| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789750
Identifier: 91789750
GI number: 91789750
Start: 4103505
End: 4104089
Strand: Direct
Name: 91789750
Synonym: Bpro_3908
Alternate gene names: NA
Gene position: 4103505-4104089 (Clockwise)
Preceding gene: 91789749
Following gene: 91789752
Centisome position: 78.91
GC content: 63.76
Gene sequence:
>585_bases ATGACCCAAGCTGTCGGGGCCATGGCGGTCCTCGCCTGCCGGAACAGGAAATGCTGGACGAACTGGCTGGCCAGACACCA CGCCAGCAGCCCGGGTGTCTGGCTGCAGATCGCCAAGAAGGATTCGGGCCTGGCGTCCATCTCCCACGCCGAAGCGCTGG AAGCGGCCTTGTGCCAGGGCTGGATAGACGGCCAGCGCAAAAGCCTGGACGCGCAATACTTCCTGCAGAAATTCACGCCG CGCCGGACCAGGAGCATCTGGTCCAAAATCAACCGTGAGAAGGCATTGGCGCTGCTGGCTGCCGGGCACATGCAAGCCGC CGGCCTGGCCGAGATCGAACGCGCCAAGGCCGATGGCCGCTGGGATGCGGCCTACGACGGGCAGGCAAAGGTGACCGTCC CTGAAGACCTGGCGGCCCTGCTGGCCAGGGAGCCCCAGGCGAAAGCCTTTTTTGAATCCCTCGACTCACGCAACCGCTAC GCCATCCTGTTTCGGCTCCAGACGGCGAAAAAGCAGGAGACCCGGGAGCGTCGCCTCCTGCAATTCACAGGGATGCTGAG CCGCGGAGAGAAAATTTATCCCTGA
Upstream 100 bases:
>100_bases GGTCACCGAGGCCAGCCTGACCTATGTGGCGATCGACGATTTCGGCAAGCCGCGCAAGATTGCCAGCACCTGACCTCCTG CCCACGCAAAAAATGACACC
Downstream 100 bases:
>100_bases ACGGGGCCCACGCCGGCCTGCAGCGAAGGCCTCAGAGGCTGAGAGTTTTTCGAAGCGACGGCATTTCCTCCCTCGCCCCT TTGGGGAGAGGGTTGGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MTQAVGAMAVLACRNRKCWTNWLARHHASSPGVWLQIAKKDSGLASISHAEALEAALCQGWIDGQRKSLDAQYFLQKFTP RRTRSIWSKINREKALALLAAGHMQAAGLAEIERAKADGRWDAAYDGQAKVTVPEDLAALLAREPQAKAFFESLDSRNRY AILFRLQTAKKQETRERRLLQFTGMLSRGEKIYP
Sequences:
>Translated_194_residues MTQAVGAMAVLACRNRKCWTNWLARHHASSPGVWLQIAKKDSGLASISHAEALEAALCQGWIDGQRKSLDAQYFLQKFTP RRTRSIWSKINREKALALLAAGHMQAAGLAEIERAKADGRWDAAYDGQAKVTVPEDLAALLAREPQAKAFFESLDSRNRY AILFRLQTAKKQETRERRLLQFTGMLSRGEKIYP >Mature_193_residues TQAVGAMAVLACRNRKCWTNWLARHHASSPGVWLQIAKKDSGLASISHAEALEAALCQGWIDGQRKSLDAQYFLQKFTPR RTRSIWSKINREKALALLAAGHMQAAGLAEIERAKADGRWDAAYDGQAKVTVPEDLAALLAREPQAKAFFESLDSRNRYA ILFRLQTAKKQETRERRLLQFTGMLSRGEKIYP
Specific function: Unknown
COG id: COG4430
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21798; Mature: 21667
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQAVGAMAVLACRNRKCWTNWLARHHASSPGVWLQIAKKDSGLASISHAEALEAALCQG CCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH WIDGQRKSLDAQYFLQKFTPRRTRSIWSKINREKALALLAAGHMQAAGLAEIERAKADGR HHCCHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC WDAAYDGQAKVTVPEDLAALLAREPQAKAFFESLDSRNRYAILFRLQTAKKQETRERRLL CCCCCCCCEEEECHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHH QFTGMLSRGEKIYP HHHHHHHCCCCCCC >Mature Secondary Structure TQAVGAMAVLACRNRKCWTNWLARHHASSPGVWLQIAKKDSGLASISHAEALEAALCQG CCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH WIDGQRKSLDAQYFLQKFTPRRTRSIWSKINREKALALLAAGHMQAAGLAEIERAKADGR HHCCHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC WDAAYDGQAKVTVPEDLAALLAREPQAKAFFESLDSRNRYAILFRLQTAKKQETRERRLL CCCCCCCCEEEECHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHH QFTGMLSRGEKIYP HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA