Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789929

Identifier: 91789929

GI number: 91789929

Start: 4299195

End: 4299800

Strand: Direct

Name: 91789929

Synonym: Bpro_4090

Alternate gene names: NA

Gene position: 4299195-4299800 (Clockwise)

Preceding gene: 91789928

Following gene: 91789930

Centisome position: 82.67

GC content: 62.05

Gene sequence:

>606_bases
ATGAAACGAGCATTTTTAGCTGCTATTTCAATAGCATTTCTCGCGTTCCTCATGGGAGGCTGCTCGACCACGCGCCTGGT
CGACAGCGACGTCACGGCTTTTCCCAAATGGACCGCTGCGCCGCCTGGTCCCGGCACCGCTTACCGGTTTGAACGTCTGC
CCTCGCAGCAGGCCGCCGGGGCACAGCAGGACCGCATTGAAGCATTGGCCCGCACCGCCCTGTCCCGGGTGGGCATGGAA
CTGAGCCCCACGGTGGCGCGCTACGGCGTGCAGGTAGTGCTCAATACCCAGGTCATCGACCGCGGGCCCTATGACGACTT
CGGCTTTGCGACCCCGGGAGTCTTTATGGCTGGCGGCAGCCGTGGCGCTTCCGTTGGCTTTTCATTTCCGATGCGTTTTC
CGGAGCCGCCTTATTTCAGGCGCGAACTGGTCATCCTGATGCGCGACCTGACAACCCAGCAAGTGGTCTTTGAAACCCGC
GCATTGCACGATGGCGTATGGAGCGATTCCCTCAGCGTGCTGCCGGCGATGCTGGACGCCGCACTGCGCGGCTTTCCCGA
ACCGCCGCCGGGCAGACGCCACATCAATGTTGAAATCCCCCGATAA

Upstream 100 bases:

>100_bases
GCGGAAGAGTTCAGCGAGCCGCAGCGACCCGGCCTTTCCGTGATTGACATCGCATCGCGCTGAGCAACAAAATATTCAGA
AAAGTTAGCCTGCAGCCCTT

Downstream 100 bases:

>100_bases
AATGCGGCCCCCACGTTCGCTCACTGCGTGTAGCTCTCTGCCCCCCGAGGGGGCCGCTGCGCCTGCGGTCTGGCAAAGCC
AGTCCCGCGGCCCCTGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MKRAFLAAISIAFLAFLMGGCSTTRLVDSDVTAFPKWTAAPPGPGTAYRFERLPSQQAAGAQQDRIEALARTALSRVGME
LSPTVARYGVQVVLNTQVIDRGPYDDFGFATPGVFMAGGSRGASVGFSFPMRFPEPPYFRRELVILMRDLTTQQVVFETR
ALHDGVWSDSLSVLPAMLDAALRGFPEPPPGRRHINVEIPR

Sequences:

>Translated_201_residues
MKRAFLAAISIAFLAFLMGGCSTTRLVDSDVTAFPKWTAAPPGPGTAYRFERLPSQQAAGAQQDRIEALARTALSRVGME
LSPTVARYGVQVVLNTQVIDRGPYDDFGFATPGVFMAGGSRGASVGFSFPMRFPEPPYFRRELVILMRDLTTQQVVFETR
ALHDGVWSDSLSVLPAMLDAALRGFPEPPPGRRHINVEIPR
>Mature_201_residues
MKRAFLAAISIAFLAFLMGGCSTTRLVDSDVTAFPKWTAAPPGPGTAYRFERLPSQQAAGAQQDRIEALARTALSRVGME
LSPTVARYGVQVVLNTQVIDRGPYDDFGFATPGVFMAGGSRGASVGFSFPMRFPEPPYFRRELVILMRDLTTQQVVFETR
ALHDGVWSDSLSVLPAMLDAALRGFPEPPPGRRHINVEIPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21974; Mature: 21974

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAFLAAISIAFLAFLMGGCSTTRLVDSDVTAFPKWTAAPPGPGTAYRFERLPSQQAAG
CCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHCC
AQQDRIEALARTALSRVGMELSPTVARYGVQVVLNTQVIDRGPYDDFGFATPGVFMAGGS
CHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEEEEEEECCCCCCCCCCCCCCEEEECCC
RGASVGFSFPMRFPEPPYFRRELVILMRDLTTQQVVFETRALHDGVWSDSLSVLPAMLDA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ALRGFPEPPPGRRHINVEIPR
HHHCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MKRAFLAAISIAFLAFLMGGCSTTRLVDSDVTAFPKWTAAPPGPGTAYRFERLPSQQAAG
CCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHCC
AQQDRIEALARTALSRVGMELSPTVARYGVQVVLNTQVIDRGPYDDFGFATPGVFMAGGS
CHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEEEEEEECCCCCCCCCCCCCCEEEECCC
RGASVGFSFPMRFPEPPYFRRELVILMRDLTTQQVVFETRALHDGVWSDSLSVLPAMLDA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ALRGFPEPPPGRRHINVEIPR
HHHCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA