| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91789400
Identifier: 91789400
GI number: 91789400
Start: 3746520
End: 3747077
Strand: Direct
Name: 91789400
Synonym: Bpro_3546
Alternate gene names: NA
Gene position: 3746520-3747077 (Clockwise)
Preceding gene: 91789394
Following gene: 91789403
Centisome position: 72.04
GC content: 65.05
Gene sequence:
>558_bases ATGAACACAAAGACCCCACAAGACACGTTGACACAATGGCAGGAACAAAGCGCAGCCGTGCGCGCCCGCATGCTGGCGGG CGGTGGCAAGCCAGGCCTTGCCGGCCCCGAACAGGTGGCGGGCAAGACCGGCATGGAGGTGATGCAGGCCATGCTGGCCG GTGAGTTTCCCTACCCCCACATTGCGGAAACGCTGGACTTCGCGCTGATTGAGGTGGAGCCCGGAAAAGCCATCTTCCAG GGAACGCCGCAGCTCAAGCACTACAACCCGCTGGGTACGGTGCATGGCGGCTGGTACGCCACGCTGCTCGATTCAGCCGT AGGCTGCGCCGTGCACACCATGATGCCCGCAGGGCGGGCCTACACGACGGCCGAGTTGAGCCTCAACATTGTGCGGGCAG CGTCGCACCAATCCGGGCCGCTGCGTGCCATCGGCACCGTCATCCACTGCGGCAGGCAACTCGCCACGGCCGAGGGCCGC ATCGTCGGGCCGGACGGCAAGCTGTATGCGCATGCCACGACAACCTGCCTGGTCTTTGAGCTGCCGAAGTTGGGGTAA
Upstream 100 bases:
>100_bases GGTTGGTGCAACCCTGGGCTTTCAATTCGGCTTCGATTGACAGGGATGATTTATCGCTCATAATTTGATTGTACCTACAA TTATTGCATATACAAATTAA
Downstream 100 bases:
>100_bases CCCGGGCGAACCGGGCGAAGCGCGGCTGGGCAAAAGAAAATCAGGAGGTCGACTTGTCTGCGCCCTGCTTCAGTCTTGCC AGGAAAGGCGTCAACAGATC
Product: phenylacetic acid degradation-like protein
Products: NA
Alternate protein names: Phenylacetic Acid Degradation-Related Protein; Thioesterase Family Protein; Thioesterase; Phenylacetic Acid Degradation-Like Protein; Aromatic Compounds Catabolic Protein; PaaI Thioesterase; Aromatic Compounds Degradation Protein PaaI; Domain 1 Protein; Protein Involved In Aromatic Compounds Catabolism; Orf_Bo
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MNTKTPQDTLTQWQEQSAAVRARMLAGGGKPGLAGPEQVAGKTGMEVMQAMLAGEFPYPHIAETLDFALIEVEPGKAIFQ GTPQLKHYNPLGTVHGGWYATLLDSAVGCAVHTMMPAGRAYTTAELSLNIVRAASHQSGPLRAIGTVIHCGRQLATAEGR IVGPDGKLYAHATTTCLVFELPKLG
Sequences:
>Translated_185_residues MNTKTPQDTLTQWQEQSAAVRARMLAGGGKPGLAGPEQVAGKTGMEVMQAMLAGEFPYPHIAETLDFALIEVEPGKAIFQ GTPQLKHYNPLGTVHGGWYATLLDSAVGCAVHTMMPAGRAYTTAELSLNIVRAASHQSGPLRAIGTVIHCGRQLATAEGR IVGPDGKLYAHATTTCLVFELPKLG >Mature_185_residues MNTKTPQDTLTQWQEQSAAVRARMLAGGGKPGLAGPEQVAGKTGMEVMQAMLAGEFPYPHIAETLDFALIEVEPGKAIFQ GTPQLKHYNPLGTVHGGWYATLLDSAVGCAVHTMMPAGRAYTTAELSLNIVRAASHQSGPLRAIGTVIHCGRQLATAEGR IVGPDGKLYAHATTTCLVFELPKLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19549; Mature: 19549
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKTPQDTLTQWQEQSAAVRARMLAGGGKPGLAGPEQVAGKTGMEVMQAMLAGEFPYPH CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHCCCCCCH IAETLDFALIEVEPGKAIFQGTPQLKHYNPLGTVHGGWYATLLDSAVGCAVHTMMPAGRA HHHHHCEEEEEECCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC YTTAELSLNIVRAASHQSGPLRAIGTVIHCGRQLATAEGRIVGPDGKLYAHATTTCLVFE EEEHHHEEEEEEECCCCCCCHHHHHHHHHHCHHHHCCCCEEECCCCCEEEEEEEEEEEEE LPKLG CCCCC >Mature Secondary Structure MNTKTPQDTLTQWQEQSAAVRARMLAGGGKPGLAGPEQVAGKTGMEVMQAMLAGEFPYPH CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHCCCCCCH IAETLDFALIEVEPGKAIFQGTPQLKHYNPLGTVHGGWYATLLDSAVGCAVHTMMPAGRA HHHHHCEEEEEECCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC YTTAELSLNIVRAASHQSGPLRAIGTVIHCGRQLATAEGRIVGPDGKLYAHATTTCLVFE EEEHHHEEEEEEECCCCCCCHHHHHHHHHHCHHHHCCCCEEECCCCCEEEEEEEEEEEEE LPKLG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA