| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is uxuB [H]
Identifier: 91789810
GI number: 91789810
Start: 4162997
End: 4164418
Strand: Reverse
Name: uxuB [H]
Synonym: Bpro_3970
Alternate gene names: 91789810
Gene position: 4164418-4162997 (Counterclockwise)
Preceding gene: 91789811
Following gene: 91789802
Centisome position: 80.08
GC content: 68.14
Gene sequence:
>1422_bases ATGCAGCCATTGAACCAAGCCACACTGACGCAGTTGACGGACTCTGCGCTTGCCACACCATCGCCTGTTCAACTGCCGCG CTACCGCCGCACCGATGCCCGCGTGGGCGTGGTGCATCTGGGGCTGGGCGCTTTTCATCGCGCCCACCAGGCCATGGTGT TTGATGCCCTGTTGCAGCGCGGCGACCCGCGTTGGGGCGTGCTGGGCGTGGCCATGCGCACGACCGAACTGGCCGATGCG CTGACCGCGCAAGATGGGCTGTATGCGGTGCAGGTGGCCAGTCGCGAGGCGCTGCGCTGGCAGGTGGTCGGCTCGGTGTT GCAGGCCTGTGTGGCGGCGCGTGAGCCTGCGCAGGTGGTGGCGGCCATGGCCGCACCCGGCACGCGCTGGGTGACGCTGA CGGTGACCGAAAAAGGCTATGGCCCGGCGCTGGCGGCCTTGCTGGTGCAGGGGCTGGCGGCGCGCCGTGCAGCGGGTCTG GGCGGGCTGACGATCGCGTCCTGCGACAACCTCTCCGACAACGGCCGCAAGCTGCAGCAACTGTGTGTGGATGCGGCGCA GCACGATGCTGCGCTGGCGCAGTGGATTGACACCGCCTGCGCCTTCCCCAACAGCATGGTCGACCGCATTGTTCCGGCCG CCACCGCACAGCATCGCAGCGATGCGGCACAGGCGCTGGGACTGGCGGATGCCTGCGCCCTGGGCACCGAAGAATTTTGG GAGTGGGTGATCGAGCGCCGCTTTGTCGACGACGCGGATGGCGACGCGCTGGCGGCTGTCGGGGTCCAGGTGGTGGCAGA CGTCAAACCCTTTGAGGAGGCCAAGCTGCGCATGCTCAACGGCAGTCACACGGCCATCGCGTTGATCGGTGCGGTGCTGG GTGTGCCCACGGTGGCCGACTGCATTGCCCGGCCTGACATCCACCGTTTTGTTCGCAGCCTGATGACCGAGGTGGTGATG CCGCATCTGCAGCGTCCCGGGCTGCCCGCCTACCGCGATGCCTTGCTGGCGCGCTTTGCCAATCCCGAACTCCGGCACAA GGTGCACCAGATCGCCACTGACAGCTCGCTCAAGATTCCGCTGCGCTGGCAAGCGACGGTGCTGGCGCAACTGGCGGCGA ACGGCTCGATCGAGCCCCTGGCGCTGGCCGCGGCGGTGTGGATGCGCTACCTGCTGGGCGCCGATGAACAAGGCCAGGCT TATGCCATCTCGGACCCGCTGGGGCAGGCCTTGCAGGCCACCGCGCAGCGGCGCCGGGACGATGTGGCTGGCACGGTGCG TGCGCTGCTCGCTGTGAGCTCGATATGGGGCGAGGTGTTACCGCACGACGTACGCTGGACCGCGCGCGTGGAACACTGGT TGCAGGTCATTCGGCGCCAGGGTGTCGCCGCTGCGCTGGCGCAGCTGCATCCGTCAGACTGA
Upstream 100 bases:
>100_bases TGGCAGCCAGGGTTTCACCGACACTGGCGAGCGGCTGCCCATTGCCTTCGGCAGCTTTGCCGCCATCCGCACCGTCGATT TTCCATCCACCTGATCACCT
Downstream 100 bases:
>100_bases GTCCTTGCCGGGACTCGGCGCACGGGTTGCGCCGCACGCACCGCTGCGGCCTGTTCGCACCGCGGTCGGGGTGCGAACAG GCGCGGGCTCACTCAATCGA
Product: mannitol dehydrogenase-like protein
Products: NA
Alternate protein names: Fructuronate reductase [H]
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MQPLNQATLTQLTDSALATPSPVQLPRYRRTDARVGVVHLGLGAFHRAHQAMVFDALLQRGDPRWGVLGVAMRTTELADA LTAQDGLYAVQVASREALRWQVVGSVLQACVAAREPAQVVAAMAAPGTRWVTLTVTEKGYGPALAALLVQGLAARRAAGL GGLTIASCDNLSDNGRKLQQLCVDAAQHDAALAQWIDTACAFPNSMVDRIVPAATAQHRSDAAQALGLADACALGTEEFW EWVIERRFVDDADGDALAAVGVQVVADVKPFEEAKLRMLNGSHTAIALIGAVLGVPTVADCIARPDIHRFVRSLMTEVVM PHLQRPGLPAYRDALLARFANPELRHKVHQIATDSSLKIPLRWQATVLAQLAANGSIEPLALAAAVWMRYLLGADEQGQA YAISDPLGQALQATAQRRRDDVAGTVRALLAVSSIWGEVLPHDVRWTARVEHWLQVIRRQGVAAALAQLHPSD
Sequences:
>Translated_473_residues MQPLNQATLTQLTDSALATPSPVQLPRYRRTDARVGVVHLGLGAFHRAHQAMVFDALLQRGDPRWGVLGVAMRTTELADA LTAQDGLYAVQVASREALRWQVVGSVLQACVAAREPAQVVAAMAAPGTRWVTLTVTEKGYGPALAALLVQGLAARRAAGL GGLTIASCDNLSDNGRKLQQLCVDAAQHDAALAQWIDTACAFPNSMVDRIVPAATAQHRSDAAQALGLADACALGTEEFW EWVIERRFVDDADGDALAAVGVQVVADVKPFEEAKLRMLNGSHTAIALIGAVLGVPTVADCIARPDIHRFVRSLMTEVVM PHLQRPGLPAYRDALLARFANPELRHKVHQIATDSSLKIPLRWQATVLAQLAANGSIEPLALAAAVWMRYLLGADEQGQA YAISDPLGQALQATAQRRRDDVAGTVRALLAVSSIWGEVLPHDVRWTARVEHWLQVIRRQGVAAALAQLHPSD >Mature_473_residues MQPLNQATLTQLTDSALATPSPVQLPRYRRTDARVGVVHLGLGAFHRAHQAMVFDALLQRGDPRWGVLGVAMRTTELADA LTAQDGLYAVQVASREALRWQVVGSVLQACVAAREPAQVVAAMAAPGTRWVTLTVTEKGYGPALAALLVQGLAARRAAGL GGLTIASCDNLSDNGRKLQQLCVDAAQHDAALAQWIDTACAFPNSMVDRIVPAATAQHRSDAAQALGLADACALGTEEFW EWVIERRFVDDADGDALAAVGVQVVADVKPFEEAKLRMLNGSHTAIALIGAVLGVPTVADCIARPDIHRFVRSLMTEVVM PHLQRPGLPAYRDALLARFANPELRHKVHQIATDSSLKIPLRWQATVLAQLAANGSIEPLALAAAVWMRYLLGADEQGQA YAISDPLGQALQATAQRRRDDVAGTVRALLAVSSIWGEVLPHDVRWTARVEHWLQVIRRQGVAAALAQLHPSD
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family. UxuB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790779, Length=495, Percent_Identity=37.1717171717172, Blast_Score=271, Evalue=6e-74, Organism=Escherichia coli, GI1788497, Length=483, Percent_Identity=36.4389233954451, Blast_Score=268, Evalue=4e-73, Organism=Escherichia coli, GI1787823, Length=475, Percent_Identity=38.1052631578947, Blast_Score=268, Evalue=7e-73, Organism=Escherichia coli, GI48994885, Length=467, Percent_Identity=26.9807280513919, Blast_Score=129, Evalue=4e-31, Organism=Escherichia coli, GI1790028, Length=226, Percent_Identity=26.9911504424779, Blast_Score=71, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6324401, Length=504, Percent_Identity=32.1428571428571, Blast_Score=253, Evalue=4e-68, Organism=Saccharomyces cerevisiae, GI6320765, Length=504, Percent_Identity=32.1428571428571, Blast_Score=253, Evalue=4e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR000669 - InterPro: IPR013118 - InterPro: IPR023027 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: =1.1.1.57 [H]
Molecular weight: Translated: 50764; Mature: 50764
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPLNQATLTQLTDSALATPSPVQLPRYRRTDARVGVVHLGLGAFHRAHQAMVFDALLQR CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHC GDPRWGVLGVAMRTTELADALTAQDGLYAVQVASREALRWQVVGSVLQACVAAREPAQVV CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHH AAMAAPGTRWVTLTVTEKGYGPALAALLVQGLAARRAAGLGGLTIASCDNLSDNGRKLQQ HHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHH LCVDAAQHDAALAQWIDTACAFPNSMVDRIVPAATAQHRSDAAQALGLADACALGTEEFW HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH EWVIERRFVDDADGDALAAVGVQVVADVKPFEEAKLRMLNGSHTAIALIGAVLGVPTVAD HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHH CIARPDIHRFVRSLMTEVVMPHLQRPGLPAYRDALLARFANPELRHKVHQIATDSSLKIP HHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEE LRWQATVLAQLAANGSIEPLALAAAVWMRYLLGADEQGQAYAISDPLGQALQATAQRRRD EEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHH DVAGTVRALLAVSSIWGEVLPHDVRWTARVEHWLQVIRRQGVAAALAQLHPSD HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCC >Mature Secondary Structure MQPLNQATLTQLTDSALATPSPVQLPRYRRTDARVGVVHLGLGAFHRAHQAMVFDALLQR CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHC GDPRWGVLGVAMRTTELADALTAQDGLYAVQVASREALRWQVVGSVLQACVAAREPAQVV CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHH AAMAAPGTRWVTLTVTEKGYGPALAALLVQGLAARRAAGLGGLTIASCDNLSDNGRKLQQ HHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHH LCVDAAQHDAALAQWIDTACAFPNSMVDRIVPAATAQHRSDAAQALGLADACALGTEEFW HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH EWVIERRFVDDADGDALAAVGVQVVADVKPFEEAKLRMLNGSHTAIALIGAVLGVPTVAD HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHH CIARPDIHRFVRSLMTEVVMPHLQRPGLPAYRDALLARFANPELRHKVHQIATDSSLKIP HHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEE LRWQATVLAQLAANGSIEPLALAAAVWMRYLLGADEQGQAYAISDPLGQALQATAQRRRD EEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHH DVAGTVRALLAVSSIWGEVLPHDVRWTARVEHWLQVIRRQGVAAALAQLHPSD HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]