| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91789486
Identifier: 91789486
GI number: 91789486
Start: 3837351
End: 3837692
Strand: Reverse
Name: 91789486
Synonym: Bpro_3636
Alternate gene names: NA
Gene position: 3837692-3837351 (Counterclockwise)
Preceding gene: 91789487
Following gene: 91789485
Centisome position: 73.8
GC content: 51.46
Gene sequence:
>342_bases ATGAAACATCAGCAACGTGGCATGTCCTTCATTGGTATTTTGTTTGTCGGCGGCGTCATCGGTTGCGCTGGTATCCTGGC GGCCCAAGTTTTGCCAACTTTGATTGAATTTCAGGCCATCAACAAAGCTGCCAGCAAGGCCAGGGAAGGCAATACGGTGG CTGAAGTGAAGTCCATTTTTGACAAAGCCGCGGCGATTGACGACATCAAATCGATTACCGGCAAGGACCTTGAGATCACG AAAGAGGGCGACAAGACCGTGGTGGCTTTCGCCTATACCCGTGAAATCCACATGGCAGGTCCCGCTTACCTGCTGCTGAA GTACAACGGCCGATCCAAATAA
Upstream 100 bases:
>100_bases AACGCATCGGTTCTTTTCAGTAATTGCGGCACGGCGTAGGCGCTCCGGGGGTGATCAAGCGGTCACCCGCGGGGGCCACC CTGCCAGAGCAGGAGAAAAA
Downstream 100 bases:
>100_bases GTGAGAGCCAGCGCCACCTCAAGCCCAGACCTGCTGGCACTGCAAAAACGCCTGCAGCACGAGTTTTCCAATCCGAAACT GCTGGCGCAGGCGCTCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MKHQQRGMSFIGILFVGGVIGCAGILAAQVLPTLIEFQAINKAASKAREGNTVAEVKSIFDKAAAIDDIKSITGKDLEIT KEGDKTVVAFAYTREIHMAGPAYLLLKYNGRSK
Sequences:
>Translated_113_residues MKHQQRGMSFIGILFVGGVIGCAGILAAQVLPTLIEFQAINKAASKAREGNTVAEVKSIFDKAAAIDDIKSITGKDLEIT KEGDKTVVAFAYTREIHMAGPAYLLLKYNGRSK >Mature_113_residues MKHQQRGMSFIGILFVGGVIGCAGILAAQVLPTLIEFQAINKAASKAREGNTVAEVKSIFDKAAAIDDIKSITGKDLEIT KEGDKTVVAFAYTREIHMAGPAYLLLKYNGRSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12141; Mature: 12141
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHQQRGMSFIGILFVGGVIGCAGILAAQVLPTLIEFQAINKAASKAREGNTVAEVKSIF CCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH DKAAAIDDIKSITGKDLEITKEGDKTVVAFAYTREIHMAGPAYLLLKYNGRSK HHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEEEEECCCCEEEEEEECCCCC >Mature Secondary Structure MKHQQRGMSFIGILFVGGVIGCAGILAAQVLPTLIEFQAINKAASKAREGNTVAEVKSIF CCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH DKAAAIDDIKSITGKDLEITKEGDKTVVAFAYTREIHMAGPAYLLLKYNGRSK HHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEEEEECCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA