| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789668
Identifier: 91789668
GI number: 91789668
Start: 4012721
End: 4013425
Strand: Direct
Name: 91789668
Synonym: Bpro_3824
Alternate gene names: NA
Gene position: 4012721-4013425 (Clockwise)
Preceding gene: 91789665
Following gene: 91789673
Centisome position: 77.16
GC content: 65.25
Gene sequence:
>705_bases ATGCCCTCTTCCGCCACCTCTCAAAACGACGCAGCCGCGCCACGCGGCAGGTACCACCACGGCAGCCTGCGCGAGGCCAT GGTGGCCGCCGCGCTTGAACTGATCGAAGCCCATGGCGTGGAGCACTTAAGCGTGCGCGAAGCGGCGAGGACGGCTGGCG TGTCTCCCGGTGCCCCGTTTAGGCACTTTCCCACCAAGGCTGCATTGCTGACCGCCGTTGCAGAACAAGCGACAGAGCGC CTGCACGCGCAGGTGGAATTGGGCCTTGCCAACAGCGCGGGCCAGCCAGCACTGCTGCGTTTCGCGGCCATCGGAGAGGC CTACCTGGATTGGGCGGCGCGTCATCCCACACATTTCCAAGTGGTAAGCCAGCGCCAATTGCTCGATGCAGACGCCCCCG CGCGCCTGGCCCCGCACAACGACGCGATCCGTGCCCATATGCAGGCGTTGCTGGACGAAGCGTTCGCCGACACTCCCACC GCGCTCGCCCGGCTACCAGCGCTGCAATTGCTCGGACGAGCCCTGGTTTATGGCCTGTCACGCATGGGGGTGGATGGACA TTTCCCGGAATGGGACCTTGGCCATGCTTCTGCGCCGACCGCCGTGCGCGACGCCTTTGTGCTTTTTATCGAACTGCTGG CCACCGGACGGGATGCTCAAACACGTGAGGCGGTGGCCCGATGGGCGGAGAGGCTTTCTGCTTGA
Upstream 100 bases:
>100_bases TCCTGGGTTAACTGGCGACGATGTAATCGGTGAATACATCTGCATTGAATTCTAACCCTAAAATAATCAATGCTTACATT GTCTTAGCACCGAATCCCCA
Downstream 100 bases:
>100_bases CGCTGGGCGGTGGTCTTGCTTTCGGCGCGCGCAATGCACCTTGAGTGAGCGATGGCGGCTTCTCCCGTCGATGATATTGG TGCCAGTTAGCCGACCGACA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Transcription Regulator TetR Family Protein; Regulatory Protein Tetr; TetR-Family Transcriptional Regulator
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MPSSATSQNDAAAPRGRYHHGSLREAMVAAALELIEAHGVEHLSVREAARTAGVSPGAPFRHFPTKAALLTAVAEQATER LHAQVELGLANSAGQPALLRFAAIGEAYLDWAARHPTHFQVVSQRQLLDADAPARLAPHNDAIRAHMQALLDEAFADTPT ALARLPALQLLGRALVYGLSRMGVDGHFPEWDLGHASAPTAVRDAFVLFIELLATGRDAQTREAVARWAERLSA
Sequences:
>Translated_234_residues MPSSATSQNDAAAPRGRYHHGSLREAMVAAALELIEAHGVEHLSVREAARTAGVSPGAPFRHFPTKAALLTAVAEQATER LHAQVELGLANSAGQPALLRFAAIGEAYLDWAARHPTHFQVVSQRQLLDADAPARLAPHNDAIRAHMQALLDEAFADTPT ALARLPALQLLGRALVYGLSRMGVDGHFPEWDLGHASAPTAVRDAFVLFIELLATGRDAQTREAVARWAERLSA >Mature_233_residues PSSATSQNDAAAPRGRYHHGSLREAMVAAALELIEAHGVEHLSVREAARTAGVSPGAPFRHFPTKAALLTAVAEQATERL HAQVELGLANSAGQPALLRFAAIGEAYLDWAARHPTHFQVVSQRQLLDADAPARLAPHNDAIRAHMQALLDEAFADTPTA LARLPALQLLGRALVYGLSRMGVDGHFPEWDLGHASAPTAVRDAFVLFIELLATGRDAQTREAVARWAERLSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25072; Mature: 24940
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSATSQNDAAAPRGRYHHGSLREAMVAAALELIEAHGVEHLSVREAARTAGVSPGAPF CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC RHFPTKAALLTAVAEQATERLHAQVELGLANSAGQPALLRFAAIGEAYLDWAARHPTHFQ CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH VVSQRQLLDADAPARLAPHNDAIRAHMQALLDEAFADTPTALARLPALQLLGRALVYGLS HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH RMGVDGHFPEWDLGHASAPTAVRDAFVLFIELLATGRDAQTREAVARWAERLSA HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure PSSATSQNDAAAPRGRYHHGSLREAMVAAALELIEAHGVEHLSVREAARTAGVSPGAPF CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC RHFPTKAALLTAVAEQATERLHAQVELGLANSAGQPALLRFAAIGEAYLDWAARHPTHFQ CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH VVSQRQLLDADAPARLAPHNDAIRAHMQALLDEAFADTPTALARLPALQLLGRALVYGLS HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH RMGVDGHFPEWDLGHASAPTAVRDAFVLFIELLATGRDAQTREAVARWAERLSA HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA