Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789472

Identifier: 91789472

GI number: 91789472

Start: 3824766

End: 3826100

Strand: Reverse

Name: 91789472

Synonym: Bpro_3621

Alternate gene names: NA

Gene position: 3826100-3824766 (Counterclockwise)

Preceding gene: 91789474

Following gene: 91789462

Centisome position: 73.58

GC content: 61.12

Gene sequence:

>1335_bases
ATGAACAACGTCACAACCATTGCACCCTGTCGCGTCAACCTGGCTTTGCAGGGCGGTGGCTCGCACGGCGCCTTCACATG
GGGCGTGCTCGACGCGCTGCTCGAAGACGGGCGCATCGATATCGAGGGAATGAGCGGCACCAGCGCAGGGGCCATGAATG
CGGTGGCGCTGGCGCATGGTTTTGCCGGTGCCGAGGGAAAATCCAGAGTGCAGCAGCATGACGCAGCACGCGAAGCGCTG
GCCAGCTTCTGGAACGGCATCGTCAACATGGGCGCGCTGTCGTCATCGATGTCCAAAATGCAGCGCGCTCCGTTTGACAT
CCTGTTCGGCCACATGACGATGGGGACGTCTGCGGGACCGTCCAGGTTATGGACCGATGCCATGACCCGCTACTGGGCCA
ATACGCTGTCGCCTTACCAGAGCAACCCCTTTGACATCAACCCCCTCAGGAAATTCCTGGAAGGCCAGGTCGATTTCGAA
CGGCTGGCGGCTGCCCGTGACCCCGGTACGCCCAAGGTATTTGTGGTGGCCACGCGCGTCAGCAGCGGCAAGGCCGAGGT
GTTTTCAGGCAAACGCCTGACGGCCAGTGCCGTGATGGCATCGGCCTGCCTGCCGATGGTGTTCCAGGCGGTGGAGATTG
AAGGCAGTCATTTCTGGGACGGTGGTTATTCGGGTAATCCTGCGATCCATCCACTGATTTACCACTGCAACAGCCGCGAT
ATCGTGCTGGTGCAGATCAATCCCATCAAGCGCGAGTCGCTGCCGACCAACGCGAACGAGATCATGGACCGCATCAATGA
AATCACCTTCAATGCCGGGTTGATTGCCGAGATGCGTGCCATTGATTTCGTCAAGCGCCTGCTGGCCGAAGGCAAGCTCG
ATCCGGGGCATTACAAGAATGTGCTGATGCACCGGGTGGACGGTGGCGAGGCGCTTGAGCGGTTCACGGCCTCGACCAAG
TCATCGACCGAGGCCAGCCTGATTCACGGTCTGCGTGACCTGGGCGTCCGGTGCGGCAAGGAGTGGCTGGACAAGCACTA
CCCGGCGCTGGGCGTGAAGGACAGTGTGAACATTGCGCGGGATTATCTTGATGATTTGCGCATGCCGGTGACGAATGCGA
ATGGGCAGCCGGCGCACCCGGAACGCCCGCAAGCCGTAGAGGCCAGCGAGCGCGGCAAGCCGGCAACCTTGCCTCCAGTA
TCAACGGGTGCCGTCAAGGTATCGGCACCAGTACAGGCCCCCGCGCCTGCACCCGCAGCACGCAAGACCGTGCGCCACAA
AATCCGCTCTGTTCTGGACAACTACCTGCACAAGCTCAAAAAGCGCAAGGGCTGA

Upstream 100 bases:

>100_bases
AGGTGTTTCCCGGATGCGGGGGAAGCCTCCTGATTTTAGTCGTGTGGCTGCCAAGACGCGTGTGGCGGGCGCTGACACCA
TTTTTTGCTAACCTTGGCCC

Downstream 100 bases:

>100_bases
ACCGGGTCCGGCCTGTCCGGCGTGTTGCCTGCGCAGGCGCGCCCCTGCGGCGCGCTTACGCTTCGCGGCGTAGCGCGGGG
AACAAGATCACATCGCGAAT

Product: patatin

Products: NA

Alternate protein names: Alpha-Beta Hydrolase Family Esterase; Patatin-Like Phospholipase; Patatin Family Phospholipase; Phospholipase Patatin Family; Transmembrane Protein; Esterase Of Alpha-Beta Hydrolase Superfamily; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Serine Protease; Patatin-Like Phospholipase Domain-Containing Protein; FabD/Lysophospholipase-Like Esterase; FabD/Lysophospholipase-Like Protein; Patatin-Like Phospholipase Family; FabD/Lysophospholipase; Esterase; Dehydrogenase/Reductase; Alpha/Beta Fold Family Hydrolase; Phospholipase Patatin Family Protein; Phospholipase

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MNNVTTIAPCRVNLALQGGGSHGAFTWGVLDALLEDGRIDIEGMSGTSAGAMNAVALAHGFAGAEGKSRVQQHDAAREAL
ASFWNGIVNMGALSSSMSKMQRAPFDILFGHMTMGTSAGPSRLWTDAMTRYWANTLSPYQSNPFDINPLRKFLEGQVDFE
RLAAARDPGTPKVFVVATRVSSGKAEVFSGKRLTASAVMASACLPMVFQAVEIEGSHFWDGGYSGNPAIHPLIYHCNSRD
IVLVQINPIKRESLPTNANEIMDRINEITFNAGLIAEMRAIDFVKRLLAEGKLDPGHYKNVLMHRVDGGEALERFTASTK
SSTEASLIHGLRDLGVRCGKEWLDKHYPALGVKDSVNIARDYLDDLRMPVTNANGQPAHPERPQAVEASERGKPATLPPV
STGAVKVSAPVQAPAPAPAARKTVRHKIRSVLDNYLHKLKKRKG

Sequences:

>Translated_444_residues
MNNVTTIAPCRVNLALQGGGSHGAFTWGVLDALLEDGRIDIEGMSGTSAGAMNAVALAHGFAGAEGKSRVQQHDAAREAL
ASFWNGIVNMGALSSSMSKMQRAPFDILFGHMTMGTSAGPSRLWTDAMTRYWANTLSPYQSNPFDINPLRKFLEGQVDFE
RLAAARDPGTPKVFVVATRVSSGKAEVFSGKRLTASAVMASACLPMVFQAVEIEGSHFWDGGYSGNPAIHPLIYHCNSRD
IVLVQINPIKRESLPTNANEIMDRINEITFNAGLIAEMRAIDFVKRLLAEGKLDPGHYKNVLMHRVDGGEALERFTASTK
SSTEASLIHGLRDLGVRCGKEWLDKHYPALGVKDSVNIARDYLDDLRMPVTNANGQPAHPERPQAVEASERGKPATLPPV
STGAVKVSAPVQAPAPAPAARKTVRHKIRSVLDNYLHKLKKRKG
>Mature_444_residues
MNNVTTIAPCRVNLALQGGGSHGAFTWGVLDALLEDGRIDIEGMSGTSAGAMNAVALAHGFAGAEGKSRVQQHDAAREAL
ASFWNGIVNMGALSSSMSKMQRAPFDILFGHMTMGTSAGPSRLWTDAMTRYWANTLSPYQSNPFDINPLRKFLEGQVDFE
RLAAARDPGTPKVFVVATRVSSGKAEVFSGKRLTASAVMASACLPMVFQAVEIEGSHFWDGGYSGNPAIHPLIYHCNSRD
IVLVQINPIKRESLPTNANEIMDRINEITFNAGLIAEMRAIDFVKRLLAEGKLDPGHYKNVLMHRVDGGEALERFTASTK
SSTEASLIHGLRDLGVRCGKEWLDKHYPALGVKDSVNIARDYLDDLRMPVTNANGQPAHPERPQAVEASERGKPATLPPV
STGAVKVSAPVQAPAPAPAARKTVRHKIRSVLDNYLHKLKKRKG

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48040; Mature: 48040

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNVTTIAPCRVNLALQGGGSHGAFTWGVLDALLEDGRIDIEGMSGTSAGAMNAVALAHG
CCCCCEEECEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHC
FAGAEGKSRVQQHDAAREALASFWNGIVNMGALSSSMSKMQRAPFDILFGHMTMGTSAGP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHHCCCCCCC
SRLWTDAMTRYWANTLSPYQSNPFDINPLRKFLEGQVDFERLAAARDPGTPKVFVVATRV
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEEEEEC
SSGKAEVFSGKRLTASAVMASACLPMVFQAVEIEGSHFWDGGYSGNPAIHPLIYHCNSRD
CCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHEECCCEEECCCCCCCCCCCEEEEEECCCC
IVLVQINPIKRESLPTNANEIMDRINEITFNAGLIAEMRAIDFVKRLLAEGKLDPGHYKN
EEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
VLMHRVDGGEALERFTASTKSSTEASLIHGLRDLGVRCGKEWLDKHYPALGVKDSVNIAR
HHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
DYLDDLRMPVTNANGQPAHPERPQAVEASERGKPATLPPVSTGAVKVSAPVQAPAPAPAA
HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEECCCCCCCCCHHH
RKTVRHKIRSVLDNYLHKLKKRKG
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNNVTTIAPCRVNLALQGGGSHGAFTWGVLDALLEDGRIDIEGMSGTSAGAMNAVALAHG
CCCCCEEECEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHC
FAGAEGKSRVQQHDAAREALASFWNGIVNMGALSSSMSKMQRAPFDILFGHMTMGTSAGP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHHCCCCCCC
SRLWTDAMTRYWANTLSPYQSNPFDINPLRKFLEGQVDFERLAAARDPGTPKVFVVATRV
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEEEEEC
SSGKAEVFSGKRLTASAVMASACLPMVFQAVEIEGSHFWDGGYSGNPAIHPLIYHCNSRD
CCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHEECCCEEECCCCCCCCCCCEEEEEECCCC
IVLVQINPIKRESLPTNANEIMDRINEITFNAGLIAEMRAIDFVKRLLAEGKLDPGHYKN
EEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
VLMHRVDGGEALERFTASTKSSTEASLIHGLRDLGVRCGKEWLDKHYPALGVKDSVNIAR
HHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
DYLDDLRMPVTNANGQPAHPERPQAVEASERGKPATLPPVSTGAVKVSAPVQAPAPAPAA
HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEECCCCCCCCCHHH
RKTVRHKIRSVLDNYLHKLKKRKG
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA