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The map label for this gene is nodV [H]

Identifier: 91789939

GI number: 91789939

Start: 4308105

End: 4309559

Strand: Direct

Name: nodV [H]

Synonym: Bpro_4100

Alternate gene names: 91789939

Gene position: 4308105-4309559 (Clockwise)

Preceding gene: 91789935

Following gene: 91789940

Centisome position: 82.84

GC content: 70.79

Gene sequence:

>1455_bases
ATGCTGCAACTGCGACAACGTTGGCTGGTCTGGGCCGTCCTCTGGTGCGCCATCACGGCACTGGGCTGCGTGGCGCTGGT
GCGCCTGGAGCTGGCCCAGCTGCGCGAGAATTTTGAAACCGACGCCCGCATTGCGCACCGGCTGCTGAGCCAGCGCGTGG
TGCAGCACGACGCCGTCCTGGCCACGCTGGCGCTGCTGCAGCCCGCTGCCGACGCATCCCGTCCCGAGCAGCGCCTGCCG
TCGGTCTACCCGCAGATCATTGGCGTGCACCGGCAGGACCGCGATGCCGTCTGGCCCAATGAACGCCTGCGCAATGCGGC
GCCCCTGTCGCGGGCCCTGCGCAGGCCGGTGCTGGCGGAGGCGGATCTTGCCCGCGGCCGCTATCAGCTGGTGTTGGCCG
CCGACCCTACGAGCTACGCGCTGCAACTGGACTTGCGTGCCGTGGTGCCCTGGAGCGAATGGCCCATGGCGCCGGACACC
AGCCCGGTGCGCGTGACGCTGGAGCATGAAGGGCAGATTTTCGTGCTGCAGCCCGGCCATCTTCGCGAGGGCGGCTGGCG
CTTTGAATTCCACAAGCACCTGGCCGCCGAGAGCCAGCCGTTTGACGTGTTTGCGCTGCGCCAGGTCGGCTGGGGCGAAC
TGCCCTGGGGCTGGATGCTGGCCTGGGCGCTGCTGGTGGCTGCCGTGCTGGCGGCCTGGCAGGCCCTGCTGCGCCAGCGC
GCCGAGCGCCAGCGCGCCGAGGAACTGCTGCGGCTGGGCCAGGTGGGGCGGCTGAACACGCTGGGCGAACTCGCGGCCGG
CATGGCCCACGAGCTGAACCAGCCGCTGACCGCCGTGCTCGCCAACACCCAGGCCGCTGGCCGGCTGCTCAACGACGAGC
CGCCCGAGCTGGCCAGCGCCCGGGCCGCCATGGCCCAGGCCGTCGAGCAGGCCCGCCGCGCGTCCGAGGTCGTGGGCCGC
TTGCGCCGTGCGGTAGAGCGCCCAGGCCTGGCTGCGCAACCCGTGGTGCTGCAGGGCGCGGTGCGCAACGCGCTGTACCT
GCTGGAGCCCGAGCTCAAACGGCGCGAGATAACGCCCCAGCTGGAGATGCCGTCCGCCCCCGTCACGGTTCTGGCCGAGC
CGGTGGCGCTGGAACAGATCATTCATAACCTGCTGATGAATGCCCTGCAGGCCCTGGAACAGGTCCCGGCCACCGAACGC
CGGCTCGGCGTGACGCTGGCTGAGGCAGACAGGCAAGGGGTGGTGACCATCAGCGACTGTGGCCCAGGCATGGCGGCCGA
CGTGCTGCCGCGCATTTTCGAGCCCTTCTTCACCACCCGCGACGCCGGCCTCGGGCTGGGACTGAGCCTGTGCGAAACAC
TGGCCACCGGCATGGGCGGCAGCCTGACGGCGGCACACAACCTGCCGCGCGGCGCGGTATTCAGGCTGTCCTTACCCCTG
GCAGACACACCATGA

Upstream 100 bases:

>100_bases
GAGCAGGCGTTGCGGCGTCAGAAATTGCAGGTCCAGTCGACTCATGCGCCCATTGTGAGCGATGCCGGGCCACGCCAACA
AGCTATGCAAGAATGCGGCG

Downstream 100 bases:

>100_bases
AAGAACGCTCCGGCAACGCACCCCGGGGCGCGGCGGGACCCCATGAGGAAAAAACCGCGGGGGCCCTGCTGTCACCGCTG
ATCCACCTGATCGACGACGA

Product: periplasmic sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MLQLRQRWLVWAVLWCAITALGCVALVRLELAQLRENFETDARIAHRLLSQRVVQHDAVLATLALLQPAADASRPEQRLP
SVYPQIIGVHRQDRDAVWPNERLRNAAPLSRALRRPVLAEADLARGRYQLVLAADPTSYALQLDLRAVVPWSEWPMAPDT
SPVRVTLEHEGQIFVLQPGHLREGGWRFEFHKHLAAESQPFDVFALRQVGWGELPWGWMLAWALLVAAVLAAWQALLRQR
AERQRAEELLRLGQVGRLNTLGELAAGMAHELNQPLTAVLANTQAAGRLLNDEPPELASARAAMAQAVEQARRASEVVGR
LRRAVERPGLAAQPVVLQGAVRNALYLLEPELKRREITPQLEMPSAPVTVLAEPVALEQIIHNLLMNALQALEQVPATER
RLGVTLAEADRQGVVTISDCGPGMAADVLPRIFEPFFTTRDAGLGLGLSLCETLATGMGGSLTAAHNLPRGAVFRLSLPL
ADTP

Sequences:

>Translated_484_residues
MLQLRQRWLVWAVLWCAITALGCVALVRLELAQLRENFETDARIAHRLLSQRVVQHDAVLATLALLQPAADASRPEQRLP
SVYPQIIGVHRQDRDAVWPNERLRNAAPLSRALRRPVLAEADLARGRYQLVLAADPTSYALQLDLRAVVPWSEWPMAPDT
SPVRVTLEHEGQIFVLQPGHLREGGWRFEFHKHLAAESQPFDVFALRQVGWGELPWGWMLAWALLVAAVLAAWQALLRQR
AERQRAEELLRLGQVGRLNTLGELAAGMAHELNQPLTAVLANTQAAGRLLNDEPPELASARAAMAQAVEQARRASEVVGR
LRRAVERPGLAAQPVVLQGAVRNALYLLEPELKRREITPQLEMPSAPVTVLAEPVALEQIIHNLLMNALQALEQVPATER
RLGVTLAEADRQGVVTISDCGPGMAADVLPRIFEPFFTTRDAGLGLGLSLCETLATGMGGSLTAAHNLPRGAVFRLSLPL
ADTP
>Mature_484_residues
MLQLRQRWLVWAVLWCAITALGCVALVRLELAQLRENFETDARIAHRLLSQRVVQHDAVLATLALLQPAADASRPEQRLP
SVYPQIIGVHRQDRDAVWPNERLRNAAPLSRALRRPVLAEADLARGRYQLVLAADPTSYALQLDLRAVVPWSEWPMAPDT
SPVRVTLEHEGQIFVLQPGHLREGGWRFEFHKHLAAESQPFDVFALRQVGWGELPWGWMLAWALLVAAVLAAWQALLRQR
AERQRAEELLRLGQVGRLNTLGELAAGMAHELNQPLTAVLANTQAAGRLLNDEPPELASARAAMAQAVEQARRASEVVGR
LRRAVERPGLAAQPVVLQGAVRNALYLLEPELKRREITPQLEMPSAPVTVLAEPVALEQIIHNLLMNALQALEQVPATER
RLGVTLAEADRQGVVTISDCGPGMAADVLPRIFEPFFTTRDAGLGLGLSLCETLATGMGGSLTAAHNLPRGAVFRLSLPL
ADTP

Specific function: Member of the two-component regulatory system nodV/nodW probably involved in the regulation of the transcription of genes involved in the nodulation process. NodV may function as a membrane-associated protein kinase that phosphorylates nodW in response to

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1790436, Length=266, Percent_Identity=30.4511278195489, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1788549, Length=247, Percent_Identity=31.1740890688259, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI87081816, Length=227, Percent_Identity=27.3127753303965, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 53260; Mature: 53260

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQLRQRWLVWAVLWCAITALGCVALVRLELAQLRENFETDARIAHRLLSQRVVQHDAVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ATLALLQPAADASRPEQRLPSVYPQIIGVHRQDRDAVWPNERLRNAAPLSRALRRPVLAE
HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHCCCHHH
ADLARGRYQLVLAADPTSYALQLDLRAVVPWSEWPMAPDTSPVRVTLEHEGQIFVLQPGH
HHHCCCCEEEEEEECCCCEEEEEEEEEECCCHHCCCCCCCCCEEEEEECCCEEEEECCCC
LREGGWRFEFHKHLAAESQPFDVFALRQVGWGELPWGWMLAWALLVAAVLAAWQALLRQR
CCCCCEEHHHHHHHHCCCCCCCEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AERQRAEELLRLGQVGRLNTLGELAAGMAHELNQPLTAVLANTQAAGRLLNDEPPELASA
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCHHHCCCCCCCCHHHHHH
RAAMAQAVEQARRASEVVGRLRRAVERPGLAAQPVVLQGAVRNALYLLEPELKRREITPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCC
LEMPSAPVTVLAEPVALEQIIHNLLMNALQALEQVPATERRLGVTLAEADRQGVVTISDC
CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEECCCCCCCEEEECC
GPGMAADVLPRIFEPFFTTRDAGLGLGLSLCETLATGMGGSLTAAHNLPRGAVFRLSLPL
CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEECCC
ADTP
CCCC
>Mature Secondary Structure
MLQLRQRWLVWAVLWCAITALGCVALVRLELAQLRENFETDARIAHRLLSQRVVQHDAVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ATLALLQPAADASRPEQRLPSVYPQIIGVHRQDRDAVWPNERLRNAAPLSRALRRPVLAE
HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHCCCHHH
ADLARGRYQLVLAADPTSYALQLDLRAVVPWSEWPMAPDTSPVRVTLEHEGQIFVLQPGH
HHHCCCCEEEEEEECCCCEEEEEEEEEECCCHHCCCCCCCCCEEEEEECCCEEEEECCCC
LREGGWRFEFHKHLAAESQPFDVFALRQVGWGELPWGWMLAWALLVAAVLAAWQALLRQR
CCCCCEEHHHHHHHHCCCCCCCEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AERQRAEELLRLGQVGRLNTLGELAAGMAHELNQPLTAVLANTQAAGRLLNDEPPELASA
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCHHHCCCCCCCCHHHHHH
RAAMAQAVEQARRASEVVGRLRRAVERPGLAAQPVVLQGAVRNALYLLEPELKRREITPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCC
LEMPSAPVTVLAEPVALEQIIHNLLMNALQALEQVPATERRLGVTLAEADRQGVVTISDC
CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEECCCCCCCEEEECC
GPGMAADVLPRIFEPFFTTRDAGLGLGLSLCETLATGMGGSLTAAHNLPRGAVFRLSLPL
CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEECCC
ADTP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2320582; 11157954; 12597275 [H]