| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789626
Identifier: 91789626
GI number: 91789626
Start: 3968304
End: 3968825
Strand: Direct
Name: 91789626
Synonym: Bpro_3781
Alternate gene names: NA
Gene position: 3968304-3968825 (Clockwise)
Preceding gene: 91789625
Following gene: 91789627
Centisome position: 76.31
GC content: 66.09
Gene sequence:
>522_bases ATGACGCAACGCAGCAAGGTAGTCACCCTGCCAGAGGCCACCCGCGCCGAGCTGGACCGCCGCCTGATCACCGAGGGCTT TCGCGGCTATGACGAGCTGGAGCTATGGCTGCGGGAGCTGGGCTACGAGATCGGCAAAAGCAGCATCCACCGCTACGGCA CCAAGCTGGAGCAGCGGCTCGACCAGCTCAAGCGCGCCACCGACCAGGCCAAGGCCCTGGTGGCCGCAGCGCCCGACGAT GCAGGCGACATGAGCCAGGCCGTGCTGCGCCTGATGCAGGAAAAGATTTTCTCGGCGCTGATGGAGATGGAGGTTGACCC CGACGAGCAGTCGCTGGGCGGCCTGGCCAAGGCGCTGGCCCCGCTGGTGCGTGCCAATATCGCGCAGCAGAAGTTTGCCA GCGAGGTCAAGGAAAAAGCCCGCAGCGCGGCCGAGGCGGTGGACAAGCTGGCGCGCAAGGGCGGCTTGACCGACGACACG GTGGACGCCATCCGTCGCCAGATTTTGGGGATTGCAGCATGA
Upstream 100 bases:
>100_bases TGGACCGCTGGTTTGCCGAGCTGGCCCGCTTTGGGGTGGATGTGGTTGAGTACACGGTCGACTGCGAGCCCGGCATTGCA CGGCCTCGCGCCTACTGATC
Downstream 100 bases:
>100_bases CGCTAACTCTGGTTCTCGCCTGGTGGATGTTGGTGCCTGCGGTGTGGACGGCGATATTCATCGCGTGGATGTGGATTGTC TGTGAAACCGTCGAGGATAT
Product: phage-like protein
Products: NA
Alternate protein names: Mu-Like Prophage FluMu Protein Gp; Phage-Like Protein; Mu-Like Prophage Flumu Protein Gp; Bacteriophage Mu
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MTQRSKVVTLPEATRAELDRRLITEGFRGYDELELWLRELGYEIGKSSIHRYGTKLEQRLDQLKRATDQAKALVAAAPDD AGDMSQAVLRLMQEKIFSALMEMEVDPDEQSLGGLAKALAPLVRANIAQQKFASEVKEKARSAAEAVDKLARKGGLTDDT VDAIRRQILGIAA
Sequences:
>Translated_173_residues MTQRSKVVTLPEATRAELDRRLITEGFRGYDELELWLRELGYEIGKSSIHRYGTKLEQRLDQLKRATDQAKALVAAAPDD AGDMSQAVLRLMQEKIFSALMEMEVDPDEQSLGGLAKALAPLVRANIAQQKFASEVKEKARSAAEAVDKLARKGGLTDDT VDAIRRQILGIAA >Mature_172_residues TQRSKVVTLPEATRAELDRRLITEGFRGYDELELWLRELGYEIGKSSIHRYGTKLEQRLDQLKRATDQAKALVAAAPDDA GDMSQAVLRLMQEKIFSALMEMEVDPDEQSLGGLAKALAPLVRANIAQQKFASEVKEKARSAAEAVDKLARKGGLTDDTV DAIRRQILGIAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19110; Mature: 18979
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRSKVVTLPEATRAELDRRLITEGFRGYDELELWLRELGYEIGKSSIHRYGTKLEQRL CCCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQLKRATDQAKALVAAAPDDAGDMSQAVLRLMQEKIFSALMEMEVDPDEQSLGGLAKALA HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH PLVRANIAQQKFASEVKEKARSAAEAVDKLARKGGLTDDTVDAIRRQILGIAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure TQRSKVVTLPEATRAELDRRLITEGFRGYDELELWLRELGYEIGKSSIHRYGTKLEQRL CCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQLKRATDQAKALVAAAPDDAGDMSQAVLRLMQEKIFSALMEMEVDPDEQSLGGLAKALA HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH PLVRANIAQQKFASEVKEKARSAAEAVDKLARKGGLTDDTVDAIRRQILGIAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA