Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is mmgC [H]

Identifier: 91789689

GI number: 91789689

Start: 4035804

End: 4036985

Strand: Direct

Name: mmgC [H]

Synonym: Bpro_3845

Alternate gene names: 91789689

Gene position: 4035804-4036985 (Clockwise)

Preceding gene: 91789688

Following gene: 91789690

Centisome position: 77.61

GC content: 60.24

Gene sequence:

>1182_bases
ATGGATTTAGCTTTCACCCCTGAAGAGCAGGCATTTCGCGAAGAAATACGCGCCTGGGTTCATGCCAGCCTGCCCCAAGA
CATTTCGCACAAGGTGCACAACGCCTTGCGCCTGTCGCGTGATGACATGCAGCGCTGGGCCAAAATCCTGGGCAAAAAAG
GCTGGCTGGGCCACGGCTGGCCCAAGGAATTTGGCGGCCCGGGCTGGAACGCCGTGCAAAAACACCTGTTTGAAGAAGAA
TGCGCGCTGGCTGGCGCGCCGCGTGTTGTGCCATTCGGCCCCGTGATGGTGGCCCCCGTCATCATGGCCTTCGGCAATGC
CGAGCAGCAAAAGCGCTTTCTGCCGGGCATCGCCAGCGGCGACGTCTGGTGGAGCCAGGGCTACAGCGAGCCAGGCTCCG
GCTCCGACCTTGCATCGGTCAAATGCCGGGCCGAACGGCAGGGCGACAAATACATCGTCAATGGCCAGAAAACCTGGACC
ACGCTGGGCCAGTACGGCGAATGGATTTTCTGCCTGGTGCGCACCAGCACAGAGGGCAAACCGCAAACCGGCATCTCCTT
TTTGCTGATCGACATGAAGTCGCCCGGCGTCACGGTGCGGCCCATCAAGCTGCTCGATGGCGAAAGCGAAGTCAACGAGG
TCTGGTTCGACAACGTGGAAGTGCCCGCGGAAAATCTGATCGGCGAGGAAAACAAGGGCTGGACCTACGCCAAGCACCTG
CTCAGCCACGAGCGCACCAACATTGCCGACGTCAATCGCGCCAAGCGCGAACTGGAACGACTCAAGCGCATCGCCAAAAC
GGAAAACGTTTATGACGACATGCGGTTTGGCGACGAGATCGCCAAGCTCGAAGTGGATGTGGTGGCGCTGGAAATGCTGG
TGCTGCGCGTGCTGTCCGCTGAAAAATCCGGCAAGAACTCGCTGGACATCGCCGGGCTGCTCAAGATCCGGGGCAGCGAG
ATCCAGCAGCGCTACAGCGAACTGATGATGCTGGCCGCCGGCCCGTTCAGCCTGCCTTTCATCGAGGAGGCCATGGAAGC
GGGCTGGCAGGGCAACTTCCCGGGCGGCGTGCTGGCCAATGCGCCGCTGGCGTCCACCTATTTCAACATGCGCAAAACCA
CGATTTACGGCGGCTCCAACGAGGTCCAGCGAAATATCGTTTCACAAGTCGTTTTGGGTTAA

Upstream 100 bases:

>100_bases
GACGCCCACGATCATTCGCCAAATTAGGCCGGTTTGTCCCCGTTTTGACAGGTCAAAAAGCACATTCGTGCTAAAACCGG
GGAAATCGACGGAGACATGT

Downstream 100 bases:

>100_bases
TGCTGGTTTAAAGGAAAGCATCATGGATTTCGATTTCACCGATGACCAGGAACAGCTTCGCGACGCGGTTCGCAAATGGG
TGGACAAGGGCTACGACTTC

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MDLAFTPEEQAFREEIRAWVHASLPQDISHKVHNALRLSRDDMQRWAKILGKKGWLGHGWPKEFGGPGWNAVQKHLFEEE
CALAGAPRVVPFGPVMVAPVIMAFGNAEQQKRFLPGIASGDVWWSQGYSEPGSGSDLASVKCRAERQGDKYIVNGQKTWT
TLGQYGEWIFCLVRTSTEGKPQTGISFLLIDMKSPGVTVRPIKLLDGESEVNEVWFDNVEVPAENLIGEENKGWTYAKHL
LSHERTNIADVNRAKRELERLKRIAKTENVYDDMRFGDEIAKLEVDVVALEMLVLRVLSAEKSGKNSLDIAGLLKIRGSE
IQQRYSELMMLAAGPFSLPFIEEAMEAGWQGNFPGGVLANAPLASTYFNMRKTTIYGGSNEVQRNIVSQVVLG

Sequences:

>Translated_393_residues
MDLAFTPEEQAFREEIRAWVHASLPQDISHKVHNALRLSRDDMQRWAKILGKKGWLGHGWPKEFGGPGWNAVQKHLFEEE
CALAGAPRVVPFGPVMVAPVIMAFGNAEQQKRFLPGIASGDVWWSQGYSEPGSGSDLASVKCRAERQGDKYIVNGQKTWT
TLGQYGEWIFCLVRTSTEGKPQTGISFLLIDMKSPGVTVRPIKLLDGESEVNEVWFDNVEVPAENLIGEENKGWTYAKHL
LSHERTNIADVNRAKRELERLKRIAKTENVYDDMRFGDEIAKLEVDVVALEMLVLRVLSAEKSGKNSLDIAGLLKIRGSE
IQQRYSELMMLAAGPFSLPFIEEAMEAGWQGNFPGGVLANAPLASTYFNMRKTTIYGGSNEVQRNIVSQVVLG
>Mature_393_residues
MDLAFTPEEQAFREEIRAWVHASLPQDISHKVHNALRLSRDDMQRWAKILGKKGWLGHGWPKEFGGPGWNAVQKHLFEEE
CALAGAPRVVPFGPVMVAPVIMAFGNAEQQKRFLPGIASGDVWWSQGYSEPGSGSDLASVKCRAERQGDKYIVNGQKTWT
TLGQYGEWIFCLVRTSTEGKPQTGISFLLIDMKSPGVTVRPIKLLDGESEVNEVWFDNVEVPAENLIGEENKGWTYAKHL
LSHERTNIADVNRAKRELERLKRIAKTENVYDDMRFGDEIAKLEVDVVALEMLVLRVLSAEKSGKNSLDIAGLLKIRGSE
IQQRYSELMMLAAGPFSLPFIEEAMEAGWQGNFPGGVLANAPLASTYFNMRKTTIYGGSNEVQRNIVSQVVLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=403, Percent_Identity=26.302729528536, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI226958414, Length=235, Percent_Identity=30.6382978723404, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI187960098, Length=344, Percent_Identity=25, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI4557231, Length=344, Percent_Identity=25, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI226958412, Length=213, Percent_Identity=30.0469483568075, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI4501859, Length=396, Percent_Identity=24.4949494949495, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI4557233, Length=367, Percent_Identity=26.7029972752044, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI7656849, Length=356, Percent_Identity=25.8426966292135, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI21361497, Length=254, Percent_Identity=27.9527559055118, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI4557235, Length=213, Percent_Identity=30.0469483568075, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI76496475, Length=213, Percent_Identity=30.0469483568075, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI38505218, Length=311, Percent_Identity=24.4372990353698, Blast_Score=73, Evalue=6e-13,
Organism=Escherichia coli, GI87081958, Length=307, Percent_Identity=24.4299674267101, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1786223, Length=354, Percent_Identity=24.2937853107345, Blast_Score=81, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17569725, Length=348, Percent_Identity=25, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17534899, Length=349, Percent_Identity=26.3610315186246, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17570075, Length=421, Percent_Identity=24.2280285035629, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17538396, Length=251, Percent_Identity=30.6772908366534, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17508101, Length=350, Percent_Identity=26.5714285714286, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17505929, Length=348, Percent_Identity=26.7241379310345, Blast_Score=104, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI17551932, Length=205, Percent_Identity=31.219512195122, Blast_Score=101, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI71985184, Length=208, Percent_Identity=30.7692307692308, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71985192, Length=208, Percent_Identity=30.7692307692308, Blast_Score=89, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI71990804, Length=199, Percent_Identity=30.1507537688442, Blast_Score=88, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17506239, Length=369, Percent_Identity=24.1192411924119, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI32563615, Length=198, Percent_Identity=31.3131313131313, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71982178, Length=225, Percent_Identity=26.6666666666667, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI21355753, Length=213, Percent_Identity=32.3943661971831, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24666513, Length=289, Percent_Identity=28.0276816608997, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI281363737, Length=233, Percent_Identity=29.6137339055794, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24660351, Length=344, Percent_Identity=25.8720930232558, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21356377, Length=377, Percent_Identity=25.9946949602122, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24646207, Length=415, Percent_Identity=24.0963855421687, Blast_Score=79, Evalue=8e-15,
Organism=Drosophila melanogaster, GI19920834, Length=232, Percent_Identity=29.3103448275862, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43834; Mature: 43834

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLAFTPEEQAFREEIRAWVHASLPQDISHKVHNALRLSRDDMQRWAKILGKKGWLGHGW
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCC
PKEFGGPGWNAVQKHLFEEECALAGAPRVVPFGPVMVAPVIMAFGNAEQQKRFLPGIASG
CHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCC
DVWWSQGYSEPGSGSDLASVKCRAERQGDKYIVNGQKTWTTLGQYGEWIFCLVRTSTEGK
CCHHHCCCCCCCCCCCHHHHEEHHHCCCCEEEECCCHHHHHHHHCCCEEEEEEEECCCCC
PQTGISFLLIDMKSPGVTVRPIKLLDGESEVNEVWFDNVEVPAENLIGEENKGWTYAKHL
CCCCCEEEEEEECCCCCEEEEEEEECCCCHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHH
LSHERTNIADVNRAKRELERLKRIAKTENVYDDMRFGDEIAKLEVDVVALEMLVLRVLSA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
EKSGKNSLDIAGLLKIRGSEIQQRYSELMMLAAGPFSLPFIEEAMEAGWQGNFPGGVLAN
CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCC
APLASTYFNMRKTTIYGGSNEVQRNIVSQVVLG
CCHHHHHHHHHEEEEECCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLAFTPEEQAFREEIRAWVHASLPQDISHKVHNALRLSRDDMQRWAKILGKKGWLGHGW
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCC
PKEFGGPGWNAVQKHLFEEECALAGAPRVVPFGPVMVAPVIMAFGNAEQQKRFLPGIASG
CHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCC
DVWWSQGYSEPGSGSDLASVKCRAERQGDKYIVNGQKTWTTLGQYGEWIFCLVRTSTEGK
CCHHHCCCCCCCCCCCHHHHEEHHHCCCCEEEECCCHHHHHHHHCCCEEEEEEEECCCCC
PQTGISFLLIDMKSPGVTVRPIKLLDGESEVNEVWFDNVEVPAENLIGEENKGWTYAKHL
CCCCCEEEEEEECCCCCEEEEEEEECCCCHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHH
LSHERTNIADVNRAKRELERLKRIAKTENVYDDMRFGDEIAKLEVDVVALEMLVLRVLSA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
EKSGKNSLDIAGLLKIRGSEIQQRYSELMMLAAGPFSLPFIEEAMEAGWQGNFPGGVLAN
CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCC
APLASTYFNMRKTTIYGGSNEVQRNIVSQVVLG
CCHHHHHHHHHEEEEECCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]