| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is ygjP [H]
Identifier: 91789473
GI number: 91789473
Start: 3826270
End: 3826797
Strand: Direct
Name: ygjP [H]
Synonym: Bpro_3622
Alternate gene names: 91789473
Gene position: 3826270-3826797 (Clockwise)
Preceding gene: 91789471
Following gene: 91789504
Centisome position: 73.58
GC content: 56.63
Gene sequence:
>528_bases ATGAATCCTGTCGGCCATCCGATGAAATACCTCTCGGGCTACCCTGACAGCCTCAAAGCCCAGGTACAGCAACTCTTGGC ACAAGACCGTCTGGGCGACATGCTGCTCACGAAGTACCCACGGGCGCACGACGTACGCACCGACAAGGCCTTGTACGACT ACGTGATGGACCTCAAAAACACGTTTTTACGCAATGCCGAGCCGCTCAGCAAAGTGGCTTTTGACAGCAAGCTGCACGTG ATTGCCCACGCGCTGGGGACGCACACGGCCATCTCAAGGGTTCAGGGCAGCAAGCTCAAGGCCAAACGTGAAATACGCGT GGCCACGCTATTCAAGGAAGTGCCTGCGGAGTTCCTGAAGATGATTGCGGTGCACGAGCTGGCCCACATCAAGGAAAAGG CGCACGACAAAGCCTTCTATCAGCTCTGCACCTATATGGAGCCGCAGTACCACCAGTACGAATTTGATTTGCGGGTTTAT CTCACGCACGTTGACGTGGCGGGCAAGCTGGACTGGCCAGCGGCCTAG
Upstream 100 bases:
>100_bases AGGAGGCTTCCCCCGCATCCGGGAAACACCTGCGCTTTCCGGGCTGTCAGGCATCCGGCTTCCTGTCGGCAAACGTCGTT GGCCATCAAATCAATAGCAA
Downstream 100 bases:
>100_bases CTGATAGCAAATGTTCAGCGTTTCCACGAGGCAAGCCGAGACAAGCGTTCAAAAGCCAGGTCGGTCACCACGGCCAGCAT CCCCACCAGCACCGCTCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MNPVGHPMKYLSGYPDSLKAQVQQLLAQDRLGDMLLTKYPRAHDVRTDKALYDYVMDLKNTFLRNAEPLSKVAFDSKLHV IAHALGTHTAISRVQGSKLKAKREIRVATLFKEVPAEFLKMIAVHELAHIKEKAHDKAFYQLCTYMEPQYHQYEFDLRVY LTHVDVAGKLDWPAA
Sequences:
>Translated_175_residues MNPVGHPMKYLSGYPDSLKAQVQQLLAQDRLGDMLLTKYPRAHDVRTDKALYDYVMDLKNTFLRNAEPLSKVAFDSKLHV IAHALGTHTAISRVQGSKLKAKREIRVATLFKEVPAEFLKMIAVHELAHIKEKAHDKAFYQLCTYMEPQYHQYEFDLRVY LTHVDVAGKLDWPAA >Mature_175_residues MNPVGHPMKYLSGYPDSLKAQVQQLLAQDRLGDMLLTKYPRAHDVRTDKALYDYVMDLKNTFLRNAEPLSKVAFDSKLHV IAHALGTHTAISRVQGSKLKAKREIRVATLFKEVPAEFLKMIAVHELAHIKEKAHDKAFYQLCTYMEPQYHQYEFDLRVY LTHVDVAGKLDWPAA
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082207, Length=160, Percent_Identity=61.25, Blast_Score=216, Evalue=5e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002725 [H]
Pfam domain/function: PF01863 DUF45 [H]
EC number: NA
Molecular weight: Translated: 20095; Mature: 20095
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPVGHPMKYLSGYPDSLKAQVQQLLAQDRLGDMLLTKYPRAHDVRTDKALYDYVMDLKN CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH TFLRNAEPLSKVAFDSKLHVIAHALGTHTAISRVQGSKLKAKREIRVATLFKEVPAEFLK HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH MIAVHELAHIKEKAHDKAFYQLCTYMEPQYHQYEFDLRVYLTHVDVAGKLDWPAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCCCCCC >Mature Secondary Structure MNPVGHPMKYLSGYPDSLKAQVQQLLAQDRLGDMLLTKYPRAHDVRTDKALYDYVMDLKN CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH TFLRNAEPLSKVAFDSKLHVIAHALGTHTAISRVQGSKLKAKREIRVATLFKEVPAEFLK HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH MIAVHELAHIKEKAHDKAFYQLCTYMEPQYHQYEFDLRVYLTHVDVAGKLDWPAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]