Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789541

Identifier: 91789541

GI number: 91789541

Start: 3905835

End: 3906731

Strand: Reverse

Name: 91789541

Synonym: Bpro_3695

Alternate gene names: NA

Gene position: 3906731-3905835 (Counterclockwise)

Preceding gene: 91789543

Following gene: 91789539

Centisome position: 75.13

GC content: 65.11

Gene sequence:

>897_bases
ATGAAACGCTGGATTAAATGGAGCGCTGCCGGCCTGGGCTTGGCCGTACTGCTGGTCGCGGGTGCGGCCGTGGTGGGCAC
GCAGCTGGCCGAGCGAAAACGCATGCGCCAGGTGAGTGTGCCGGTGCAACCCGTGGCGTACGTCTCGGATGCCCAGGCGC
TGGAGCGCGGCAAGTATTTATTCCAGTCGCGCGGTTGCGTTGACTGCCATGGCGTGAACGGGGGCGGGCGCGACTTTGTC
AATGACGGCAAAGGCACGCGCATCGCCGGACCCAATATCACGCCTGGCGGTGTGGTGGCCGGGTACAAGCCCGAAGACTG
GGTTCGCACGATACGCCATGGGGTCAAACCCGATGGGCACCCGGCGCTGATCATGCCCAGTGAGGACTACAACCGCTTCA
CCAACGAAGACCTGGCCGCATTGGTGGCGTATGTGCGCAGCTTGCCGCCACAAAATCCCCGTGCCGCGGTGATCGAACTG
CCCTTGCCAGCCTGGGTGCTCTACGGCTTTGACGCCATTCCCGATGCGGCGCAACGGATTGACCACTCGCTGCCGCCCTC
AACCCCGGTGGCGGCTGCCGTGACGGTGCAGCATGGCGCCTATGTGGCCAATATGTGCATCGGTTGCCATGGCGAGAAGC
TGTCCGGCGGGAAGATTCCCGGTGGCCCCCCGGACTGGCCGGCGGCCGCCAACATCACGCCCGGCGAGGGCAGTGCCATG
GGGCGTTACAAGGATGCAGCGCAGTTCATGGCCATGATGCGCAGCGGCAAACGGCCTGACGGCACAGCCATCCAGGTGAT
GCCGTTTGGATCGCTGTCGGCCATGAACGATGTCGATACCCGAGCGCTGCACGCTTACCTGCAAACGGTGCCGGCCCGAC
CTGCGGGCCAGCGTTAG

Upstream 100 bases:

>100_bases
CACTGACAAAAAATCCGCGGCTGCCTAAACTGCCCGATTTGCCTGCGACGATGCGGCCCGGTGGTGGCGCGCCATCGAGG
CTAATGGAGGGGGAAATACA

Downstream 100 bases:

>100_bases
GCAGGACTTCGCTTGGCGAAGCCTGCCATGACTCATGAGCAGGTGCCCTGAGCGCCCAAGGCCTTGGCCTTGAGCACGTC
TTGTCCCGAGCGGATGCCAC

Product: class I cytochrome c

Products: NA

Alternate protein names: Cytochrome C Class I; Cytochrome C-Related Protein; Di-Heme Cytochrome C-Signal Peptide; Class I Diheme Cytochrome C; Gluconate 2-Dehydrogenase Cytochrome Subunit C; Membrane-Bound Alcohol Dehydrogenase Cytochromec Subunit; Diheme Cytochrome C-Type; Cytochrome C

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MKRWIKWSAAGLGLAVLLVAGAAVVGTQLAERKRMRQVSVPVQPVAYVSDAQALERGKYLFQSRGCVDCHGVNGGGRDFV
NDGKGTRIAGPNITPGGVVAGYKPEDWVRTIRHGVKPDGHPALIMPSEDYNRFTNEDLAALVAYVRSLPPQNPRAAVIEL
PLPAWVLYGFDAIPDAAQRIDHSLPPSTPVAAAVTVQHGAYVANMCIGCHGEKLSGGKIPGGPPDWPAAANITPGEGSAM
GRYKDAAQFMAMMRSGKRPDGTAIQVMPFGSLSAMNDVDTRALHAYLQTVPARPAGQR

Sequences:

>Translated_298_residues
MKRWIKWSAAGLGLAVLLVAGAAVVGTQLAERKRMRQVSVPVQPVAYVSDAQALERGKYLFQSRGCVDCHGVNGGGRDFV
NDGKGTRIAGPNITPGGVVAGYKPEDWVRTIRHGVKPDGHPALIMPSEDYNRFTNEDLAALVAYVRSLPPQNPRAAVIEL
PLPAWVLYGFDAIPDAAQRIDHSLPPSTPVAAAVTVQHGAYVANMCIGCHGEKLSGGKIPGGPPDWPAAANITPGEGSAM
GRYKDAAQFMAMMRSGKRPDGTAIQVMPFGSLSAMNDVDTRALHAYLQTVPARPAGQR
>Mature_298_residues
MKRWIKWSAAGLGLAVLLVAGAAVVGTQLAERKRMRQVSVPVQPVAYVSDAQALERGKYLFQSRGCVDCHGVNGGGRDFV
NDGKGTRIAGPNITPGGVVAGYKPEDWVRTIRHGVKPDGHPALIMPSEDYNRFTNEDLAALVAYVRSLPPQNPRAAVIEL
PLPAWVLYGFDAIPDAAQRIDHSLPPSTPVAAAVTVQHGAYVANMCIGCHGEKLSGGKIPGGPPDWPAAANITPGEGSAM
GRYKDAAQFMAMMRSGKRPDGTAIQVMPFGSLSAMNDVDTRALHAYLQTVPARPAGQR

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31638; Mature: 31638

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRWIKWSAAGLGLAVLLVAGAAVVGTQLAERKRMRQVSVPVQPVAYVSDAQALERGKYL
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
FQSRGCVDCHGVNGGGRDFVNDGKGTRIAGPNITPGGVVAGYKPEDWVRTIRHGVKPDGH
HHCCCCEEEECCCCCCCCCCCCCCCCEECCCCCCCCCEEECCCCHHHHHHHHHCCCCCCC
PALIMPSEDYNRFTNEDLAALVAYVRSLPPQNPRAAVIELPLPAWVLYGFDAIPDAAQRI
CEEEECCCHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHCCCCCCHHHHHH
DHSLPPSTPVAAAVTVQHGAYVANMCIGCHGEKLSGGKIPGGPPDWPAAANITPGEGSAM
HCCCCCCCCCEEEEEECCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GRYKDAAQFMAMMRSGKRPDGTAIQVMPFGSLSAMNDVDTRALHAYLQTVPARPAGQR
CHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKRWIKWSAAGLGLAVLLVAGAAVVGTQLAERKRMRQVSVPVQPVAYVSDAQALERGKYL
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
FQSRGCVDCHGVNGGGRDFVNDGKGTRIAGPNITPGGVVAGYKPEDWVRTIRHGVKPDGH
HHCCCCEEEECCCCCCCCCCCCCCCCEECCCCCCCCCEEECCCCHHHHHHHHHCCCCCCC
PALIMPSEDYNRFTNEDLAALVAYVRSLPPQNPRAAVIELPLPAWVLYGFDAIPDAAQRI
CEEEECCCHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHCCCCCCHHHHHH
DHSLPPSTPVAAAVTVQHGAYVANMCIGCHGEKLSGGKIPGGPPDWPAAANITPGEGSAM
HCCCCCCCCCEEEEEECCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GRYKDAAQFMAMMRSGKRPDGTAIQVMPFGSLSAMNDVDTRALHAYLQTVPARPAGQR
CHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA