Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91789399

Identifier: 91789399

GI number: 91789399

Start: 3745995

End: 3746480

Strand: Reverse

Name: 91789399

Synonym: Bpro_3545

Alternate gene names: NA

Gene position: 3746480-3745995 (Counterclockwise)

Preceding gene: 91789401

Following gene: 91789398

Centisome position: 72.04

GC content: 60.29

Gene sequence:

>486_bases
ATGAGCGATAAATCATCCCTGTCAATCGAAGCCGAATTGAAAGCCCAGGGTTGCACCAACCTGAGGCTGCGCCAGCTGAT
GCGGCGCGTGGCCCAGCACTATGACCTTGAAATGGCCAAGGCGGGGCTCAAGACCACGCAGTACTCGCTGCTGAGCCATG
TTTTGAAACTAGGCCCCCTGCGTCCCGGTGAACTGGCGCAGAGCATGAAGTTCAGTGCCTCCACTCTCACGCGCAACCTC
AAGCCGCTGATTGACGCGGGCTGGGTCGAGCTGGCGGCCGGCACCGATGCGCGCAGCCGCATTGTGACCATCACGCCGGC
AGGTCGCGCCAAACGTGAAGAGGCCCGCCTGCGCTGGAAGGTCGCGCAGGAAAGCCTGAACCAGCGGTTGGGCGTCGCAC
GTGTGCTGGCCTTGCACCGGCTGATCAATGAATCGCTTGAACTCTTGTCTCCCACTGAACCTGGAACTGGAACTGATGAT
GAATAA

Upstream 100 bases:

>100_bases
GCACGGCTGCGCTTTGTTCCTGCCATTGTGTCAACGTGTCTTGTGGGGTCTTTGTGTTCATTTAATTTGTATATGCAATA
ATTGTAGGTACAATCAAATT

Downstream 100 bases:

>100_bases
GCCCCAAACCGCTGGCCCGCGCAAGGCCGCACTCTGGCTGGTGCTGCTGGCAGCCGGCGGCGCCTTTGCCCTGACGATGG
GTGTGCGCCAGACCATGGGC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Regulatory Protein MarR; Transcriptional Regulator; MarR-Family Transcriptional Regulator; Transcription Regulator Protein; MarR Family Regulatory Helix-Turn-Helix Protein; Transcriptional Regulator Marr Family

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MSDKSSLSIEAELKAQGCTNLRLRQLMRRVAQHYDLEMAKAGLKTTQYSLLSHVLKLGPLRPGELAQSMKFSASTLTRNL
KPLIDAGWVELAAGTDARSRIVTITPAGRAKREEARLRWKVAQESLNQRLGVARVLALHRLINESLELLSPTEPGTGTDD
E

Sequences:

>Translated_161_residues
MSDKSSLSIEAELKAQGCTNLRLRQLMRRVAQHYDLEMAKAGLKTTQYSLLSHVLKLGPLRPGELAQSMKFSASTLTRNL
KPLIDAGWVELAAGTDARSRIVTITPAGRAKREEARLRWKVAQESLNQRLGVARVLALHRLINESLELLSPTEPGTGTDD
E
>Mature_160_residues
SDKSSLSIEAELKAQGCTNLRLRQLMRRVAQHYDLEMAKAGLKTTQYSLLSHVLKLGPLRPGELAQSMKFSASTLTRNLK
PLIDAGWVELAAGTDARSRIVTITPAGRAKREEARLRWKVAQESLNQRLGVARVLALHRLINESLELLSPTEPGTGTDDE

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17801; Mature: 17670

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKSSLSIEAELKAQGCTNLRLRQLMRRVAQHYDLEMAKAGLKTTQYSLLSHVLKLGPL
CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHCCC
RPGELAQSMKFSASTLTRNLKPLIDAGWVELAAGTDARSRIVTITPAGRAKREEARLRWK
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCEEEEECCCCCCHHHHHHHHHH
VAQESLNQRLGVARVLALHRLINESLELLSPTEPGTGTDDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SDKSSLSIEAELKAQGCTNLRLRQLMRRVAQHYDLEMAKAGLKTTQYSLLSHVLKLGPL
CCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHCCC
RPGELAQSMKFSASTLTRNLKPLIDAGWVELAAGTDARSRIVTITPAGRAKREEARLRWK
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCEEEEECCCCCCHHHHHHHHHH
VAQESLNQRLGVARVLALHRLINESLELLSPTEPGTGTDDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA