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The map label for this gene is ybjT [H]

Identifier: 91789752

GI number: 91789752

Start: 4104925

End: 4105881

Strand: Direct

Name: ybjT [H]

Synonym: Bpro_3910

Alternate gene names: 91789752

Gene position: 4104925-4105881 (Clockwise)

Preceding gene: 91789750

Following gene: 91789753

Centisome position: 78.94

GC content: 66.98

Gene sequence:

>957_bases
ATGAAACAAGTTCTCATCCTCGGCGGCACCGGTTTTGTGGGCCGCCATGTCTGCGAGAAACTGGCCCAACTGCAATGCCG
CGTGACCGTGGCGACACGCCGGCTTGACAACGCCCGTCACCTCCAGACGCTGCCAATGCTCGACGTGATCGAAATCGATG
TGCATGACAGCGCAGCCCTGACATCCCTGCTGGCCGGGCATGACGCGGTGGTGAACCTGATCGCCATCCTGCACGGCACG
GAGGCCGCGTTTGAAAAGGCCCATGTGCAGTTGCCGCTGGCACTGGTGCGGGCCTGCGAGGCCGCTGGGTTACGGCGCAT
TGTTCACATCAGCGCGCTCGGCGCTTCTGTCAGCTCGGCATCGATGTACCAGCGCAGCAAGGCACGTGGCGAGGCGGTCC
TGCTCAGCGCCGGGCTGGATGTGACGCTGCTTCGCCCCAGCGTGATCTTTGGTGCCGAGGACAAATTCCTCAACACCTTT
GCCCGGCTGCAACAGCTGTTTCCGGTGGTCCCCCTGGCCGCCAGCCAGGCGCGCTTCCAGCCGGTCTGGGTGGAAGACGT
CGCCAGCGCCGTGGTGCACTGCCTGCAGGACAGCAGCTCGATTGGCCAGGTCTACGAAGCCTGCGGGCCCGACGTGTTCA
CGCTGCGGCAACTGGTGGAGCTGGCGGGCCGCTATGCCGGCGTCAATGGCGGAAAGGGCCGGCCGGTCATCGCACTGCCG
GCACCGCTGGGGCGCCTGCAGGCGCGCCTGATGGAATTGCTGCCCGGCGAGCCCCTGCTCAGCCGCGACAACCTGGACGC
CATGCAAACCGACAATGTGGCCAGCGGCAAGCTGCCCGGTCTGAAGGCGCTGGGCATCACGCCCGCCGCCCTGGGCGCCA
TTGCCCCGTCTTACCTTGGCGCGCAGGGCCTGCGCAGCGGCCTGACGGCCAAGCGCAAGACGGCCGGGCGGTTCTGA

Upstream 100 bases:

>100_bases
TTAATAGCTTAACTCCTCGAAAAAACGGTGTCAAAACCGTTTTTACGATAAAAATCATTTTTTTAAAGCAAAGTTGCCCA
AACGCGCTAAATTAAGGTCC

Downstream 100 bases:

>100_bases
GGCCCCCACGGTCGCTCACTGCGTGTAGCTCCCGAGGCCTTGCAGGCCGCGGCTCGCGAGACGCTTCGCCTCTGTCGCCT
GTCCAAAGCTGCTCAAGCAG

Product: NAD-dependent epimerase/dehydratase

Products: NAD+; ubiquinol

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MKQVLILGGTGFVGRHVCEKLAQLQCRVTVATRRLDNARHLQTLPMLDVIEIDVHDSAALTSLLAGHDAVVNLIAILHGT
EAAFEKAHVQLPLALVRACEAAGLRRIVHISALGASVSSASMYQRSKARGEAVLLSAGLDVTLLRPSVIFGAEDKFLNTF
ARLQQLFPVVPLAASQARFQPVWVEDVASAVVHCLQDSSSIGQVYEACGPDVFTLRQLVELAGRYAGVNGGKGRPVIALP
APLGRLQARLMELLPGEPLLSRDNLDAMQTDNVASGKLPGLKALGITPAALGAIAPSYLGAQGLRSGLTAKRKTAGRF

Sequences:

>Translated_318_residues
MKQVLILGGTGFVGRHVCEKLAQLQCRVTVATRRLDNARHLQTLPMLDVIEIDVHDSAALTSLLAGHDAVVNLIAILHGT
EAAFEKAHVQLPLALVRACEAAGLRRIVHISALGASVSSASMYQRSKARGEAVLLSAGLDVTLLRPSVIFGAEDKFLNTF
ARLQQLFPVVPLAASQARFQPVWVEDVASAVVHCLQDSSSIGQVYEACGPDVFTLRQLVELAGRYAGVNGGKGRPVIALP
APLGRLQARLMELLPGEPLLSRDNLDAMQTDNVASGKLPGLKALGITPAALGAIAPSYLGAQGLRSGLTAKRKTAGRF
>Mature_318_residues
MKQVLILGGTGFVGRHVCEKLAQLQCRVTVATRRLDNARHLQTLPMLDVIEIDVHDSAALTSLLAGHDAVVNLIAILHGT
EAAFEKAHVQLPLALVRACEAAGLRRIVHISALGASVSSASMYQRSKARGEAVLLSAGLDVTLLRPSVIFGAEDKFLNTF
ARLQQLFPVVPLAASQARFQPVWVEDVASAVVHCLQDSSSIGQVYEACGPDVFTLRQLVELAGRYAGVNGGKGRPVIALP
APLGRLQARLMELLPGEPLLSRDNLDAMQTDNVASGKLPGLKALGITPAALGAIAPSYLGAQGLRSGLTAKRKTAGRF

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=299, Percent_Identity=32.4414715719064, Blast_Score=150, Evalue=1e-36,
Organism=Escherichia coli, GI87081793, Length=258, Percent_Identity=24.8062015503876, Blast_Score=76, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17556106, Length=234, Percent_Identity=24.7863247863248, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24667554, Length=306, Percent_Identity=29.4117647058824, Blast_Score=112, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 33651; Mature: 33651

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQVLILGGTGFVGRHVCEKLAQLQCRVTVATRRLDNARHLQTLPMLDVIEIDVHDSAAL
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEECCCHHHH
TSLLAGHDAVVNLIAILHGTEAAFEKAHVQLPLALVRACEAAGLRRIVHISALGASVSSA
HHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
SMYQRSKARGEAVLLSAGLDVTLLRPSVIFGAEDKFLNTFARLQQLFPVVPLAASQARFQ
HHHHHHHCCCCEEEEECCCCEEEECCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PVWVEDVASAVVHCLQDSSSIGQVYEACGPDVFTLRQLVELAGRYAGVNGGKGRPVIALP
CCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
APLGRLQARLMELLPGEPLLSRDNLDAMQTDNVASGKLPGLKALGITPAALGAIAPSYLG
CCHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHC
AQGLRSGLTAKRKTAGRF
HHHHHHCCCHHHHHCCCC
>Mature Secondary Structure
MKQVLILGGTGFVGRHVCEKLAQLQCRVTVATRRLDNARHLQTLPMLDVIEIDVHDSAAL
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEECCCHHHH
TSLLAGHDAVVNLIAILHGTEAAFEKAHVQLPLALVRACEAAGLRRIVHISALGASVSSA
HHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
SMYQRSKARGEAVLLSAGLDVTLLRPSVIFGAEDKFLNTFARLQQLFPVVPLAASQARFQ
HHHHHHHCCCCEEEEECCCCEEEECCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PVWVEDVASAVVHCLQDSSSIGQVYEACGPDVFTLRQLVELAGRYAGVNGGKGRPVIALP
CCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
APLGRLQARLMELLPGEPLLSRDNLDAMQTDNVASGKLPGLKALGITPAALGAIAPSYLG
CCHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHC
AQGLRSGLTAKRKTAGRF
HHHHHHCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]