| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is cicA [H]
Identifier: 91789867
GI number: 91789867
Start: 4227013
End: 4227666
Strand: Reverse
Name: cicA [H]
Synonym: Bpro_4027
Alternate gene names: 91789867
Gene position: 4227666-4227013 (Counterclockwise)
Preceding gene: 91789868
Following gene: 91789863
Centisome position: 81.3
GC content: 69.11
Gene sequence:
>654_bases ATGTCCGAGGTAGCCGGCCCCGTTGTCGCCGCGTTTGACTTCGACGGCACGCTGACCCGGCGTGACACCCTGCTGCCGTT TCTTGCCCGTGGCCTGGGCTGGCCGGGGTTTTTACGGGCCCTGCTGCTGAGCGGCCCGTGGATGGCCGGTTATGCGTTGA AGCTGGTACGCAATGACGTGGCCAAGGCGCGCCTCCTCAAAATGGCGCTGGCCGGGCGCAGCAGTGCCGAGGTGGCGCAC TGGGCGGCTGACTGGGCCGGGCGCGACTTGCCGCGCCAGCTGCAGGACTGGGCCCTGGCGCGTCTGGCGCAGCACCGGCA GGCCGGGCACTGCTGCGTGATCGTCAGTGCCTCGCCCGATATTTACCTGCAGCACGCGGCCCGGCAACTGGGTTTTGACG CGCTGATCTGTACCGGCCTGGAGGTGGTGGATGGCCGCCTGACCGGACGCATGAGCACCGCCAATTGCCACGGCGAGGAA AAGGTGCGCCGGCTCAAGGCGTGGCTGCCGGAACGCTTTGGCGCGGACGCTGCCAGCCAGGTCACGCTCTATGCTTACGG CGACACGGCCGGGGACATGCCCATGTTGCGGCTGGCCCGGCACGCGTGGTACCGGGGGGAGCCCTGGCGTGATGTGCCGT CGCGGGGTGAATGA
Upstream 100 bases:
>100_bases AAGGGATGCTGGGGACTATTTTCAAGCGCTACTACAACATACCCTCCGCATTGCCGATGACCGGGTGCCCGTTTTGCGAA CGCTATTGCGGGAAGGTGCG
Downstream 100 bases:
>100_bases GCCTTTCCGTTCTTGGGGTTTAGGTATCGTTAGCTATTGAATTGATAGCGTGCTGGATTTTCTGAGAGCGGCTGGCCGGG TCTCGCCCCGGCGGGCGATT
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSEVAGPVVAAFDFDGTLTRRDTLLPFLARGLGWPGFLRALLLSGPWMAGYALKLVRNDVAKARLLKMALAGRSSAEVAH WAADWAGRDLPRQLQDWALARLAQHRQAGHCCVIVSASPDIYLQHAARQLGFDALICTGLEVVDGRLTGRMSTANCHGEE KVRRLKAWLPERFGADAASQVTLYAYGDTAGDMPMLRLARHAWYRGEPWRDVPSRGE
Sequences:
>Translated_217_residues MSEVAGPVVAAFDFDGTLTRRDTLLPFLARGLGWPGFLRALLLSGPWMAGYALKLVRNDVAKARLLKMALAGRSSAEVAH WAADWAGRDLPRQLQDWALARLAQHRQAGHCCVIVSASPDIYLQHAARQLGFDALICTGLEVVDGRLTGRMSTANCHGEE KVRRLKAWLPERFGADAASQVTLYAYGDTAGDMPMLRLARHAWYRGEPWRDVPSRGE >Mature_216_residues SEVAGPVVAAFDFDGTLTRRDTLLPFLARGLGWPGFLRALLLSGPWMAGYALKLVRNDVAKARLLKMALAGRSSAEVAHW AADWAGRDLPRQLQDWALARLAQHRQAGHCCVIVSASPDIYLQHAARQLGFDALICTGLEVVDGRLTGRMSTANCHGEEK VRRLKAWLPERFGADAASQVTLYAYGDTAGDMPMLRLARHAWYRGEPWRDVPSRGE
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 23923; Mature: 23792
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVAGPVVAAFDFDGTLTRRDTLLPFLARGLGWPGFLRALLLSGPWMAGYALKLVRNDV CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHH AKARLLKMALAGRSSAEVAHWAADWAGRDLPRQLQDWALARLAQHRQAGHCCVIVSASPD HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCC IYLQHAARQLGFDALICTGLEVVDGRLTGRMSTANCHGEEKVRRLKAWLPERFGADAASQ HHHHHHHHHHCCHHHHHHCHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCE VTLYAYGDTAGDMPMLRLARHAWYRGEPWRDVPSRGE EEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SEVAGPVVAAFDFDGTLTRRDTLLPFLARGLGWPGFLRALLLSGPWMAGYALKLVRNDV CCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHH AKARLLKMALAGRSSAEVAHWAADWAGRDLPRQLQDWALARLAQHRQAGHCCVIVSASPD HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCC IYLQHAARQLGFDALICTGLEVVDGRLTGRMSTANCHGEEKVRRLKAWLPERFGADAASQ HHHHHHHHHHCCHHHHHHCHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCE VTLYAYGDTAGDMPMLRLARHAWYRGEPWRDVPSRGE EEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11169108 [H]