| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789543
Identifier: 91789543
GI number: 91789543
Start: 3908282
End: 3908869
Strand: Reverse
Name: 91789543
Synonym: Bpro_3697
Alternate gene names: NA
Gene position: 3908869-3908282 (Counterclockwise)
Preceding gene: 91789544
Following gene: 91789541
Centisome position: 75.17
GC content: 63.1
Gene sequence:
>588_bases ATGTTCGTACTCAAGAATCTGTTTAGCACCGGGAAACGCTCAAAATCCGAGCCTGCCGGGCCGGAGACCACACCCGTCAA GATGAGTCTTGAGGAGCGCATGTGGTTCCGGCGAAAAATGCTGTATGAGGCCATCACGGTCACGATGCAGGCCCACGGCA TCCTGTCGGCCAGCTACCGGTTCCGTGTGGTGCGCAACGACAGGCGCGGCCACCGGTATTTGGTTCTGGTCGATCTGTCC ACCGACTTCCTGCACAACCGCGAAGGCCGTCCCGGGCAACTGGTCGTCCTGGGTGCGGCGATCACCAAAAATGCGGCTGC GCGGTACGGCATCACGGTGTCCGCTGTGTACTGGCAGGTCAACGACCAGATCCAGGGCTTCGAGACCAGCCGGCCTGATG CACAGCACAGTGGCGGCGGGACCGAGGCGCCGGGCCTGCCACTGCCGCACCGCAAGCGCGACCACCCCACGGCTGAAGAG TTTGCCGCCTTCGAGGCCGCCCGGCAGAAAGGGCATGAGCTGCAGCTCGGCAACCGTGTCTATTTATCCGACCTTGCACC GCTGGGCGGCGTTTCTGAAAGGGGGTGA
Upstream 100 bases:
>100_bases GGGCTGCGAGACCAAGGCCGACGCCGGCAAGCGCAGCAAGGAAGGCTATACGGCGGACTATGTTTTCTTTGCGGCGAAAT AGCCCTGATGCCATCCCAGC
Downstream 100 bases:
>100_bases TAGCTAGCGCTGATGGTGGAGCGGTCGATGCGTTAGAACAATTGATCGCTTGCCATCGATTCAATACCTTGTTGCCCTTG TTGCGGGCTTCCCGATCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MFVLKNLFSTGKRSKSEPAGPETTPVKMSLEERMWFRRKMLYEAITVTMQAHGILSASYRFRVVRNDRRGHRYLVLVDLS TDFLHNREGRPGQLVVLGAAITKNAAARYGITVSAVYWQVNDQIQGFETSRPDAQHSGGGTEAPGLPLPHRKRDHPTAEE FAAFEAARQKGHELQLGNRVYLSDLAPLGGVSERG
Sequences:
>Translated_195_residues MFVLKNLFSTGKRSKSEPAGPETTPVKMSLEERMWFRRKMLYEAITVTMQAHGILSASYRFRVVRNDRRGHRYLVLVDLS TDFLHNREGRPGQLVVLGAAITKNAAARYGITVSAVYWQVNDQIQGFETSRPDAQHSGGGTEAPGLPLPHRKRDHPTAEE FAAFEAARQKGHELQLGNRVYLSDLAPLGGVSERG >Mature_195_residues MFVLKNLFSTGKRSKSEPAGPETTPVKMSLEERMWFRRKMLYEAITVTMQAHGILSASYRFRVVRNDRRGHRYLVLVDLS TDFLHNREGRPGQLVVLGAAITKNAAARYGITVSAVYWQVNDQIQGFETSRPDAQHSGGGTEAPGLPLPHRKRDHPTAEE FAAFEAARQKGHELQLGNRVYLSDLAPLGGVSERG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21775; Mature: 21775
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVLKNLFSTGKRSKSEPAGPETTPVKMSLEERMWFRRKMLYEAITVTMQAHGILSASYR CCHHHHHHHCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCEEECCEE FRVVRNDRRGHRYLVLVDLSTDFLHNREGRPGQLVVLGAAITKNAAARYGITVSAVYWQV EEEEECCCCCCEEEEEEECCHHHHHCCCCCCCEEEEEECCHHCCCHHHCCEEEEEEEEEE NDQIQGFETSRPDAQHSGGGTEAPGLPLPHRKRDHPTAEEFAAFEAARQKGHELQLGNRV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCEE YLSDLAPLGGVSERG EEECCCCCCCCCCCC >Mature Secondary Structure MFVLKNLFSTGKRSKSEPAGPETTPVKMSLEERMWFRRKMLYEAITVTMQAHGILSASYR CCHHHHHHHCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCEEECCEE FRVVRNDRRGHRYLVLVDLSTDFLHNREGRPGQLVVLGAAITKNAAARYGITVSAVYWQV EEEEECCCCCCEEEEEEECCHHHHHCCCCCCCEEEEEECCHHCCCHHHCCEEEEEEEEEE NDQIQGFETSRPDAQHSGGGTEAPGLPLPHRKRDHPTAEEFAAFEAARQKGHELQLGNRV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCEE YLSDLAPLGGVSERG EEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA