Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is solR [H]

Identifier: 91789884

GI number: 91789884

Start: 4246278

End: 4246904

Strand: Reverse

Name: solR [H]

Synonym: Bpro_4045

Alternate gene names: 91789884

Gene position: 4246904-4246278 (Counterclockwise)

Preceding gene: 91789887

Following gene: 91789883

Centisome position: 81.67

GC content: 66.67

Gene sequence:

>627_bases
GTGATCAGCGACTGGCTGTGTGCCCTGCGCGAGTTTTCGGTGGAAGCCCTGATGGTGCTGGGCCCGGATCCCTTTGGCGG
CCAGGAGGACCGGCTGGTACTGGCCTTGCACCCGCCGCGCCTGCTGGATGCGGCCGAGGCGCTGGCGGAGAGCCGGGACT
TCGGCGCCCCATGGCGTGATTCGGATGCCCCGCTCGTGGCCTGGCAGGATATTTCAAGGTCCGCCTTCGAAAACCTGGGC
CGCTGGCGCAGGCTCTGGCTGGGCCACGGCTACCAGAGCGTCGTGCGCATCGCGTTTCCGCTGACCGTGGGGCGCGCCTT
CGAATGCTATCTTTTCAGCCCGCGCCAGTGGCATGACCGCAGCGAGGCGGCGCTGCTGGCCTGGTCGGCACTCAATATCT
GGCCCTTGCTCAAGCGCGTCCTGGCCGAAGCGCGCAGCCCGCTGAGCCCGCGCGAGCTGGAATGCCTGAGCCTGGCTTTT
CAGGGCAGGACGGCGCGCGAAAGCGGCGACATCCTCGTTTGCAGCGAGCGCACCGTGAACTTTCACCTCTCCAATGCCAT
GGCCAAGCTCAAGGTCGACAACAAGCTGGCGGCCATTCAGCGCGCCTGCTGGTTTGGCCTGATCTGA

Upstream 100 bases:

>100_bases
GACCAGGAATGCGTTTGGCATTTGCCTGTATTGTCCCTGTTTTGTTTTAGGCGAGCGAATGCAACTACCTGCTAACTTTG
ACAGTGTCAGCCTGGACGGT

Downstream 100 bases:

>100_bases
GAGGCTGAGAATCTTTTGTTCATACCCGCTTATCACGCCAAAACGCACCCACTCGTTGTTGCAAATGCGCGCCATAGCCC
GAGCTATGGCTGTGCTTTGC

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MISDWLCALREFSVEALMVLGPDPFGGQEDRLVLALHPPRLLDAAEALAESRDFGAPWRDSDAPLVAWQDISRSAFENLG
RWRRLWLGHGYQSVVRIAFPLTVGRAFECYLFSPRQWHDRSEAALLAWSALNIWPLLKRVLAEARSPLSPRELECLSLAF
QGRTARESGDILVCSERTVNFHLSNAMAKLKVDNKLAAIQRACWFGLI

Sequences:

>Translated_208_residues
MISDWLCALREFSVEALMVLGPDPFGGQEDRLVLALHPPRLLDAAEALAESRDFGAPWRDSDAPLVAWQDISRSAFENLG
RWRRLWLGHGYQSVVRIAFPLTVGRAFECYLFSPRQWHDRSEAALLAWSALNIWPLLKRVLAEARSPLSPRELECLSLAF
QGRTARESGDILVCSERTVNFHLSNAMAKLKVDNKLAAIQRACWFGLI
>Mature_208_residues
MISDWLCALREFSVEALMVLGPDPFGGQEDRLVLALHPPRLLDAAEALAESRDFGAPWRDSDAPLVAWQDISRSAFENLG
RWRRLWLGHGYQSVVRIAFPLTVGRAFECYLFSPRQWHDRSEAALLAWSALNIWPLLKRVLAEARSPLSPRELECLSLAF
QGRTARESGDILVCSERTVNFHLSNAMAKLKVDNKLAAIQRACWFGLI

Specific function: Unknown

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 23501; Mature: 23501

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISDWLCALREFSVEALMVLGPDPFGGQEDRLVLALHPPRLLDAAEALAESRDFGAPWRD
CCCHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCC
SDAPLVAWQDISRSAFENLGRWRRLWLGHGYQSVVRIAFPLTVGRAFECYLFSPRQWHDR
CCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCHHHCCC
SEAALLAWSALNIWPLLKRVLAEARSPLSPRELECLSLAFQGRTARESGDILVCSERTVN
CCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCEEE
FHLSNAMAKLKVDNKLAAIQRACWFGLI
EEECCCEEEEEECHHHHHHHHHHHHCCC
>Mature Secondary Structure
MISDWLCALREFSVEALMVLGPDPFGGQEDRLVLALHPPRLLDAAEALAESRDFGAPWRD
CCCHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCC
SDAPLVAWQDISRSAFENLGRWRRLWLGHGYQSVVRIAFPLTVGRAFECYLFSPRQWHDR
CCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCHHHCCC
SEAALLAWSALNIWPLLKRVLAEARSPLSPRELECLSLAFQGRTARESGDILVCSERTVN
CCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCEEE
FHLSNAMAKLKVDNKLAAIQRACWFGLI
EEECCCEEEEEECHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371457 [H]