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The map label for this gene is tapB [H]

Identifier: 91789724

GI number: 91789724

Start: 4074652

End: 4076463

Strand: Reverse

Name: tapB [H]

Synonym: Bpro_3882

Alternate gene names: 91789724

Gene position: 4076463-4074652 (Counterclockwise)

Preceding gene: 91789725

Following gene: 91789723

Centisome position: 78.39

GC content: 64.46

Gene sequence:

>1812_bases
ATGAGCGCCGTGATACCCCCCCCACGCCCCACTTCCTCGCGGGACTCTCAGGGTAAAAAAGTCCATGCCGGCCCGCTCGA
CTGGCGCAAGCTGGTCGAGTGGCTCAGTGAAGACGGCGTGATCAGCAGCGCCGAGGCGCAGCGCACCATTGCGCGCTGCT
CACAGGTGCAAAGCGCCCAGGCTCCCCTGATCCGGCTGGCCAGTGTCAGCATGGTGCGCGTGGCCGACGGCAAGCCGCTC
GACATCGAAACCATTGCCCAGTGGCTGGCCGGCCGGGCCGATCTCAACTACCTGAGGATTGACCCGCTGAAGGTGGATGT
GGGCAAGGTGGCCGACACCATGTCAGCGGTGTATGCCGAGCGGCACAAGGTGTTGCCGGTGCAGGTGACCCCCCGGGAGG
TGGTGATTGCCACGTCCGAGCCCTTTGTCACGGACTGGGTGGCGGAGGTTGAGCGCCAGGCCAAGCGCAGCGTGCGCCTG
GTGGTGGCCAATCCGCTGGAAATTGCCAAATACACGGCCGAGTTTTTTGCGCTGGCCAAATCCGTCCGGGCGGCGCTCAA
GTCGGGCGGCACCTCGGGCTCGGCCAGCTTTGAGCAGCTGGTGGAGCTGAACAAGAGCAACAAGCAGCTCGATGCCAACG
ACCAGGGGGTGGTGCAGGTGGTGGACTGGCTCTGGCAGTACGCCTTTGACCAGCGCGCCAGTGACATCCACCTGGAGCCG
CGGCGCGAGCAGGGTGTGATCCGTTTCCGGATTGACGGTGTACTGCATCCGGTCTACCAGTTGCCCATGGGCGTGCACAA
CGCCATGACGGCGCGCATCAAACTGCTGGGCCGTATGGATGTGGTTGAAAAGCGACGCCCGCAGGATGGCCGCATCAAGA
CCCGCAACCCGCGCGGCGACGAAATTGAAATGCGCCTGTCAACCCTGCCCACGGCCTTCGGCGAAAAGATGGTGATGCGG
ATTTTTGACCCGGACACCACGGTCAAGGACCTGGACGCGCTGGGTTTTTCGCAGCATGACGCGGAGCGCTGGGAGCAACT
GCTCAAGCGGCCCTACGGCATTGTTTTAGTCACCGGGCCGACCGGCTCCGGCAAGACCACCACGCTGTACTCCACGCTCA
AGCGTCTGGCGACTGAAGAGGTCAATGTCAGCACGATTGAAGACCCGATCGAGATGATCGAGCCGGCGTTCAACCAGACG
CAGGTGCAGGCGCACCTGGATTTCGATTTCCCCGAAGGGCTGCGCGCGCTGATGCGGCAGGACCCCGACATCATCATGGT
CGGCGAAATCCGCGACCTGCAGACCGCGGAAATGGCCGTGCAGGCCGCGCTGACGGGCCACCTGGTCTTCAGCACGCTGC
ACACCAACGACGCGCCCTCGGCGGTCTCGCGCCTGATGGAGCTGGGCGTGCCTGCCTACCTGATCAACGCCACGCTGCTG
GGCGTGCTGGCGCAGCGGCTGGTGCGCACCCTGTGCGCGCAATGCCGTGAAAAGGACGAAGGCAGCTCGCGTGAAGCGTT
GGCGGAAGTCGTCAAACCCTGGCAAATCAACGGGGCTTACCGGCCCTACAAGCCGGCCGGCTGTGTCGATTGCCGCATGA
CCGGCTTTCTGGGTCGGATGGGGCTGTACGAGTTGCTGACGGTGACCGAAGCCTTCAAGGACAAGGTCACCCGGGAGCCG
AATATTGACGCGCTGCGGCGCCAGGCGGTGACAGACGGCATGCGCCCGTTGCGGCTGGCGGGTGCGCTCAAGGTGGCGGA
AGGGGTGACCACCATCGAGGAAATCCTCTCCACCACCCCGCCGATGTCCTGA

Upstream 100 bases:

>100_bases
CTGCCCGCCAAAAAGTGGCTGCGGCTTTTCAAGCCGGTGACCTGATGCCGGATGAGGACGGGGTGGCAATCGCCGGAGTG
GATCGGGTACAGTGCCATCC

Downstream 100 bases:

>100_bases
GCCGGACCTGAGCAGGTCCCGCGCGCCCCAATCGGGTGCCTTTAGAACCTGTTTACGATCTAAACGGGGCCTCGTTTAGA
TCGTAAACAGGTTCTTAGGC

Product: type II secretion system protein E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 603; Mature: 602

Protein sequence:

>603_residues
MSAVIPPPRPTSSRDSQGKKVHAGPLDWRKLVEWLSEDGVISSAEAQRTIARCSQVQSAQAPLIRLASVSMVRVADGKPL
DIETIAQWLAGRADLNYLRIDPLKVDVGKVADTMSAVYAERHKVLPVQVTPREVVIATSEPFVTDWVAEVERQAKRSVRL
VVANPLEIAKYTAEFFALAKSVRAALKSGGTSGSASFEQLVELNKSNKQLDANDQGVVQVVDWLWQYAFDQRASDIHLEP
RREQGVIRFRIDGVLHPVYQLPMGVHNAMTARIKLLGRMDVVEKRRPQDGRIKTRNPRGDEIEMRLSTLPTAFGEKMVMR
IFDPDTTVKDLDALGFSQHDAERWEQLLKRPYGIVLVTGPTGSGKTTTLYSTLKRLATEEVNVSTIEDPIEMIEPAFNQT
QVQAHLDFDFPEGLRALMRQDPDIIMVGEIRDLQTAEMAVQAALTGHLVFSTLHTNDAPSAVSRLMELGVPAYLINATLL
GVLAQRLVRTLCAQCREKDEGSSREALAEVVKPWQINGAYRPYKPAGCVDCRMTGFLGRMGLYELLTVTEAFKDKVTREP
NIDALRRQAVTDGMRPLRLAGALKVAEGVTTIEEILSTTPPMS

Sequences:

>Translated_603_residues
MSAVIPPPRPTSSRDSQGKKVHAGPLDWRKLVEWLSEDGVISSAEAQRTIARCSQVQSAQAPLIRLASVSMVRVADGKPL
DIETIAQWLAGRADLNYLRIDPLKVDVGKVADTMSAVYAERHKVLPVQVTPREVVIATSEPFVTDWVAEVERQAKRSVRL
VVANPLEIAKYTAEFFALAKSVRAALKSGGTSGSASFEQLVELNKSNKQLDANDQGVVQVVDWLWQYAFDQRASDIHLEP
RREQGVIRFRIDGVLHPVYQLPMGVHNAMTARIKLLGRMDVVEKRRPQDGRIKTRNPRGDEIEMRLSTLPTAFGEKMVMR
IFDPDTTVKDLDALGFSQHDAERWEQLLKRPYGIVLVTGPTGSGKTTTLYSTLKRLATEEVNVSTIEDPIEMIEPAFNQT
QVQAHLDFDFPEGLRALMRQDPDIIMVGEIRDLQTAEMAVQAALTGHLVFSTLHTNDAPSAVSRLMELGVPAYLINATLL
GVLAQRLVRTLCAQCREKDEGSSREALAEVVKPWQINGAYRPYKPAGCVDCRMTGFLGRMGLYELLTVTEAFKDKVTREP
NIDALRRQAVTDGMRPLRLAGALKVAEGVTTIEEILSTTPPMS
>Mature_602_residues
SAVIPPPRPTSSRDSQGKKVHAGPLDWRKLVEWLSEDGVISSAEAQRTIARCSQVQSAQAPLIRLASVSMVRVADGKPLD
IETIAQWLAGRADLNYLRIDPLKVDVGKVADTMSAVYAERHKVLPVQVTPREVVIATSEPFVTDWVAEVERQAKRSVRLV
VANPLEIAKYTAEFFALAKSVRAALKSGGTSGSASFEQLVELNKSNKQLDANDQGVVQVVDWLWQYAFDQRASDIHLEPR
REQGVIRFRIDGVLHPVYQLPMGVHNAMTARIKLLGRMDVVEKRRPQDGRIKTRNPRGDEIEMRLSTLPTAFGEKMVMRI
FDPDTTVKDLDALGFSQHDAERWEQLLKRPYGIVLVTGPTGSGKTTTLYSTLKRLATEEVNVSTIEDPIEMIEPAFNQTQ
VQAHLDFDFPEGLRALMRQDPDIIMVGEIRDLQTAEMAVQAALTGHLVFSTLHTNDAPSAVSRLMELGVPAYLINATLLG
VLAQRLVRTLCAQCREKDEGSSREALAEVVKPWQINGAYRPYKPAGCVDCRMTGFLGRMGLYELLTVTEAFKDKVTREPN
IDALRRQAVTDGMRPLRLAGALKVAEGVTTIEEILSTTPPMS

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG2804

COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1789723, Length=380, Percent_Identity=43.1578947368421, Blast_Score=314, Evalue=1e-86,
Organism=Escherichia coli, GI1786296, Length=376, Percent_Identity=42.5531914893617, Blast_Score=297, Evalue=1e-81,
Organism=Escherichia coli, GI87082188, Length=178, Percent_Identity=38.7640449438202, Blast_Score=105, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013374
- InterPro:   IPR007831
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E; PF05157 GSPII_E_N [H]

EC number: NA

Molecular weight: Translated: 66878; Mature: 66747

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS00662 T2SP_E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVIPPPRPTSSRDSQGKKVHAGPLDWRKLVEWLSEDGVISSAEAQRTIARCSQVQSAQ
CCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
APLIRLASVSMVRVADGKPLDIETIAQWLAGRADLNYLRIDPLKVDVGKVADTMSAVYAE
CCHHHHHHCEEEEECCCCCCCHHHHHHHHCCCCCCCEEEECCEEECHHHHHHHHHHHHHH
RHKVLPVQVTPREVVIATSEPFVTDWVAEVERQAKRSVRLVVANPLEIAKYTAEFFALAK
HCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHH
SVRAALKSGGTSGSASFEQLVELNKSNKQLDANDQGVVQVVDWLWQYAFDQRASDIHLEP
HHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
RREQGVIRFRIDGVLHPVYQLPMGVHNAMTARIKLLGRMDVVEKRRPQDGRIKTRNPRGD
CCCCCEEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCC
EIEMRLSTLPTAFGEKMVMRIFDPDTTVKDLDALGFSQHDAERWEQLLKRPYGIVLVTGP
EEEEHHHHCCHHHHHHHEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECC
TGSGKTTTLYSTLKRLATEEVNVSTIEDPIEMIEPAFNQTQVQAHLDFDFPEGLRALMRQ
CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHC
DPDIIMVGEIRDLQTAEMAVQAALTGHLVFSTLHTNDAPSAVSRLMELGVPAYLINATLL
CCCEEEECCCCCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCHHHHHHHHH
GVLAQRLVRTLCAQCREKDEGSSREALAEVVKPWQINGAYRPYKPAGCVDCRMTGFLGRM
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEECCCCCCCCCCCCCCHHHHHHHHHHH
GLYELLTVTEAFKDKVTREPNIDALRRQAVTDGMRPLRLAGALKVAEGVTTIEEILSTTP
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PMS
CCC
>Mature Secondary Structure 
SAVIPPPRPTSSRDSQGKKVHAGPLDWRKLVEWLSEDGVISSAEAQRTIARCSQVQSAQ
CCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
APLIRLASVSMVRVADGKPLDIETIAQWLAGRADLNYLRIDPLKVDVGKVADTMSAVYAE
CCHHHHHHCEEEEECCCCCCCHHHHHHHHCCCCCCCEEEECCEEECHHHHHHHHHHHHHH
RHKVLPVQVTPREVVIATSEPFVTDWVAEVERQAKRSVRLVVANPLEIAKYTAEFFALAK
HCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHH
SVRAALKSGGTSGSASFEQLVELNKSNKQLDANDQGVVQVVDWLWQYAFDQRASDIHLEP
HHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
RREQGVIRFRIDGVLHPVYQLPMGVHNAMTARIKLLGRMDVVEKRRPQDGRIKTRNPRGD
CCCCCEEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCC
EIEMRLSTLPTAFGEKMVMRIFDPDTTVKDLDALGFSQHDAERWEQLLKRPYGIVLVTGP
EEEEHHHHCCHHHHHHHEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECC
TGSGKTTTLYSTLKRLATEEVNVSTIEDPIEMIEPAFNQTQVQAHLDFDFPEGLRALMRQ
CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHC
DPDIIMVGEIRDLQTAEMAVQAALTGHLVFSTLHTNDAPSAVSRLMELGVPAYLINATLL
CCCEEEECCCCCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCHHHHHHHHH
GVLAQRLVRTLCAQCREKDEGSSREALAEVVKPWQINGAYRPYKPAGCVDCRMTGFLGRM
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEECCCCCCCCCCCCCCHHHHHHHHHHH
GLYELLTVTEAFKDKVTREPNIDALRRQAVTDGMRPLRLAGALKVAEGVTTIEEILSTTP
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PMS
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]