Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91789598

Identifier: 91789598

GI number: 91789598

Start: 3956605

End: 3957330

Strand: Direct

Name: 91789598

Synonym: Bpro_3753

Alternate gene names: NA

Gene position: 3956605-3957330 (Clockwise)

Preceding gene: 91789597

Following gene: 91789599

Centisome position: 76.08

GC content: 66.8

Gene sequence:

>726_bases
ATGCGTCAAAAACTAGCCGGTGTCAAGAACGTAGCCGCCCTTCAAGCGGCCTTTGAAACCCTTTCAAACCGCGATGCAGG
CATCCCCGGCATGGGCCTGGTGCACGGCTTTACCGGCGCGGGCAAGACCACGGCCATCAGCTGGCTCGTCAACCGCACCA
ACGGCGTGTATGCCCGCGCCTACGGCACCTGGACGCCCAACAGCATGCTCGGCAGCATCATGCACGAGCTGGGCGCAGCT
CCCCTGCAGCGCAGCGCCCAGATGCTCAAGTACATCACCGGCGACCTGGAGCGCACCAACCGCCCGCTCTTCATCGACGA
GGCCAACTACTTTGCCGGCGACACCGCCATGCTCGACACGCTGCGCGACATCCACGACGTCAGCAACGTGCCGGTCATCC
TCATCGGCCACGAAGGCACCGAGCGCAAGCTGATCCACCGCGCCCAGCTGGCCCGCCGCATCAGCGAGTGGGTCGAGTTC
AAGCCGCTCGACGCTGAAGACGCCCGCATCCTGGCCGACACGGTGGCCGAGGTCGCCATTGCAGACGACCTGCTGGCCGA
GCTGCACGCCCACGCCAAGGGCAGCATGGGCCTCATGACGGTGGGCCTGGCCCGCGTCGAGGCAATGGCCAAGGCCAACG
GCTGGAAGCGCGTGGACGCCGACCAGTGGGCCGGCCGCGCCTTCTTCCTGGGCAACGCGCCCAAGTCCACGAACGGCAGG
GGCTAA

Upstream 100 bases:

>100_bases
GAAACCCCGGACGCATCCGCATCCGGGGCCAGTTAACCGCTGTGAGCCCAAGGCCTGAGAAACCAGACCACAGCAGAACC
GAAAAAGAAAGAAAGATTGT

Downstream 100 bases:

>100_bases
GCAAATGGGTCGAACCATAGGCGCTCGCTGCAAGGCCCCCAAGGCCGACAACCTGGCACGCAAGCAGGCGTGGCAAGCCA
TGCGCATCATGCGCAGGTTT

Product: prophage MuSo1, DNA transposition protein

Products: NA

Alternate protein names: Prophage MuSo1 DNA Transposition Protein; Transposase Protein B; Prophage; DNA Transposition Protein; AAA ATPase Family Protein; Phage Transposition Protein B; AAA ATPase; Prophage Mu DNA Transposition Protein B; B Protein

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MRQKLAGVKNVAALQAAFETLSNRDAGIPGMGLVHGFTGAGKTTAISWLVNRTNGVYARAYGTWTPNSMLGSIMHELGAA
PLQRSAQMLKYITGDLERTNRPLFIDEANYFAGDTAMLDTLRDIHDVSNVPVILIGHEGTERKLIHRAQLARRISEWVEF
KPLDAEDARILADTVAEVAIADDLLAELHAHAKGSMGLMTVGLARVEAMAKANGWKRVDADQWAGRAFFLGNAPKSTNGR
G

Sequences:

>Translated_241_residues
MRQKLAGVKNVAALQAAFETLSNRDAGIPGMGLVHGFTGAGKTTAISWLVNRTNGVYARAYGTWTPNSMLGSIMHELGAA
PLQRSAQMLKYITGDLERTNRPLFIDEANYFAGDTAMLDTLRDIHDVSNVPVILIGHEGTERKLIHRAQLARRISEWVEF
KPLDAEDARILADTVAEVAIADDLLAELHAHAKGSMGLMTVGLARVEAMAKANGWKRVDADQWAGRAFFLGNAPKSTNGR
G
>Mature_241_residues
MRQKLAGVKNVAALQAAFETLSNRDAGIPGMGLVHGFTGAGKTTAISWLVNRTNGVYARAYGTWTPNSMLGSIMHELGAA
PLQRSAQMLKYITGDLERTNRPLFIDEANYFAGDTAMLDTLRDIHDVSNVPVILIGHEGTERKLIHRAQLARRISEWVEF
KPLDAEDARILADTVAEVAIADDLLAELHAHAKGSMGLMTVGLARVEAMAKANGWKRVDADQWAGRAFFLGNAPKSTNGR
G

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26136; Mature: 26136

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQKLAGVKNVAALQAAFETLSNRDAGIPGMGLVHGFTGAGKTTAISWLVNRTNGVYARA
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHHEEECCCCEEEEE
YGTWTPNSMLGSIMHELGAAPLQRSAQMLKYITGDLERTNRPLFIDEANYFAGDTAMLDT
ECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHH
LRDIHDVSNVPVILIGHEGTERKLIHRAQLARRISEWVEFKPLDAEDARILADTVAEVAI
HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ADDLLAELHAHAKGSMGLMTVGLARVEAMAKANGWKRVDADQWAGRAFFLGNAPKSTNGR
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEECCCCCCCCCC
G
C
>Mature Secondary Structure
MRQKLAGVKNVAALQAAFETLSNRDAGIPGMGLVHGFTGAGKTTAISWLVNRTNGVYARA
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHHEEECCCCEEEEE
YGTWTPNSMLGSIMHELGAAPLQRSAQMLKYITGDLERTNRPLFIDEANYFAGDTAMLDT
ECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHH
LRDIHDVSNVPVILIGHEGTERKLIHRAQLARRISEWVEFKPLDAEDARILADTVAEVAI
HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ADDLLAELHAHAKGSMGLMTVGLARVEAMAKANGWKRVDADQWAGRAFFLGNAPKSTNGR
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEECCCCCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA