| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789972
Identifier: 91789972
GI number: 91789972
Start: 4339260
End: 4340075
Strand: Direct
Name: 91789972
Synonym: Bpro_4133
Alternate gene names: NA
Gene position: 4339260-4340075 (Clockwise)
Preceding gene: 91789953
Following gene: 91789974
Centisome position: 83.44
GC content: 65.69
Gene sequence:
>816_bases ATGCAAGAACTCGACAACTGGCCCGCTGACGAGCGCCGCCGGATCTCCGGTGTTTTCACCGACATCGACGACACCCTGAC CACCGAAGGGGCGATTACCCTTGATGCGCTGGAGGGCTTGGCTGAATTGAAAGCCGCCGGGTTCAAGGTGGTGGCGATCA CCGGACGGCCGGTGGGCTGGAGCGAACCTTTCGCGGCAAGCTGGCCGGTCGATGCCATCGTGGCCGAAAACGGCGCGGTG GCACTGCTGCCGGAGCCCCAAAGCGCCGCGCCGCGGCCGCTCTCAAAAATCTACCAGCAGGACGCGGCCACGCGTGCAGC CAACGTCAGCCGCATGCGGGCTGTGCTGGCGCGCATAGAGCGCGAACTGCCCGGCATCCACCGCGCCACCGACTCGCCAG GCCGCGAAACCGACATCGCCATCGACCACAGCGAGTTCGCGCAGCTCAGCGAAGCGCAGATCGCCGTGGTGGTGGCGCTG ATGAAAAGCGAGGGCATGCACGCCACGGTGAGCAGCATCCACATCAACGGCTGGTACGGCGGCCACAACAAGCTTGAAGG CGCGCGCTGGATTGTTCGTGAACTCTGGCAGCGCGACCTCGACGCCGAGATGGCGCGCTGGGTCTACGTGGGCGATTCGA CCAACGACCAGCTGATGTTCAAGGCCTTTGCCAACAGCGTGGGCGTGGCCAACATCGCGCGCTTTGTGCCGCAGCTGGCG CACCTGCCGCGCTATGTGACGCGGGGCGAGCGCGGCGCGGGCTTTGCCGAGGTGGCGAAGATTTTGCTCACCCCTGCTGA CACTCACTTCGTGTAG
Upstream 100 bases:
>100_bases CGACAGAGGCGAAGCGTCTGGCGAGCCGCGGCCTGCAAGGCCTCGGGCGCTACACGAAGTGAGCAACCGTGGGGGCACCC CAGCATGCGAAAATTTCACG
Downstream 100 bases:
>100_bases CGTCCCCTCCCCTTCCAGGGGACGAAGAAACATCACCCCTATCGGACGCGCACTTCGTGTCGCGCCTTTTCCCCTTCCAG GGGACGGCGCCTGCAGCCCG
Product: HAD family hydrolase
Products: NA
Alternate protein names: HAD-Superfamily Hydrolase Subfamily IIB; Hydrolase; Had-Superfamily Hydrolase Subfamily IIb; HAD-Superfamily Hydrolase; Hydrolase Protein; IIB Family HAD Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Hydrolase Of Had Superfamily Protein; Archae-Like Hydrolase Family Protein
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MQELDNWPADERRRISGVFTDIDDTLTTEGAITLDALEGLAELKAAGFKVVAITGRPVGWSEPFAASWPVDAIVAENGAV ALLPEPQSAAPRPLSKIYQQDAATRAANVSRMRAVLARIERELPGIHRATDSPGRETDIAIDHSEFAQLSEAQIAVVVAL MKSEGMHATVSSIHINGWYGGHNKLEGARWIVRELWQRDLDAEMARWVYVGDSTNDQLMFKAFANSVGVANIARFVPQLA HLPRYVTRGERGAGFAEVAKILLTPADTHFV
Sequences:
>Translated_271_residues MQELDNWPADERRRISGVFTDIDDTLTTEGAITLDALEGLAELKAAGFKVVAITGRPVGWSEPFAASWPVDAIVAENGAV ALLPEPQSAAPRPLSKIYQQDAATRAANVSRMRAVLARIERELPGIHRATDSPGRETDIAIDHSEFAQLSEAQIAVVVAL MKSEGMHATVSSIHINGWYGGHNKLEGARWIVRELWQRDLDAEMARWVYVGDSTNDQLMFKAFANSVGVANIARFVPQLA HLPRYVTRGERGAGFAEVAKILLTPADTHFV >Mature_271_residues MQELDNWPADERRRISGVFTDIDDTLTTEGAITLDALEGLAELKAAGFKVVAITGRPVGWSEPFAASWPVDAIVAENGAV ALLPEPQSAAPRPLSKIYQQDAATRAANVSRMRAVLARIERELPGIHRATDSPGRETDIAIDHSEFAQLSEAQIAVVVAL MKSEGMHATVSSIHINGWYGGHNKLEGARWIVRELWQRDLDAEMARWVYVGDSTNDQLMFKAFANSVGVANIARFVPQLA HLPRYVTRGERGAGFAEVAKILLTPADTHFV
Specific function: Unknown
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29620; Mature: 29620
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQELDNWPADERRRISGVFTDIDDTLTTEGAITLDALEGLAELKAAGFKVVAITGRPVGW CCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCEEHHHHHHHHHHHHCCEEEEEEECCCCCC SEPFAASWPVDAIVAENGAVALLPEPQSAAPRPLSKIYQQDAATRAANVSRMRAVLARIE CCCCCCCCCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RELPGIHRATDSPGRETDIAIDHSEFAQLSEAQIAVVVALMKSEGMHATVSSIHINGWYG HHCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEC GHNKLEGARWIVRELWQRDLDAEMARWVYVGDSTNDQLMFKAFANSVGVANIARFVPQLA CCCCCCHHHHHHHHHHHHCCCHHHEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHH HLPRYVTRGERGAGFAEVAKILLTPADTHFV HHHHHHHCCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQELDNWPADERRRISGVFTDIDDTLTTEGAITLDALEGLAELKAAGFKVVAITGRPVGW CCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCEEHHHHHHHHHHHHCCEEEEEEECCCCCC SEPFAASWPVDAIVAENGAVALLPEPQSAAPRPLSKIYQQDAATRAANVSRMRAVLARIE CCCCCCCCCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RELPGIHRATDSPGRETDIAIDHSEFAQLSEAQIAVVVALMKSEGMHATVSSIHINGWYG HHCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEC GHNKLEGARWIVRELWQRDLDAEMARWVYVGDSTNDQLMFKAFANSVGVANIARFVPQLA CCCCCCHHHHHHHHHHHHCCCHHHEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHH HLPRYVTRGERGAGFAEVAKILLTPADTHFV HHHHHHHCCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA