| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yehU [H]
Identifier: 91789519
GI number: 91789519
Start: 3881210
End: 3882268
Strand: Reverse
Name: yehU [H]
Synonym: Bpro_3671
Alternate gene names: 91789519
Gene position: 3882268-3881210 (Counterclockwise)
Preceding gene: 91789526
Following gene: 91789518
Centisome position: 74.66
GC content: 67.14
Gene sequence:
>1059_bases ATGAAGCCTTTGCCTGATCCACAGACCTTCGGGGAGTCCACGTTGCTGGGAAGCTTTATTCCGGGCGACGAAGAAGCGGT GCCGCCGGCGCGCGCCAGCATGTTTGACGCCTGCCATGTCGGGGTGGTGCTGCGCGCGGTGCTGTTTGTGGAGGCTGTGG CGGGGGTTGGCGCCATGTTTGGTGCCAACCATCCGGTGGACTGGCTGCTACGGTTTGCGCTGCTGACCGGCGGGGTGTTG CCCGCCACACTGGCCTGGCTGATCGCCATTTGCGCGCTCAAGTCGCGGCTGAACCGGCTGGATACCTCGTCGCAGTGGCT GGCCGGCATGGCGCTGGGGGCGGCGGCCGGGCTCTATGGCTGCGGTCTGCTGGCGCTGATAGGGCTGCTGCAGCCGGCGC CATGGTGGGCCAGCGCCGCCTCGGGCGCCCTGCTGTCGGCCATGGTGCTGGCGGGTTTGTTCTGGCGTGCCAAGGCGCGC ACGCCGGCAGCCACGGCCGCGCGGCTGGCCGAGCTGCAGTCACGCATCCGGCCGCATTTTTTGTTCAACACACTCAACAG CGCCATTGCGCTGGTGCGTGCCGAGCCGGCCAAGGCCGAGGCGGTGCTGGAAGACCTGAGCGAGCTGTTTCGCCATGCGC TGGCCGATCCGGCCGAGTCGGTCACGCTGGGGCAGGCAATTGCGCTGGCCCAGCGCTACCTGGCGATTGAGCAGGTCCGC TTTGGTGATCGCCTGCAGGTGCAGTGGAGCCTGGACGCCGGCGCCGATGAGGCCAAACTGCCGCCGCTGCTGCTCCAGCC GCTGGTGGAAAACGCCGTCAGGCACGGCGTGGAGCCCAGCGCCAGCGGGGCGCAACTCCGGATAAGCACCCTCAGGCGCG GCGGCAAGGTGGTGATCAAGGTGACCAATTCGACGCCGGCCGGAGTGGGGGAGCGCGGCAACGGACTGGCACTTGCCAAT GTGCGCGAGCGCCTGGTTTTGCTGCATGATGTGCAGGCACAGTTCAAGACCGTCTTCAAGGATGGCGTATTTCAGGTCAG GCTGGAGATTCCTGCATGA
Upstream 100 bases:
>100_bases ACTCATTTCCGGTGATTTTATCTGTGACTGACCGCCATGCGCGTCCCGCGACAAGACACTGCCATAAACCCGAATAACCC CGAGAACGTCCGCACAACCG
Downstream 100 bases:
>100_bases AACTCAAGGTACTGCTGGTTGATGATGAAGCACTCGCCCGCTCGCGCCTGCGCACCCTGCTGGGCGACTGCACGGCACCG CAGGCGGTGGTGGCTGCTGA
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MKPLPDPQTFGESTLLGSFIPGDEEAVPPARASMFDACHVGVVLRAVLFVEAVAGVGAMFGANHPVDWLLRFALLTGGVL PATLAWLIAICALKSRLNRLDTSSQWLAGMALGAAAGLYGCGLLALIGLLQPAPWWASAASGALLSAMVLAGLFWRAKAR TPAATAARLAELQSRIRPHFLFNTLNSAIALVRAEPAKAEAVLEDLSELFRHALADPAESVTLGQAIALAQRYLAIEQVR FGDRLQVQWSLDAGADEAKLPPLLLQPLVENAVRHGVEPSASGAQLRISTLRRGGKVVIKVTNSTPAGVGERGNGLALAN VRERLVLLHDVQAQFKTVFKDGVFQVRLEIPA
Sequences:
>Translated_352_residues MKPLPDPQTFGESTLLGSFIPGDEEAVPPARASMFDACHVGVVLRAVLFVEAVAGVGAMFGANHPVDWLLRFALLTGGVL PATLAWLIAICALKSRLNRLDTSSQWLAGMALGAAAGLYGCGLLALIGLLQPAPWWASAASGALLSAMVLAGLFWRAKAR TPAATAARLAELQSRIRPHFLFNTLNSAIALVRAEPAKAEAVLEDLSELFRHALADPAESVTLGQAIALAQRYLAIEQVR FGDRLQVQWSLDAGADEAKLPPLLLQPLVENAVRHGVEPSASGAQLRISTLRRGGKVVIKVTNSTPAGVGERGNGLALAN VRERLVLLHDVQAQFKTVFKDGVFQVRLEIPA >Mature_352_residues MKPLPDPQTFGESTLLGSFIPGDEEAVPPARASMFDACHVGVVLRAVLFVEAVAGVGAMFGANHPVDWLLRFALLTGGVL PATLAWLIAICALKSRLNRLDTSSQWLAGMALGAAAGLYGCGLLALIGLLQPAPWWASAASGALLSAMVLAGLFWRAKAR TPAATAARLAELQSRIRPHFLFNTLNSAIALVRAEPAKAEAVLEDLSELFRHALADPAESVTLGQAIALAQRYLAIEQVR FGDRLQVQWSLDAGADEAKLPPLLLQPLVENAVRHGVEPSASGAQLRISTLRRGGKVVIKVTNSTPAGVGERGNGLALAN VRERLVLLHDVQAQFKTVFKDGVFQVRLEIPA
Specific function: Unknown
COG id: COG2972
COG function: function code T; Predicted signal transduction protein with a C-terminal ATPase domain
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788446, Length=185, Percent_Identity=35.6756756756757, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1788723, Length=185, Percent_Identity=35.6756756756757, Blast_Score=110, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003018 - InterPro: IPR010559 - InterPro: IPR011620 [H]
Pfam domain/function: PF07694 5TM-5TMR_LYT; PF02518 HATPase_c; PF06580 His_kinase [H]
EC number: NA
Molecular weight: Translated: 37357; Mature: 37357
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLPDPQTFGESTLLGSFIPGDEEAVPPARASMFDACHVGVVLRAVLFVEAVAGVGAMF CCCCCCCHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GANHPVDWLLRFALLTGGVLPATLAWLIAICALKSRLNRLDTSSQWLAGMALGAAAGLYG CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH CGLLALIGLLQPAPWWASAASGALLSAMVLAGLFWRAKARTPAATAARLAELQSRIRPHF HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHH LFNTLNSAIALVRAEPAKAEAVLEDLSELFRHALADPAESVTLGQAIALAQRYLAIEQVR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC FGDRLQVQWSLDAGADEAKLPPLLLQPLVENAVRHGVEPSASGAQLRISTLRRGGKVVIK CCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHCCCEEEEE VTNSTPAGVGERGNGLALANVRERLVLLHDVQAQFKTVFKDGVFQVRLEIPA ECCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC >Mature Secondary Structure MKPLPDPQTFGESTLLGSFIPGDEEAVPPARASMFDACHVGVVLRAVLFVEAVAGVGAMF CCCCCCCHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GANHPVDWLLRFALLTGGVLPATLAWLIAICALKSRLNRLDTSSQWLAGMALGAAAGLYG CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH CGLLALIGLLQPAPWWASAASGALLSAMVLAGLFWRAKARTPAATAARLAELQSRIRPHF HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHH LFNTLNSAIALVRAEPAKAEAVLEDLSELFRHALADPAESVTLGQAIALAQRYLAIEQVR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC FGDRLQVQWSLDAGADEAKLPPLLLQPLVENAVRHGVEPSASGAQLRISTLRRGGKVVIK CCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHCCCEEEEE VTNSTPAGVGERGNGLALANVRERLVLLHDVQAQFKTVFKDGVFQVRLEIPA ECCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]