| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is queF
Identifier: 91789556
GI number: 91789556
Start: 3916504
End: 3917331
Strand: Reverse
Name: queF
Synonym: Bpro_3710
Alternate gene names: 91789556
Gene position: 3917331-3916504 (Counterclockwise)
Preceding gene: 91789557
Following gene: 91789555
Centisome position: 75.33
GC content: 60.39
Gene sequence:
>828_bases ATGAATACCCCTGAACACTCCCAACTCGGTAAGTCCTCGGCCTATGTTGACCAGTACGATGCCTCCTTGCTCTTTCCGAT CCCCCGTGCGGAAAAACGTGCCGAAATCGGCGTCACCGGAACACCGCCGTTTTTTGGCGCCGACATGTGGACCGCATTCG AGCTGAGCTGGCTCAATATGCGCGGCAAGCCGCAGGTGGCTTTGGCGCACATCACCGTGCCCTGCGAGTCGCCCAACATT GTCGAGAGCAAGTCCTTCAAGCTTTACCTGAACAGCTTCAATAACACGCGTTTTTCCGACGCGCGCGATGTGCGCGAGCG CATCCGCGCCGACATCAATGCAGCGGTGGGCGCTGGCGTGGGGGTTAAAACACTGGGGCCGGAACTGTTTGACCGCGAAC CCGTGCATGAGCTCGATGGCCTGAGCCTGGACCGGCTCGATGTGGAGTGCATCCACTTCACGCCGGCGCCGGAACTGTTA TTTGCAGAGTTCGACGAGCCGCCGGTCGATGAAACCCTGACCAGCAACCTGCTCAAAAGCAACTGCCTGGTGACCGGGCA GCCCGATTGGGGCAGTGTGCAGATCAGCTACTCGGGGCCACAAATCAACCAGGAAGGCCTGCTGCAATACCTGGTGAGCT TTCGCAACCACAACGAATTTCACGAGCAGTGCGTGGAGCGCATCTTCATGGACGTGTGGACGCGCTGCAGGCCGCTGAAG CTGTCGGTGTACGCCCGCTACACCCGCCGCGGAGGGCTGGACATCAACCCGTTTCGCACCAGCCATCCGCAAGCCCTGCC GGCCAATATCCGGATGGCGCGGCAGTAA
Upstream 100 bases:
>100_bases CTGTCCCTTTCTCTACGTAAAGGGGTCTTCGCTGGCCCGGTGCGGCCCTTCGCGGCGCGGTCAGCTACATTGATCAAGAT GATCAGAGAATTTACGACCC
Downstream 100 bases:
>100_bases GTTGCATTTGTGTATTGATTTGCACATGGGTTGGCCAACCTCGCAGTGCCGGGCATGGCCCGCGTGACTTCGCGCGTGTT GCGGTGCAGTAGACCAGGCC
Product: 7-cyano-7-deazaguanine reductase
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine reductase; NADPH-dependent nitrile oxidoreductase; PreQ(0) reductase
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MNTPEHSQLGKSSAYVDQYDASLLFPIPRAEKRAEIGVTGTPPFFGADMWTAFELSWLNMRGKPQVALAHITVPCESPNI VESKSFKLYLNSFNNTRFSDARDVRERIRADINAAVGAGVGVKTLGPELFDREPVHELDGLSLDRLDVECIHFTPAPELL FAEFDEPPVDETLTSNLLKSNCLVTGQPDWGSVQISYSGPQINQEGLLQYLVSFRNHNEFHEQCVERIFMDVWTRCRPLK LSVYARYTRRGGLDINPFRTSHPQALPANIRMARQ
Sequences:
>Translated_275_residues MNTPEHSQLGKSSAYVDQYDASLLFPIPRAEKRAEIGVTGTPPFFGADMWTAFELSWLNMRGKPQVALAHITVPCESPNI VESKSFKLYLNSFNNTRFSDARDVRERIRADINAAVGAGVGVKTLGPELFDREPVHELDGLSLDRLDVECIHFTPAPELL FAEFDEPPVDETLTSNLLKSNCLVTGQPDWGSVQISYSGPQINQEGLLQYLVSFRNHNEFHEQCVERIFMDVWTRCRPLK LSVYARYTRRGGLDINPFRTSHPQALPANIRMARQ >Mature_275_residues MNTPEHSQLGKSSAYVDQYDASLLFPIPRAEKRAEIGVTGTPPFFGADMWTAFELSWLNMRGKPQVALAHITVPCESPNI VESKSFKLYLNSFNNTRFSDARDVRERIRADINAAVGAGVGVKTLGPELFDREPVHELDGLSLDRLDVECIHFTPAPELL FAEFDEPPVDETLTSNLLKSNCLVTGQPDWGSVQISYSGPQINQEGLLQYLVSFRNHNEFHEQCVERIFMDVWTRCRPLK LSVYARYTRRGGLDINPFRTSHPQALPANIRMARQ
Specific function: Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
COG id: COG0780
COG function: function code R; Enzyme related to GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family. QueF type 2 subfamily
Homologues:
Organism=Escherichia coli, GI1789158, Length=269, Percent_Identity=50.9293680297398, Blast_Score=272, Evalue=2e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): QUEF_POLSJ (Q126D2)
Other databases:
- EMBL: CP000316 - RefSeq: YP_550508.1 - ProteinModelPortal: Q126D2 - SMR: Q126D2 - STRING: Q126D2 - GeneID: 4013621 - GenomeReviews: CP000316_GR - KEGG: pol:Bpro_3710 - NMPDR: fig|296591.1.peg.1628 - eggNOG: COG0780 - HOGENOM: HBG289139 - OMA: NPFRTSH - PhylomeDB: Q126D2 - ProtClustDB: PRK11792 - BioCyc: PSP296591:BPRO_3710-MONOMER - GO: GO:0005737 - HAMAP: MF_00817 - InterPro: IPR016428 - InterPro: IPR020602 - PIRSF: PIRSF004750 - TIGRFAMs: TIGR03138
Pfam domain/function: PF01227 GTP_cyclohydroI
EC number: =1.7.1.13
Molecular weight: Translated: 31053; Mature: 31053
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPEHSQLGKSSAYVDQYDASLLFPIPRAEKRAEIGVTGTPPFFGADMWTAFELSWLNM CCCCCCHHCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEECC RGKPQVALAHITVPCESPNIVESKSFKLYLNSFNNTRFSDARDVRERIRADINAAVGAGV CCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC GVKTLGPELFDREPVHELDGLSLDRLDVECIHFTPAPELLFAEFDEPPVDETLTSNLLKS CHHHCCHHHCCCCCHHHHCCCCCCCEEEEEEEECCCCCCEEECCCCCCCHHHHHHHHHHC NCLVTGQPDWGSVQISYSGPQINQEGLLQYLVSFRNHNEFHEQCVERIFMDVWTRCRPLK CCEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEE LSVYARYTRRGGLDINPFRTSHPQALPANIRMARQ EEEEEEEHHCCCCCCCCCCCCCCCCCCCCCEECCC >Mature Secondary Structure MNTPEHSQLGKSSAYVDQYDASLLFPIPRAEKRAEIGVTGTPPFFGADMWTAFELSWLNM CCCCCCHHCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEECC RGKPQVALAHITVPCESPNIVESKSFKLYLNSFNNTRFSDARDVRERIRADINAAVGAGV CCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC GVKTLGPELFDREPVHELDGLSLDRLDVECIHFTPAPELLFAEFDEPPVDETLTSNLLKS CHHHCCHHHCCCCCHHHHCCCCCCCEEEEEEEECCCCCCEEECCCCCCCHHHHHHHHHHC NCLVTGQPDWGSVQISYSGPQINQEGLLQYLVSFRNHNEFHEQCVERIFMDVWTRCRPLK CCEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEE LSVYARYTRRGGLDINPFRTSHPQALPANIRMARQ EEEEEEEHHCCCCCCCCCCCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA