAAGGACCTGGGCGAACCG TCCCGTTATGTCGAGCGTTTCCTGGTGACCTCATGGGCCGATTACCTGCGCCAGCGCGCTCGTGCGACCGTGGCCGATCA CACGCTTGAAGCCGAGGTGCGCGCCTTCCTGGCGCACGGCGAAACCGCGCGCATGTCGCACTACATTGCAGAGCGCTGA
Upstream 100 bases:
>100_bases CCGGTAAGTCGCCCAGCTCAAGTGAAGAGTCGCGGGCGCTGCAACCCGGTCAAGCGCGATGGTCGGCTGATGGCTACCCG TTCTGGGAAATAATGATCCT
Downstream 100 bases:
>100_bases GGCGACGGCTGCCGGACGGTTATGGAAGGGCAGTTGCCAACCAGTTCCCAGCGACGGGGCGTGGCCGACTGCCATGGTTC GCATGGCCATGGGCGATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: MFS Family Transporter; Facilitator Superfamily Protein; Facilitator Transporter; MFS Transporter; Facilitator Superfamily Permease; Facilitator Superfamily; Integral Membrane Efflux Protein; Transport Transmembrane Protein; Transporter Facilitator Family; Facilitator Superfamily Transmembrane Transporter; Facilitator Superfamily Transporter; ABC Transporter Permease Protein; Facilitator Transpoter; Dioxygenase; MFS Family Diterpenoid Transporter
Number of amino acids: Translated: 532; Mature: 532
Protein sequence:
>532_residues MNDPVPITLSPSIWSPLRQPAFRGLWFCGGVFFIGNGMQSMVAAWLMVELTGSSFLAALVQTAVFLPMFLLALPAGVLAD TSDRRRLISSALLAQVAACALLALLVLGGWGGAASVLFLVFVCGCCTAVLTPAWNSSVVDPVPRAEWPQAITAVSIAYNV ARAIGPTLAGVLFALLGAGWVFAVTVFTTLVMWESIRRWPPRAHPPSRLPAERLWSGTLSGLRFAWHSRMILAQLVRAMA FGAAGSALWALLPVIAQRQLGAGAQGFGLLMGCMGTGAVVTGLVIGRMRVRFGLDAVVGASCVAFSAVMLLTAWVRVPLL IYGAMAVGGAAWMSAMSTFNTATQSSAPPWVRSRAVALHIVAALGAFAFGSAFWGAVSDIAGLTAALVAAGLLMAAGLLL ARPFPLRVGADHEVTQGTPWEELFVAAEPSPEAGPVAVEVAYRIRPGEDHAFLDTIGQMKAPRRRDGATFWRVYKDLGEP SRYVERFLVTSWADYLRQRARATVADHTLEAEVRAFLAHGETARMSHYIAER
Sequences:
>Translated_532_residues MNDPVPITLSPSIWSPLRQPAFRGLWFCGGVFFIGNGMQSMVAAWLMVELTGSSFLAALVQTAVFLPMFLLALPAGVLAD TSDRRRLISSALLAQVAACALLALLVLGGWGGAASVLFLVFVCGCCTAVLTPAWNSSVVDPVPRAEWPQAITAVSIAYNV ARAIGPTLAGVLFALLGAGWVFAVTVFTTLVMWESIRRWPPRAHPPSRLPAERLWSGTLSGLRFAWHSRMILAQLVRAMA FGAAGSALWALLPVIAQRQLGAGAQGFGLLMGCMGTGAVVTGLVIGRMRVRFGLDAVVGASCVAFSAVMLLTAWVRVPLL IYGAMAVGGAAWMSAMSTFNTATQSSAPPWVRSRAVALHIVAALGAFAFGSAFWGAVSDIAGLTAALVAAGLLMAAGLLL ARPFPLRVGADHEVTQGTPWEELFVAAEPSPEAGPVAVEVAYRIRPGEDHAFLDTIGQMKAPRRRDGATFWRVYKDLGEP SRYVERFLVTSWADYLRQRARATVADHTLEAEVRAFLAHGETARMSHYIAER >Mature_532_residues MNDPVPITLSPSIWSPLRQPAFRGLWFCGGVFFIGNGMQSMVAAWLMVELTGSSFLAALVQTAVFLPMFLLALPAGVLAD TSDRRRLISSALLAQVAACALLALLVLGGWGGAASVLFLVFVCGCCTAVLTPAWNSSVVDPVPRAEWPQAITAVSIAYNV ARAIGPTLAGVLFALLGAGWVFAVTVFTTLVMWESIRRWPPRAHPPSRLPAERLWSGTLSGLRFAWHSRMILAQLVRAMA FGAAGSALWALLPVIAQRQLGAGAQGFGLLMGCMGTGAVVTGLVIGRMRVRFGLDAVVGASCVAFSAVMLLTAWVRVPLL IYGAMAVGGAAWMSAMSTFNTATQSSAPPWVRSRAVALHIVAALGAFAFGSAFWGAVSDIAGLTAALVAAGLLMAAGLLL ARPFPLRVGADHEVTQGTPWEELFVAAEPSPEAGPVAVEVAYRIRPGEDHAFLDTIGQMKAPRRRDGATFWRVYKDLGEP SRYVERFLVTSWADYLRQRARATVADHTLEAEVRAFLAHGETARMSHYIAER
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56674; Mature: 56674
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDPVPITLSPSIWSPLRQPAFRGLWFCGGVFFIGNGMQSMVAAWLMVELTGSSFLAALV CCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHH QTAVFLPMFLLALPAGVLADTSDRRRLISSALLAQVAACALLALLVLGGWGGAASVLFLV HHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FVCGCCTAVLTPAWNSSVVDPVPRAEWPQAITAVSIAYNVARAIGPTLAGVLFALLGAGW HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFAVTVFTTLVMWESIRRWPPRAHPPSRLPAERLWSGTLSGLRFAWHSRMILAQLVRAMA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGAAGSALWALLPVIAQRQLGAGAQGFGLLMGCMGTGAVVTGLVIGRMRVRFGLDAVVGA HCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHH SCVAFSAVMLLTAWVRVPLLIYGAMAVGGAAWMSAMSTFNTATQSSAPPWVRSRAVALHI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH VAALGAFAFGSAFWGAVSDIAGLTAALVAAGLLMAAGLLLARPFPLRVGADHEVTQGTPW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCH EELFVAAEPSPEAGPVAVEVAYRIRPGEDHAFLDTIGQMKAPRRRDGATFWRVYKDLGEP HHEEEECCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCH SRYVERFLVTSWADYLRQRARATVADHTLEAEVRAFLAHGETARMSHYIAER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure MNDPVPITLSPSIWSPLRQPAFRGLWFCGGVFFIGNGMQSMVAAWLMVELTGSSFLAALV CCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHH QTAVFLPMFLLALPAGVLADTSDRRRLISSALLAQVAACALLALLVLGGWGGAASVLFLV HHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FVCGCCTAVLTPAWNSSVVDPVPRAEWPQAITAVSIAYNVARAIGPTLAGVLFALLGAGW HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFAVTVFTTLVMWESIRRWPPRAHPPSRLPAERLWSGTLSGLRFAWHSRMILAQLVRAMA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGAAGSALWALLPVIAQRQLGAGAQGFGLLMGCMGTGAVVTGLVIGRMRVRFGLDAVVGA HCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHH SCVAFSAVMLLTAWVRVPLLIYGAMAVGGAAWMSAMSTFNTATQSSAPPWVRSRAVALHI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH VAALGAFAFGSAFWGAVSDIAGLTAALVAAGLLMAAGLLLARPFPLRVGADHEVTQGTPW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCH EELFVAAEPSPEAGPVAVEVAYRIRPGEDHAFLDTIGQMKAPRRRDGATFWRVYKDLGEP HHEEEECCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCH SRYVERFLVTSWADYLRQRARATVADHTLEAEVRAFLAHGETARMSHYIAER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA