| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91789950
Identifier: 91789950
GI number: 91789950
Start: 4318120
End: 4318827
Strand: Reverse
Name: 91789950
Synonym: Bpro_4111
Alternate gene names: NA
Gene position: 4318827-4318120 (Counterclockwise)
Preceding gene: 91789951
Following gene: 91789949
Centisome position: 83.05
GC content: 63.56
Gene sequence:
>708_bases TTGAAATTTCGCCTGTTTCGCCGCCGCCTGACCATCAGTTCGCCGCGCATGGCCATCCGCAGCTCGCTTCCCTGGCCCCT GCGCTGGATCGCCGGCGCCCTGATGCTGGGATTTTCTGCCGCCATCGCCTTGTGGGCCTTCGAGTTTGGCAAGAGTATTG CGGGGCTGGACACCAACGCCAAGCAGGAGCTCAGCCTGCTGCGGCAGGAAGTCGCCAGCCTGCGCTCGGACCGCGACAAG GCGCAGTCGGTTGCCAACACCTCCGGCAGCCTGTTGACGGCCGAGAAGGCGCTGCAGGAGAAAATGATGAGCCAGATCCG CCAGCTGGAATCGGACAACCGCGCGCTGCGCGACGACCTCGGGTTTTTCGAGAAGCTGTTGCCCTCAGGGGGCGCCGAAG TGGCCTCGCTGCGCAGCTTGCAGGCCGAGGTGTTGTCGGAGACCCAGCTCAAATGGCAGGTGCTGGTGATCCAGCCGCTC AAGAATGCCCCGGTTTTCAATGGCAGGCTCGACCTGACGGTGAACGGCACACAGGCCGGCGAGCCCTGGGCCATGACCTT GCCCGGTGGTCCGCAGGCGTTGCAGTTCAAACAGTACCGCCGCGTGGAAGGTGTCCTCGATTTGCCTCCCCAGGCCGTGG TAAAAACCGTGACCGCCAAAGTGCTTGAAGGCACGACAGTCCGCTCCGTTCAGACCTTCAAGCTCTGA
Upstream 100 bases:
>100_bases TTTGATGCAATCCCTTACGTTGCCTGCCGCACAGAGGCCGGGCCGGGCCCTGTCTGCGTGCACAATGCAGCCTCCCGAAC GAAAACGCTGGACCTGCCCT
Downstream 100 bases:
>100_bases CTTCCCGCCTCGTCCTCCATTCCAATCCAGCCCCACCTCGAGGAACCCGTATATGTTCGGTAAAAAGAAGCAGCCCCCCA TTAGAAGCCTGATTGCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MKFRLFRRRLTISSPRMAIRSSLPWPLRWIAGALMLGFSAAIALWAFEFGKSIAGLDTNAKQELSLLRQEVASLRSDRDK AQSVANTSGSLLTAEKALQEKMMSQIRQLESDNRALRDDLGFFEKLLPSGGAEVASLRSLQAEVLSETQLKWQVLVIQPL KNAPVFNGRLDLTVNGTQAGEPWAMTLPGGPQALQFKQYRRVEGVLDLPPQAVVKTVTAKVLEGTTVRSVQTFKL
Sequences:
>Translated_235_residues MKFRLFRRRLTISSPRMAIRSSLPWPLRWIAGALMLGFSAAIALWAFEFGKSIAGLDTNAKQELSLLRQEVASLRSDRDK AQSVANTSGSLLTAEKALQEKMMSQIRQLESDNRALRDDLGFFEKLLPSGGAEVASLRSLQAEVLSETQLKWQVLVIQPL KNAPVFNGRLDLTVNGTQAGEPWAMTLPGGPQALQFKQYRRVEGVLDLPPQAVVKTVTAKVLEGTTVRSVQTFKL >Mature_235_residues MKFRLFRRRLTISSPRMAIRSSLPWPLRWIAGALMLGFSAAIALWAFEFGKSIAGLDTNAKQELSLLRQEVASLRSDRDK AQSVANTSGSLLTAEKALQEKMMSQIRQLESDNRALRDDLGFFEKLLPSGGAEVASLRSLQAEVLSETQLKWQVLVIQPL KNAPVFNGRLDLTVNGTQAGEPWAMTLPGGPQALQFKQYRRVEGVLDLPPQAVVKTVTAKVLEGTTVRSVQTFKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26008; Mature: 26008
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFRLFRRRLTISSPRMAIRSSLPWPLRWIAGALMLGFSAAIALWAFEFGKSIAGLDTNA CCHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCH KQELSLLRQEVASLRSDRDKAQSVANTSGSLLTAEKALQEKMMSQIRQLESDNRALRDDL HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH GFFEKLLPSGGAEVASLRSLQAEVLSETQLKWQVLVIQPLKNAPVFNGRLDLTVNGTQAG HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEECCEEEEEECCCCCC EPWAMTLPGGPQALQFKQYRRVEGVLDLPPQAVVKTVTAKVLEGTTVRSVQTFKL CCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHCEEEECC >Mature Secondary Structure MKFRLFRRRLTISSPRMAIRSSLPWPLRWIAGALMLGFSAAIALWAFEFGKSIAGLDTNA CCHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCH KQELSLLRQEVASLRSDRDKAQSVANTSGSLLTAEKALQEKMMSQIRQLESDNRALRDDL HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH GFFEKLLPSGGAEVASLRSLQAEVLSETQLKWQVLVIQPLKNAPVFNGRLDLTVNGTQAG HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEECCEEEEEECCCCCC EPWAMTLPGGPQALQFKQYRRVEGVLDLPPQAVVKTVTAKVLEGTTVRSVQTFKL CCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA