| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789844
Identifier: 91789844
GI number: 91789844
Start: 4202601
End: 4203584
Strand: Direct
Name: 91789844
Synonym: Bpro_4004
Alternate gene names: NA
Gene position: 4202601-4203584 (Clockwise)
Preceding gene: 91789843
Following gene: 91789845
Centisome position: 80.82
GC content: 49.39
Gene sequence:
>984_bases ATGAAAATTTTCATTGATTCACTACTTCAACGACTTAAACGAGCACTTCGTGGCCGGCGGGCTGATCTGCCTGCCTTGGT AGTTACAACTGAAGAACGCTCCAGGACAATTGAGTCTCTTTTGCATACCGTTGAAGAACGCACTAGGACGTTGGAATATG TCGCACGACAGTCCATGTTTACCGTGAATCATCAAATCGATTTTCTTCAGAGGCTATATGTCGAGTCGATGCCTCGTCTG CTGAATTTAAATAATCGGCCCGCTTTTAATGCTGCTGGCATTCTCGAGTTAAAAACGGACTACCCGATTGCTTTGAGCAG TAACGACCATATAAATCCTGACTCGACAACCGAAGGAGTGTCCCGGCCAACGCTCTTCGTCCAAAACTGCATTGACGTAT TGGGTAGCAATATCAAGAGCCTGGATCTTGGCACCGGGGCGGCCGGGCTGGTGTTTGAGTTTGCGATGAATGACGTGTTG GCTGTTGGCGTGGATGGATCAGATTTTTGCCGCACAAATCGGATCGGTTACTGGCCACTTCTGCCACACAACCTGTTTAC CTGCGATATTACCAAGCCGTTCAGCTTTGTGTCGCGAGATACTCAAGCGGTGACTAACTTCGATGTCATCACGATGTGGG AGGTGCTGGAACACATTGCCGAGCAGGACCTTGCCGGTCTGCTCGTAAATATTGGGCGTCATTTGAATGAGCGTGGCTAT TTTATTGGGTCCATCTCGCTCTTGGAGTACGTGGACAGCACCGGTAGCCCATACCATGTGACGCTCAAACCACGGGACTG GTGGAAGGCGAAGTTTATTGAGAGCGGCCTCGTTATGCTCGAAACCCACCCCTTCAATGAAAAATTGTTCTGTCGGGGAA ACGGCCCGCGCTTTCAGGACTTCCATAACTACGCCCTAAATCCGAATGAGGGTTTCTTGTTCGTTGCGCAAAAGAGATCC GATAATGAACGGTTATCGGCTTGA
Upstream 100 bases:
>100_bases TGATTTAGGTTTAAGGTCAAGCGTGGAACTGGGAAGTAGCACTTCAACGGTTGAGCCACATCAACCCATAACGCCTTCTG CCTCCTGATAGCTGATTTAT
Downstream 100 bases:
>100_bases GAAAAACGGCTTTACTCGAAAAATACACTGCCTTATGAACATAACCGCACGCTTTGTCTTGGTTGGCGTTGTTGGTGCCA TAGTCGAGTTAACCCTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MKIFIDSLLQRLKRALRGRRADLPALVVTTEERSRTIESLLHTVEERTRTLEYVARQSMFTVNHQIDFLQRLYVESMPRL LNLNNRPAFNAAGILELKTDYPIALSSNDHINPDSTTEGVSRPTLFVQNCIDVLGSNIKSLDLGTGAAGLVFEFAMNDVL AVGVDGSDFCRTNRIGYWPLLPHNLFTCDITKPFSFVSRDTQAVTNFDVITMWEVLEHIAEQDLAGLLVNIGRHLNERGY FIGSISLLEYVDSTGSPYHVTLKPRDWWKAKFIESGLVMLETHPFNEKLFCRGNGPRFQDFHNYALNPNEGFLFVAQKRS DNERLSA
Sequences:
>Translated_327_residues MKIFIDSLLQRLKRALRGRRADLPALVVTTEERSRTIESLLHTVEERTRTLEYVARQSMFTVNHQIDFLQRLYVESMPRL LNLNNRPAFNAAGILELKTDYPIALSSNDHINPDSTTEGVSRPTLFVQNCIDVLGSNIKSLDLGTGAAGLVFEFAMNDVL AVGVDGSDFCRTNRIGYWPLLPHNLFTCDITKPFSFVSRDTQAVTNFDVITMWEVLEHIAEQDLAGLLVNIGRHLNERGY FIGSISLLEYVDSTGSPYHVTLKPRDWWKAKFIESGLVMLETHPFNEKLFCRGNGPRFQDFHNYALNPNEGFLFVAQKRS DNERLSA >Mature_327_residues MKIFIDSLLQRLKRALRGRRADLPALVVTTEERSRTIESLLHTVEERTRTLEYVARQSMFTVNHQIDFLQRLYVESMPRL LNLNNRPAFNAAGILELKTDYPIALSSNDHINPDSTTEGVSRPTLFVQNCIDVLGSNIKSLDLGTGAAGLVFEFAMNDVL AVGVDGSDFCRTNRIGYWPLLPHNLFTCDITKPFSFVSRDTQAVTNFDVITMWEVLEHIAEQDLAGLLVNIGRHLNERGY FIGSISLLEYVDSTGSPYHVTLKPRDWWKAKFIESGLVMLETHPFNEKLFCRGNGPRFQDFHNYALNPNEGFLFVAQKRS DNERLSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37172; Mature: 37172
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFIDSLLQRLKRALRGRRADLPALVVTTEERSRTIESLLHTVEERTRTLEYVARQSMF CEEHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHE TVNHQIDFLQRLYVESMPRLLNLNNRPAFNAAGILELKTDYPIALSSNDHINPDSTTEGV EEHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCC SRPTLFVQNCIDVLGSNIKSLDLGTGAAGLVFEFAMNDVLAVGVDGSDFCRTNRIGYWPL CCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCEEEEECCCHHHHHCCCCCCCCC LPHNLFTCDITKPFSFVSRDTQAVTNFDVITMWEVLEHIAEQDLAGLLVNIGRHLNERGY CCCCEEEEECCCCHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE FIGSISLLEYVDSTGSPYHVTLKPRDWWKAKFIESGLVMLETHPFNEKLFCRGNGPRFQD EEEHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCEEEEEECCCCCEEEECCCCCCCHH FHNYALNPNEGFLFVAQKRSDNERLSA HHCCCCCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MKIFIDSLLQRLKRALRGRRADLPALVVTTEERSRTIESLLHTVEERTRTLEYVARQSMF CEEHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHE TVNHQIDFLQRLYVESMPRLLNLNNRPAFNAAGILELKTDYPIALSSNDHINPDSTTEGV EEHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCC SRPTLFVQNCIDVLGSNIKSLDLGTGAAGLVFEFAMNDVLAVGVDGSDFCRTNRIGYWPL CCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCEEEEECCCHHHHHCCCCCCCCC LPHNLFTCDITKPFSFVSRDTQAVTNFDVITMWEVLEHIAEQDLAGLLVNIGRHLNERGY CCCCEEEEECCCCHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE FIGSISLLEYVDSTGSPYHVTLKPRDWWKAKFIESGLVMLETHPFNEKLFCRGNGPRFQD EEEHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCEEEEEECCCCCEEEECCCCCCCHH FHNYALNPNEGFLFVAQKRSDNERLSA HHCCCCCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA