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The map label for this gene is rsmB [H]

Identifier: 91789649

GI number: 91789649

Start: 3991993

End: 3993246

Strand: Reverse

Name: rsmB [H]

Synonym: Bpro_3805

Alternate gene names: 91789649

Gene position: 3993246-3991993 (Counterclockwise)

Preceding gene: 91789650

Following gene: 91789648

Centisome position: 76.79

GC content: 61.0

Gene sequence:

>1254_bases
ATGCACCCTAAAGCCTTACTCGACAGTTGTTCCGAGCTTCTCAAGCAGGTCCTTAAATTTGAACACCCCGCCGACATGGT
GGTGTCGCGCTATTTTCGCGAGATGCGCCTCGGCCCACGCGAGCGCGCCACCGTGGCGGAAACAATTTATGGGGTGCTGC
GCAAAAAAAACCTCTATGCCTATCTTGCCCAGCACGGCAGCGGCCCGCCGGAGCGGCGCCTGGCCATTCTGGGTTTTGCC
GCGGAGCGTGATTTTCTGCTGAGCGCGCTGACCGAGCAGGAGAAAGACTGGCTGGCGCGTTGTGACCAGGTGAAGCCGTC
AGACCTGATGGAGCTGCACCGCCACAACCTGCCGCAGTGGCTGGTGGAGCCACTCAAGGCTCAGCTGGGTGACGACTTCT
GGCCGCTGGTGGAAAGCCTCAATGCCCCGGCAGGGCTGGATTTGCGGGTCAATACCCTGAAGGAAAAACGGGCTGAGGTC
CAAAAGGAACTGGGCAAGCATGCTATTAAAACAGTAGCCACGCCGTACTCCCCGTGGGGCTTGCGCCTGGTGGACAAGCC
GCAGCTGGGCAAGCTGGACGCCTTCACGCGGGGTGCGATTGAAGTGCAGGATGAGGGCTCGCAACTGCTGGCCCTGCTGC
TTGACGCGAAACGCGGCGAAATGGTGGTGGACTTTTGTGCCGGTGCCGGAGGCAAAACGCTGGCCATCGGTGCCACGATG
CGCAATACCGGACGCCTCTACGCCTTTGACACCTCGGGTCATCGGCTCGATGCGCTCAAGCCCCGGCTGGCACGCAGCGG
CCTGTCCAACGTCCATCCCGTGGCCATTGCCCATGAGCGCGATGACCGCATCAAGCGCCTGGCCGGCAAGATAGACCGGG
TGCTGGTGGATGCGCCCTGTTCGGGTCTGGGTACCCTGCGGCGCAATCCCGACCTCAAATGGCGGCAGAACCCCAAGGCC
ATCGAGGAGCTGACGGCCAAGCAAGCCGCGATTTTGCAGAGTGCCGCACGCCTTTTGAAGCCCGGCGGACGGCTGGTTTA
CGCCACCTGCAGCATTTTGCGTGAAGAAAACGAGGCCATTGCCGAGGCCTTCAGTGCTGCCAATAAAGAGTTCAACGCCC
TTGAAGTGGCGCCCTTGTTGACCCATCTGGGGGTGGAAGGGGCTGAAAGACTGTGTCGGGGTCCTTATTTGCGGCTCTGG
CCCTACCTGCATCAAACCGATGGGTTTTTTGCCGCCGTATGGCAAAAGTTGTGA

Upstream 100 bases:

>100_bases
TTATTCGCCCACGCTGGGTGACATCGAGCGAGACGCCTTCGAACCCATCTACATCCGCACCCCGGCCTGAAGCTGCGCGG
CCAGATGGGACAATAGGGCC

Downstream 100 bases:

>100_bases
TATTTTTGGCGGTAATTGCTGGTAATTAGGTAAAAGTTACAGAATGATCCCGGGTTTTGGGGACTTCTGGCGATTTTTGT
GACCTCTCGATAACTTGGTA

Product: Fmu (Sun)

Products: NA

Alternate protein names: rRNA (cytosine-C(5)-)-methyltransferase rsmB [H]

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MHPKALLDSCSELLKQVLKFEHPADMVVSRYFREMRLGPRERATVAETIYGVLRKKNLYAYLAQHGSGPPERRLAILGFA
AERDFLLSALTEQEKDWLARCDQVKPSDLMELHRHNLPQWLVEPLKAQLGDDFWPLVESLNAPAGLDLRVNTLKEKRAEV
QKELGKHAIKTVATPYSPWGLRLVDKPQLGKLDAFTRGAIEVQDEGSQLLALLLDAKRGEMVVDFCAGAGGKTLAIGATM
RNTGRLYAFDTSGHRLDALKPRLARSGLSNVHPVAIAHERDDRIKRLAGKIDRVLVDAPCSGLGTLRRNPDLKWRQNPKA
IEELTAKQAAILQSAARLLKPGGRLVYATCSILREENEAIAEAFSAANKEFNALEVAPLLTHLGVEGAERLCRGPYLRLW
PYLHQTDGFFAAVWQKL

Sequences:

>Translated_417_residues
MHPKALLDSCSELLKQVLKFEHPADMVVSRYFREMRLGPRERATVAETIYGVLRKKNLYAYLAQHGSGPPERRLAILGFA
AERDFLLSALTEQEKDWLARCDQVKPSDLMELHRHNLPQWLVEPLKAQLGDDFWPLVESLNAPAGLDLRVNTLKEKRAEV
QKELGKHAIKTVATPYSPWGLRLVDKPQLGKLDAFTRGAIEVQDEGSQLLALLLDAKRGEMVVDFCAGAGGKTLAIGATM
RNTGRLYAFDTSGHRLDALKPRLARSGLSNVHPVAIAHERDDRIKRLAGKIDRVLVDAPCSGLGTLRRNPDLKWRQNPKA
IEELTAKQAAILQSAARLLKPGGRLVYATCSILREENEAIAEAFSAANKEFNALEVAPLLTHLGVEGAERLCRGPYLRLW
PYLHQTDGFFAAVWQKL
>Mature_417_residues
MHPKALLDSCSELLKQVLKFEHPADMVVSRYFREMRLGPRERATVAETIYGVLRKKNLYAYLAQHGSGPPERRLAILGFA
AERDFLLSALTEQEKDWLARCDQVKPSDLMELHRHNLPQWLVEPLKAQLGDDFWPLVESLNAPAGLDLRVNTLKEKRAEV
QKELGKHAIKTVATPYSPWGLRLVDKPQLGKLDAFTRGAIEVQDEGSQLLALLLDAKRGEMVVDFCAGAGGKTLAIGATM
RNTGRLYAFDTSGHRLDALKPRLARSGLSNVHPVAIAHERDDRIKRLAGKIDRVLVDAPCSGLGTLRRNPDLKWRQNPKA
IEELTAKQAAILQSAARLLKPGGRLVYATCSILREENEAIAEAFSAANKEFNALEVAPLLTHLGVEGAERLCRGPYLRLW
PYLHQTDGFFAAVWQKL

Specific function: Unknown

COG id: COG0144

COG function: function code J; tRNA and rRNA cytosine-C5-methylases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmB/NOP family [H]

Homologues:

Organism=Homo sapiens, GI76150625, Length=307, Percent_Identity=32.8990228013029, Blast_Score=125, Evalue=9e-29,
Organism=Homo sapiens, GI76150623, Length=307, Percent_Identity=32.8990228013029, Blast_Score=125, Evalue=9e-29,
Organism=Homo sapiens, GI32698918, Length=220, Percent_Identity=29.0909090909091, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI23199998, Length=269, Percent_Identity=31.2267657992565, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI270288818, Length=269, Percent_Identity=31.2267657992565, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI270288816, Length=269, Percent_Identity=31.2267657992565, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI8922322, Length=269, Percent_Identity=31.2267657992565, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI39995082, Length=218, Percent_Identity=29.8165137614679, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI301336155, Length=218, Percent_Identity=29.8165137614679, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI87081985, Length=290, Percent_Identity=31.3793103448276, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI2367212, Length=282, Percent_Identity=32.2695035460993, Blast_Score=119, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17536757, Length=303, Percent_Identity=30.6930693069307, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI115534021, Length=225, Percent_Identity=32, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71998419, Length=224, Percent_Identity=32.1428571428571, Blast_Score=93, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6324268, Length=291, Percent_Identity=30.9278350515464, Blast_Score=112, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6319447, Length=268, Percent_Identity=30.9701492537313, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI22024126, Length=288, Percent_Identity=29.1666666666667, Blast_Score=111, Evalue=9e-25,
Organism=Drosophila melanogaster, GI21355201, Length=281, Percent_Identity=27.0462633451957, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24668781, Length=235, Percent_Identity=28.5106382978723, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21356513, Length=235, Percent_Identity=28.5106382978723, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21356579, Length=219, Percent_Identity=27.3972602739726, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001678
- InterPro:   IPR018314
- InterPro:   IPR006027
- InterPro:   IPR004573 [H]

Pfam domain/function: PF01189 Nol1_Nop2_Fmu; PF01029 NusB [H]

EC number: NA

Molecular weight: Translated: 46506; Mature: 46506

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPKALLDSCSELLKQVLKFEHPADMVVSRYFREMRLGPRERATVAETIYGVLRKKNLYA
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
YLAQHGSGPPERRLAILGFAAERDFLLSALTEQEKDWLARCDQVKPSDLMELHRHNLPQW
HHHHCCCCCHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHH
LVEPLKAQLGDDFWPLVESLNAPAGLDLRVNTLKEKRAEVQKELGKHAIKTVATPYSPWG
HHHHHHHHHCCCHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LRLVDKPQLGKLDAFTRGAIEVQDEGSQLLALLLDAKRGEMVVDFCAGAGGKTLAIGATM
CEEECCCCCCCCCHHHCCCEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEE
RNTGRLYAFDTSGHRLDALKPRLARSGLSNVHPVAIAHERDDRIKRLAGKIDRVLVDAPC
CCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHEEECCCC
SGLGTLRRNPDLKWRQNPKAIEELTAKQAAILQSAARLLKPGGRLVYATCSILREENEAI
CCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
AEAFSAANKEFNALEVAPLLTHLGVEGAERLCRGPYLRLWPYLHQTDGFFAAVWQKL
HHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHC
>Mature Secondary Structure
MHPKALLDSCSELLKQVLKFEHPADMVVSRYFREMRLGPRERATVAETIYGVLRKKNLYA
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
YLAQHGSGPPERRLAILGFAAERDFLLSALTEQEKDWLARCDQVKPSDLMELHRHNLPQW
HHHHCCCCCHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHH
LVEPLKAQLGDDFWPLVESLNAPAGLDLRVNTLKEKRAEVQKELGKHAIKTVATPYSPWG
HHHHHHHHHCCCHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LRLVDKPQLGKLDAFTRGAIEVQDEGSQLLALLLDAKRGEMVVDFCAGAGGKTLAIGATM
CEEECCCCCCCCCHHHCCCEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEE
RNTGRLYAFDTSGHRLDALKPRLARSGLSNVHPVAIAHERDDRIKRLAGKIDRVLVDAPC
CCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHEEECCCC
SGLGTLRRNPDLKWRQNPKAIEELTAKQAAILQSAARLLKPGGRLVYATCSILREENEAI
CCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
AEAFSAANKEFNALEVAPLLTHLGVEGAERLCRGPYLRLWPYLHQTDGFFAAVWQKL
HHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]