| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789880
Identifier: 91789880
GI number: 91789880
Start: 4242069
End: 4242323
Strand: Reverse
Name: 91789880
Synonym: Bpro_4041
Alternate gene names: NA
Gene position: 4242323-4242069 (Counterclockwise)
Preceding gene: 91789883
Following gene: 91789871
Centisome position: 81.58
GC content: 59.61
Gene sequence:
>255_bases ATGTCAGATCTGAAAGCCGCCTTTGAGAAGGCCATGGCCGATTCGAAAAACCTCAGCGAACGTCCCGACAACGCCACACT GCTGAAAATCTACGCCCTCTACAAGCAGGGCAGCACGGGCGACAACACCGAGAAGAAGCCCGGCTTCGGCGACATGGTGG CCCGCGCCAAGTGGGACGCGTGGAACAGCCTCAAGGGCACCTCACAGGATGACGCGATGCAGCAGTACATCGACCTGATT GCCGAGCTGGGCTGA
Upstream 100 bases:
>100_bases GGGCAATCCCCTATTTTGCAGGCAAGCGGGTGGCTAAGATACCGGGCAGTTACCCCAAGCATCATCATTGGTGCACCACT TCTAAAAACGGAGCGCACGC
Downstream 100 bases:
>100_bases GCCCAATACGGTTCAGTGAGCACGCCGCGCGCAGTGCCGATCATCTCCTTCCCCCGCTGGGGGGAAGGCCGGGATGGGGG CTCACGGCGTGGGCGTCGGG
Product: acyl-CoA-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSDLKAAFEKAMADSKNLSERPDNATLLKIYALYKQGSTGDNTEKKPGFGDMVARAKWDAWNSLKGTSQDDAMQQYIDLI AELG
Sequences:
>Translated_84_residues MSDLKAAFEKAMADSKNLSERPDNATLLKIYALYKQGSTGDNTEKKPGFGDMVARAKWDAWNSLKGTSQDDAMQQYIDLI AELG >Mature_83_residues SDLKAAFEKAMADSKNLSERPDNATLLKIYALYKQGSTGDNTEKKPGFGDMVARAKWDAWNSLKGTSQDDAMQQYIDLIA ELG
Specific function: Unknown
COG id: COG4281
COG function: function code I; Acyl-CoA-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI120433590, Length=79, Percent_Identity=46.8354430379747, Blast_Score=84, Evalue=3e-17, Organism=Homo sapiens, GI120433593, Length=78, Percent_Identity=47.4358974358974, Blast_Score=83, Evalue=4e-17, Organism=Homo sapiens, GI295842534, Length=68, Percent_Identity=47.0588235294118, Blast_Score=75, Evalue=1e-14, Organism=Homo sapiens, GI295842514, Length=68, Percent_Identity=47.0588235294118, Blast_Score=75, Evalue=1e-14, Organism=Homo sapiens, GI295849266, Length=68, Percent_Identity=47.0588235294118, Blast_Score=75, Evalue=1e-14, Organism=Homo sapiens, GI295849279, Length=68, Percent_Identity=47.0588235294118, Blast_Score=74, Evalue=3e-14, Organism=Homo sapiens, GI10140853, Length=68, Percent_Identity=47.0588235294118, Blast_Score=74, Evalue=3e-14, Organism=Homo sapiens, GI260274832, Length=71, Percent_Identity=45.0704225352113, Blast_Score=69, Evalue=6e-13, Organism=Homo sapiens, GI45643119, Length=71, Percent_Identity=45.0704225352113, Blast_Score=69, Evalue=7e-13, Organism=Homo sapiens, GI260275230, Length=71, Percent_Identity=45.0704225352113, Blast_Score=69, Evalue=7e-13, Organism=Homo sapiens, GI89886362, Length=80, Percent_Identity=43.75, Blast_Score=69, Evalue=1e-12, Organism=Homo sapiens, GI209364594, Length=79, Percent_Identity=40.5063291139241, Blast_Score=67, Evalue=4e-12, Organism=Homo sapiens, GI209364589, Length=79, Percent_Identity=40.5063291139241, Blast_Score=67, Evalue=4e-12, Organism=Homo sapiens, GI209364600, Length=79, Percent_Identity=40.5063291139241, Blast_Score=66, Evalue=5e-12, Organism=Homo sapiens, GI209364592, Length=79, Percent_Identity=40.5063291139241, Blast_Score=65, Evalue=2e-11, Organism=Homo sapiens, GI13376029, Length=79, Percent_Identity=40.5063291139241, Blast_Score=65, Evalue=2e-11, Organism=Homo sapiens, GI109689720, Length=80, Percent_Identity=36.25, Blast_Score=62, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17535521, Length=79, Percent_Identity=49.3670886075949, Blast_Score=82, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17506027, Length=77, Percent_Identity=49.3506493506493, Blast_Score=82, Evalue=8e-17, Organism=Saccharomyces cerevisiae, GI6321474, Length=76, Percent_Identity=46.0526315789474, Blast_Score=75, Evalue=1e-15, Organism=Drosophila melanogaster, GI24582714, Length=88, Percent_Identity=46.5909090909091, Blast_Score=74, Evalue=1e-14, Organism=Drosophila melanogaster, GI24659809, Length=76, Percent_Identity=44.7368421052632, Blast_Score=74, Evalue=2e-14, Organism=Drosophila melanogaster, GI24659814, Length=76, Percent_Identity=44.7368421052632, Blast_Score=74, Evalue=2e-14, Organism=Drosophila melanogaster, GI19920606, Length=69, Percent_Identity=40.5797101449275, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI21357027, Length=74, Percent_Identity=37.8378378378378, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9275; Mature: 9144
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLKAAFEKAMADSKNLSERPDNATLLKIYALYKQGSTGDNTEKKPGFGDMVARAKWDA CCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCC WNSLKGTSQDDAMQQYIDLIAELG CCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SDLKAAFEKAMADSKNLSERPDNATLLKIYALYKQGSTGDNTEKKPGFGDMVARAKWDA CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCC WNSLKGTSQDDAMQQYIDLIAELG CCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA