| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ychN [H]
Identifier: 91789776
GI number: 91789776
Start: 4126586
End: 4126936
Strand: Reverse
Name: ychN [H]
Synonym: Bpro_3936
Alternate gene names: 91789776
Gene position: 4126936-4126586 (Counterclockwise)
Preceding gene: 91789777
Following gene: 91789775
Centisome position: 79.36
GC content: 61.54
Gene sequence:
>351_bases ATGAACACATTGCTCATCCTGAACGACGCCCCTTACGGTAGTGAACGTACTTACAACGGGGCGCGCCTGGCCGGTGCACT GGCCAGGCAGCCAGGCAACGAGGTTCGCGTCTTCCTTATCGGTGACGCCGTACCCACTGCGCACCGTCTCCAGAAGGTAC CCACCGGCTTCTACAACCTTGAAGTGATGCTCGGTTCGGTGGTGAGCCACGCGGGCGTCATCGGCGTCTGCGGAACCTGC ATGGATGCACGCGGCATCAGCGTCGACGACCTCATCCAGGGCTCGCATCGCAGCAGCCTGGACGAACTCACCCAATGGAC TACCTGGGCCGACAAGGTCCTGGTGTTCTGA
Upstream 100 bases:
>100_bases GCTGCGCAAAAAAGGCTACCGCGCCTTCCACCTGACCGACGGTGTGGCCGAGTGGCGCGCCCGTGGCCTGCCTGTCGAGC AAGCAACGTGAGGCTTTCGC
Downstream 100 bases:
>100_bases TTCAGGATTCAGGAGACAGACATGTTCTTTAGACAACGAGCGGCGGAGAGCGCCACCCTCTCTTATTTCTTTGGATGCGC GAGCCTGGCAAAGGCGGTAG
Product: DsrE-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MNTLLILNDAPYGSERTYNGARLAGALARQPGNEVRVFLIGDAVPTAHRLQKVPTGFYNLEVMLGSVVSHAGVIGVCGTC MDARGISVDDLIQGSHRSSLDELTQWTTWADKVLVF
Sequences:
>Translated_116_residues MNTLLILNDAPYGSERTYNGARLAGALARQPGNEVRVFLIGDAVPTAHRLQKVPTGFYNLEVMLGSVVSHAGVIGVCGTC MDARGISVDDLIQGSHRSSLDELTQWTTWADKVLVF >Mature_116_residues MNTLLILNDAPYGSERTYNGARLAGALARQPGNEVRVFLIGDAVPTAHRLQKVPTGFYNLEVMLGSVVSHAGVIGVCGTC MDARGISVDDLIQGSHRSSLDELTQWTTWADKVLVF
Specific function: Unknown
COG id: COG1553
COG function: function code P; Uncharacterized conserved protein involved in intracellular sulfur reduction
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0989 [H]
Homologues:
Organism=Escherichia coli, GI1787471, Length=114, Percent_Identity=45.6140350877193, Blast_Score=91, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003787 [H]
Pfam domain/function: PF02635 DrsE [H]
EC number: NA
Molecular weight: Translated: 12516; Mature: 12516
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLLILNDAPYGSERTYNGARLAGALARQPGNEVRVFLIGDAVPTAHRLQKVPTGFYNL CCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHCCCCHHHH EVMLGSVVSHAGVIGVCGTCMDARGISVDDLIQGSHRSSLDELTQWTTWADKVLVF HHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCEEECC >Mature Secondary Structure MNTLLILNDAPYGSERTYNGARLAGALARQPGNEVRVFLIGDAVPTAHRLQKVPTGFYNL CCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHCCCCHHHH EVMLGSVVSHAGVIGVCGTCMDARGISVDDLIQGSHRSSLDELTQWTTWADKVLVF HHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]