Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ygjP [H]

Identifier: 91789473

GI number: 91789473

Start: 3826270

End: 3826797

Strand: Direct

Name: ygjP [H]

Synonym: Bpro_3622

Alternate gene names: 91789473

Gene position: 3826270-3826797 (Clockwise)

Preceding gene: 91789471

Following gene: 91789504

Centisome position: 73.58

GC content: 56.63

Gene sequence:

>528_bases
ATGAATCCTGTCGGCCATCCGATGAAATACCTCTCGGGCTACCCTGACAGCCTCAAAGCCCAGGTACAGCAACTCTTGGC
ACAAGACCGTCTGGGCGACATGCTGCTCACGAAGTACCCACGGGCGCACGACGTACGCACCGACAAGGCCTTGTACGACT
ACGTGATGGACCTCAAAAACACGTTTTTACGCAATGCCGAGCCGCTCAGCAAAGTGGCTTTTGACAGCAAGCTGCACGTG
ATTGCCCACGCGCTGGGGACGCACACGGCCATCTCAAGGGTTCAGGGCAGCAAGCTCAAGGCCAAACGTGAAATACGCGT
GGCCACGCTATTCAAGGAAGTGCCTGCGGAGTTCCTGAAGATGATTGCGGTGCACGAGCTGGCCCACATCAAGGAAAAGG
CGCACGACAAAGCCTTCTATCAGCTCTGCACCTATATGGAGCCGCAGTACCACCAGTACGAATTTGATTTGCGGGTTTAT
CTCACGCACGTTGACGTGGCGGGCAAGCTGGACTGGCCAGCGGCCTAG

Upstream 100 bases:

>100_bases
AGGAGGCTTCCCCCGCATCCGGGAAACACCTGCGCTTTCCGGGCTGTCAGGCATCCGGCTTCCTGTCGGCAAACGTCGTT
GGCCATCAAATCAATAGCAA

Downstream 100 bases:

>100_bases
CTGATAGCAAATGTTCAGCGTTTCCACGAGGCAAGCCGAGACAAGCGTTCAAAAGCCAGGTCGGTCACCACGGCCAGCAT
CCCCACCAGCACCGCTCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MNPVGHPMKYLSGYPDSLKAQVQQLLAQDRLGDMLLTKYPRAHDVRTDKALYDYVMDLKNTFLRNAEPLSKVAFDSKLHV
IAHALGTHTAISRVQGSKLKAKREIRVATLFKEVPAEFLKMIAVHELAHIKEKAHDKAFYQLCTYMEPQYHQYEFDLRVY
LTHVDVAGKLDWPAA

Sequences:

>Translated_175_residues
MNPVGHPMKYLSGYPDSLKAQVQQLLAQDRLGDMLLTKYPRAHDVRTDKALYDYVMDLKNTFLRNAEPLSKVAFDSKLHV
IAHALGTHTAISRVQGSKLKAKREIRVATLFKEVPAEFLKMIAVHELAHIKEKAHDKAFYQLCTYMEPQYHQYEFDLRVY
LTHVDVAGKLDWPAA
>Mature_175_residues
MNPVGHPMKYLSGYPDSLKAQVQQLLAQDRLGDMLLTKYPRAHDVRTDKALYDYVMDLKNTFLRNAEPLSKVAFDSKLHV
IAHALGTHTAISRVQGSKLKAKREIRVATLFKEVPAEFLKMIAVHELAHIKEKAHDKAFYQLCTYMEPQYHQYEFDLRVY
LTHVDVAGKLDWPAA

Specific function: Unknown

COG id: COG1451

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082207, Length=160, Percent_Identity=61.25, Blast_Score=216, Evalue=5e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002725 [H]

Pfam domain/function: PF01863 DUF45 [H]

EC number: NA

Molecular weight: Translated: 20095; Mature: 20095

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPVGHPMKYLSGYPDSLKAQVQQLLAQDRLGDMLLTKYPRAHDVRTDKALYDYVMDLKN
CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
TFLRNAEPLSKVAFDSKLHVIAHALGTHTAISRVQGSKLKAKREIRVATLFKEVPAEFLK
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
MIAVHELAHIKEKAHDKAFYQLCTYMEPQYHQYEFDLRVYLTHVDVAGKLDWPAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MNPVGHPMKYLSGYPDSLKAQVQQLLAQDRLGDMLLTKYPRAHDVRTDKALYDYVMDLKN
CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
TFLRNAEPLSKVAFDSKLHVIAHALGTHTAISRVQGSKLKAKREIRVATLFKEVPAEFLK
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
MIAVHELAHIKEKAHDKAFYQLCTYMEPQYHQYEFDLRVYLTHVDVAGKLDWPAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]