Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789455

Identifier: 91789455

GI number: 91789455

Start: 3805910

End: 3806242

Strand: Direct

Name: 91789455

Synonym: Bpro_3604

Alternate gene names: NA

Gene position: 3805910-3806242 (Clockwise)

Preceding gene: 91789454

Following gene: 91789456

Centisome position: 73.19

GC content: 56.46

Gene sequence:

>333_bases
ATGATTGGCATGGAAGCCCCTGACGTTTTGCTCGATGAGCGCTCCCTGAGCAAGCTCAAGTGGCGCTGCCGCCGGGGCCT
GCTGGAAAACGATCTGCTGATCGAAAAGTTCTTTGCCCGCCACGAAGCGACGCTCAGCGTCAGGCAGGCTAAAGGCTTGA
ATGATTTAATGGACTTGTCCGACAACGATTTGCTGGACCTGCTGTTAAAACGTCGGGAACCTGATCAGCTTCCCGATGCC
GATGCGTTGGCAAGCGCCTCTACTTCCGAAGCGCTTGAGGTTTTAAACTTGCTGCGTACCGCAGCGGCCGGCCGCGTGGC
TGTTTCCATGTGA

Upstream 100 bases:

>100_bases
AACTGCGTCGATGTCTGCCCCAAGGGCCTGAACCCGACCCGGGCCATTGGCAAGATCAAGGAAATGATGGTCCTGCGCGC
AGTCTGATCAATTATTTGGC

Downstream 100 bases:

>100_bases
TTTGATACGAAAGAAGCGAGAAATGAAGCTAGCTGACAACAAAGCCACCCTGTCCTTCAGCAACGGCAGCCCGAGCGTCG
ATTTGCCCGTTTACCACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MIGMEAPDVLLDERSLSKLKWRCRRGLLENDLLIEKFFARHEATLSVRQAKGLNDLMDLSDNDLLDLLLKRREPDQLPDA
DALASASTSEALEVLNLLRTAAAGRVAVSM

Sequences:

>Translated_110_residues
MIGMEAPDVLLDERSLSKLKWRCRRGLLENDLLIEKFFARHEATLSVRQAKGLNDLMDLSDNDLLDLLLKRREPDQLPDA
DALASASTSEALEVLNLLRTAAAGRVAVSM
>Mature_110_residues
MIGMEAPDVLLDERSLSKLKWRCRRGLLENDLLIEKFFARHEATLSVRQAKGLNDLMDLSDNDLLDLLLKRREPDQLPDA
DALASASTSEALEVLNLLRTAAAGRVAVSM

Specific function: Unknown

COG id: COG2938

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12246; Mature: 12246

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGMEAPDVLLDERSLSKLKWRCRRGLLENDLLIEKFFARHEATLSVRQAKGLNDLMDLS
CCCCCCCHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
DNDLLDLLLKRREPDQLPDADALASASTSEALEVLNLLRTAAAGRVAVSM
CCHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCEECC
>Mature Secondary Structure
MIGMEAPDVLLDERSLSKLKWRCRRGLLENDLLIEKFFARHEATLSVRQAKGLNDLMDLS
CCCCCCCHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
DNDLLDLLLKRREPDQLPDADALASASTSEALEVLNLLRTAAAGRVAVSM
CCHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA