Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789972

Identifier: 91789972

GI number: 91789972

Start: 4339260

End: 4340075

Strand: Direct

Name: 91789972

Synonym: Bpro_4133

Alternate gene names: NA

Gene position: 4339260-4340075 (Clockwise)

Preceding gene: 91789953

Following gene: 91789974

Centisome position: 83.44

GC content: 65.69

Gene sequence:

>816_bases
ATGCAAGAACTCGACAACTGGCCCGCTGACGAGCGCCGCCGGATCTCCGGTGTTTTCACCGACATCGACGACACCCTGAC
CACCGAAGGGGCGATTACCCTTGATGCGCTGGAGGGCTTGGCTGAATTGAAAGCCGCCGGGTTCAAGGTGGTGGCGATCA
CCGGACGGCCGGTGGGCTGGAGCGAACCTTTCGCGGCAAGCTGGCCGGTCGATGCCATCGTGGCCGAAAACGGCGCGGTG
GCACTGCTGCCGGAGCCCCAAAGCGCCGCGCCGCGGCCGCTCTCAAAAATCTACCAGCAGGACGCGGCCACGCGTGCAGC
CAACGTCAGCCGCATGCGGGCTGTGCTGGCGCGCATAGAGCGCGAACTGCCCGGCATCCACCGCGCCACCGACTCGCCAG
GCCGCGAAACCGACATCGCCATCGACCACAGCGAGTTCGCGCAGCTCAGCGAAGCGCAGATCGCCGTGGTGGTGGCGCTG
ATGAAAAGCGAGGGCATGCACGCCACGGTGAGCAGCATCCACATCAACGGCTGGTACGGCGGCCACAACAAGCTTGAAGG
CGCGCGCTGGATTGTTCGTGAACTCTGGCAGCGCGACCTCGACGCCGAGATGGCGCGCTGGGTCTACGTGGGCGATTCGA
CCAACGACCAGCTGATGTTCAAGGCCTTTGCCAACAGCGTGGGCGTGGCCAACATCGCGCGCTTTGTGCCGCAGCTGGCG
CACCTGCCGCGCTATGTGACGCGGGGCGAGCGCGGCGCGGGCTTTGCCGAGGTGGCGAAGATTTTGCTCACCCCTGCTGA
CACTCACTTCGTGTAG

Upstream 100 bases:

>100_bases
CGACAGAGGCGAAGCGTCTGGCGAGCCGCGGCCTGCAAGGCCTCGGGCGCTACACGAAGTGAGCAACCGTGGGGGCACCC
CAGCATGCGAAAATTTCACG

Downstream 100 bases:

>100_bases
CGTCCCCTCCCCTTCCAGGGGACGAAGAAACATCACCCCTATCGGACGCGCACTTCGTGTCGCGCCTTTTCCCCTTCCAG
GGGACGGCGCCTGCAGCCCG

Product: HAD family hydrolase

Products: NA

Alternate protein names: HAD-Superfamily Hydrolase Subfamily IIB; Hydrolase; Had-Superfamily Hydrolase Subfamily IIb; HAD-Superfamily Hydrolase; Hydrolase Protein; IIB Family HAD Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Hydrolase Of Had Superfamily Protein; Archae-Like Hydrolase Family Protein

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MQELDNWPADERRRISGVFTDIDDTLTTEGAITLDALEGLAELKAAGFKVVAITGRPVGWSEPFAASWPVDAIVAENGAV
ALLPEPQSAAPRPLSKIYQQDAATRAANVSRMRAVLARIERELPGIHRATDSPGRETDIAIDHSEFAQLSEAQIAVVVAL
MKSEGMHATVSSIHINGWYGGHNKLEGARWIVRELWQRDLDAEMARWVYVGDSTNDQLMFKAFANSVGVANIARFVPQLA
HLPRYVTRGERGAGFAEVAKILLTPADTHFV

Sequences:

>Translated_271_residues
MQELDNWPADERRRISGVFTDIDDTLTTEGAITLDALEGLAELKAAGFKVVAITGRPVGWSEPFAASWPVDAIVAENGAV
ALLPEPQSAAPRPLSKIYQQDAATRAANVSRMRAVLARIERELPGIHRATDSPGRETDIAIDHSEFAQLSEAQIAVVVAL
MKSEGMHATVSSIHINGWYGGHNKLEGARWIVRELWQRDLDAEMARWVYVGDSTNDQLMFKAFANSVGVANIARFVPQLA
HLPRYVTRGERGAGFAEVAKILLTPADTHFV
>Mature_271_residues
MQELDNWPADERRRISGVFTDIDDTLTTEGAITLDALEGLAELKAAGFKVVAITGRPVGWSEPFAASWPVDAIVAENGAV
ALLPEPQSAAPRPLSKIYQQDAATRAANVSRMRAVLARIERELPGIHRATDSPGRETDIAIDHSEFAQLSEAQIAVVVAL
MKSEGMHATVSSIHINGWYGGHNKLEGARWIVRELWQRDLDAEMARWVYVGDSTNDQLMFKAFANSVGVANIARFVPQLA
HLPRYVTRGERGAGFAEVAKILLTPADTHFV

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29620; Mature: 29620

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQELDNWPADERRRISGVFTDIDDTLTTEGAITLDALEGLAELKAAGFKVVAITGRPVGW
CCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCEEHHHHHHHHHHHHCCEEEEEEECCCCCC
SEPFAASWPVDAIVAENGAVALLPEPQSAAPRPLSKIYQQDAATRAANVSRMRAVLARIE
CCCCCCCCCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RELPGIHRATDSPGRETDIAIDHSEFAQLSEAQIAVVVALMKSEGMHATVSSIHINGWYG
HHCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEC
GHNKLEGARWIVRELWQRDLDAEMARWVYVGDSTNDQLMFKAFANSVGVANIARFVPQLA
CCCCCCHHHHHHHHHHHHCCCHHHEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
HLPRYVTRGERGAGFAEVAKILLTPADTHFV
HHHHHHHCCCCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQELDNWPADERRRISGVFTDIDDTLTTEGAITLDALEGLAELKAAGFKVVAITGRPVGW
CCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCEEHHHHHHHHHHHHCCEEEEEEECCCCCC
SEPFAASWPVDAIVAENGAVALLPEPQSAAPRPLSKIYQQDAATRAANVSRMRAVLARIE
CCCCCCCCCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RELPGIHRATDSPGRETDIAIDHSEFAQLSEAQIAVVVALMKSEGMHATVSSIHINGWYG
HHCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEC
GHNKLEGARWIVRELWQRDLDAEMARWVYVGDSTNDQLMFKAFANSVGVANIARFVPQLA
CCCCCCHHHHHHHHHHHHCCCHHHEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
HLPRYVTRGERGAGFAEVAKILLTPADTHFV
HHHHHHHCCCCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA